FFCP PHASE1:Mm9::chr11:42134519..42134541,-: Difference between revisions
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{{FFCP|EntrezGene=14399|HGNC=|MCL_coexpression_id=30|UniProt=P16305,Q5SUU4|association_with_transcript=9bp_to_ENSMUST00000020703_5end|description=CAGE_peak_2_at_Gabra6_5end|id=chr11:42134519..42134541,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,1.59e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004733!3.93e-22!6;UBERON:0004732!3.93e-22!6;UBERON:0002028!3.93e-22!6;UBERON:0007277!3.93e-22!6;UBERON:0001896!5.72e-17!2;UBERON:0005290!5.72e-17!2;UBERON:0010096!5.72e-17!2;UBERON:0002298!9.15e-13!6;UBERON:0003076!3.00e-11!12;UBERON:0003057!3.00e-11!12;UBERON:0002037!2.53e-09!4;UBERON:0002680!2.53e-09!4;UBERON:0001895!2.53e-09!4;UBERON:0010092!2.53e-09!4;UBERON:0006215!2.53e-09!4;UBERON:0002616!1.03e-07!49;UBERON:0000033!1.25e-07!63;UBERON:0000955!1.50e-07!50;UBERON:0006238!1.50e-07!50;UBERON:0001049!3.05e-07!52;UBERON:0005068!3.05e-07!52;UBERON:0006241!3.05e-07!52;UBERON:0007135!3.05e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.55e-23,4;UBERON:0002680,6.55e-23,4;UBERON:0001895,6.55e-23,4;UBERON:0010092,6.55e-23,4;UBERON:0006215,6.55e-23,4;UBERON:0004733,1.13e-15,6;UBERON:0004732,1.13e-15,6;UBERON:0002028,1.13e-15,6;UBERON:0007277,1.13e-15,6;UBERON:0002038,1.59e-08,3;UBERON:0009663,1.59e-08,3;UBERON:0009661,1.59e-08,3;UBERON:0000125,1.59e-08,3;UBERON:0002308,1.59e-08,3;UBERON:0003076,2.25e-08,12;UBERON:0003057,2.25e-08,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54833334163237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37548997004143,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,140.242001768531,147.450481596672,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Gabra6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14399 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=P16305,Q5SUU4 | |||
|association_with_transcript=9bp_to_ENSMUST00000020703_5end | |||
|cluster_id=chr11:42134519..42134541,- | |||
|description=CAGE_peak_2_at_Gabra6_5end | |||
|id=chr11:42134519..42134541,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.59e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!3.93e-22!6;UBERON:0004732!3.93e-22!6;UBERON:0002028!3.93e-22!6;UBERON:0007277!3.93e-22!6;UBERON:0001896!5.72e-17!2;UBERON:0005290!5.72e-17!2;UBERON:0010096!5.72e-17!2;UBERON:0002298!9.15e-13!6;UBERON:0003076!3.00e-11!12;UBERON:0003057!3.00e-11!12;UBERON:0002037!2.53e-09!4;UBERON:0002680!2.53e-09!4;UBERON:0001895!2.53e-09!4;UBERON:0010092!2.53e-09!4;UBERON:0006215!2.53e-09!4;UBERON:0002616!1.03e-07!49;UBERON:0000033!1.25e-07!63;UBERON:0000955!1.50e-07!50;UBERON:0006238!1.50e-07!50;UBERON:0001049!3.05e-07!52;UBERON:0005068!3.05e-07!52;UBERON:0006241!3.05e-07!52;UBERON:0007135!3.05e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.55e-23,4;UBERON:0002680,6.55e-23,4;UBERON:0001895,6.55e-23,4;UBERON:0010092,6.55e-23,4;UBERON:0006215,6.55e-23,4;UBERON:0004733,1.13e-15,6;UBERON:0004732,1.13e-15,6;UBERON:0002028,1.13e-15,6;UBERON:0007277,1.13e-15,6;UBERON:0002038,1.59e-08,3;UBERON:0009663,1.59e-08,3;UBERON:0009661,1.59e-08,3;UBERON:0000125,1.59e-08,3;UBERON:0002308,1.59e-08,3;UBERON:0003076,2.25e-08,12;UBERON:0003057,2.25e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54833334163237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37548997004143,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,140.242001768531,147.450481596672,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Gabra6 | |||
}} |
Latest revision as of 12:28, 1 October 2015
Short description: | p2@Gabra6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gabra6_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 9bp_to_ENSMUST00000020703_5end |
EntrezGene: | Gabra6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.59e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.55e-23 | 4 |
regional part of metencephalon | 6.55e-23 | 4 |
metencephalon | 6.55e-23 | 4 |
future metencephalon | 6.55e-23 | 4 |
rhombic lip | 6.55e-23 | 4 |
segmental subdivision of hindbrain | 1.13e-15 | 6 |
segmental subdivision of nervous system | 1.13e-15 | 6 |
hindbrain | 1.13e-15 | 6 |
presumptive hindbrain | 1.13e-15 | 6 |
substantia nigra | 1.59e-08 | 3 |
telencephalic nucleus | 1.59e-08 | 3 |
midbrain nucleus | 1.59e-08 | 3 |
neural nucleus | 1.59e-08 | 3 |
nucleus of brain | 1.59e-08 | 3 |
posterior neural tube | 2.25e-08 | 12 |
chordal neural plate | 2.25e-08 | 12 |