FFCP PHASE1:Mm9::chr18:60371743..60371776,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=240327 | |EntrezGene=240327 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1289 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UED7 | |UniProt=Q3UED7 | ||
|association_with_transcript=9bp_to_ENSMUST00000031549_5end | |association_with_transcript=9bp_to_ENSMUST00000031549_5end | ||
|cluster_id=chr18:60371743..60371776,+ | |||
|description=CAGE_peak_2_at_Gm4951_5end | |description=CAGE_peak_2_at_Gm4951_5end | ||
|id=chr18:60371743..60371776,+ | |id=chr18:60371743..60371776,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.54e-13,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!1.29e-11!25;UBERON:0002330!1.29e-11!25;UBERON:0002107!2.90e-11!22;UBERON:0007499!2.90e-11!22;UBERON:0006925!2.90e-11!22;UBERON:0009497!2.90e-11!22;UBERON:0000015!2.90e-11!22;UBERON:0002423!2.90e-11!22;UBERON:0006235!2.90e-11!22;UBERON:0008835!2.90e-11!22;UBERON:0003894!2.90e-11!22;UBERON:0004161!2.90e-11!22;UBERON:0008836!2.90e-11!22;UBERON:0009854!2.40e-10!23;UBERON:0009856!2.40e-10!23;UBERON:0005057!6.43e-10!51;UBERON:0002405!1.03e-09!70;UBERON:0000926!3.22e-09!193;UBERON:0004120!3.22e-09!193;UBERON:0006603!3.22e-09!193;UBERON:0005172!6.70e-09!49;UBERON:0005173!6.70e-09!49;UBERON:0002417!6.70e-09!49;UBERON:0000916!6.70e-09!49;UBERON:0000077!1.31e-08!97;UBERON:0001041!2.60e-08!92;UBERON:0003914!2.91e-08!47;UBERON:0003104!1.11e-07!131;UBERON:0009142!1.11e-07!131;UBERON:0009569!2.64e-07!66;UBERON:0005256!5.85e-07!47;UBERON:0002368!6.23e-07!60;UBERON:0002530!8.55e-07!65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,5.73e-33,25;UBERON:0002330,5.73e-33,25;UBERON:0002107,1.74e-30,22;UBERON:0007499,1.74e-30,22;UBERON:0006925,1.74e-30,22;UBERON:0009497,1.74e-30,22;UBERON:0000015,1.74e-30,22;UBERON:0002423,1.74e-30,22;UBERON:0006235,1.74e-30,22;UBERON:0008835,1.74e-30,22;UBERON:0003894,1.74e-30,22;UBERON:0004161,1.74e-30,22;UBERON:0008836,1.74e-30,22;UBERON:0009854,5.61e-29,23;UBERON:0009856,5.61e-29,23;UBERON:0005172,2.10e-14,49;UBERON:0005173,2.10e-14,49;UBERON:0002417,2.10e-14,49;UBERON:0000916,2.10e-14,49;UBERON:0005256,2.18e-14,45;UBERON:0003914,1.17e-13,47;UBERON:0002530,2.03e-12,65;UBERON:0003929,4.27e-11,55;UBERON:0002368,4.75e-11,60;UBERON:0000949,1.42e-10,72;UBERON:0009569,1.56e-09,66;UBERON:0003104,1.72e-09,61;UBERON:0009142,1.72e-09,61;UBERON:0005177,4.13e-09,79;UBERON:0001041,4.37e-09,80;UBERON:0000490,1.53e-08,66;UBERON:0005911,5.46e-08,69;UBERON:0002100,2.05e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,1.42035655785734,0,0,0,0,0.171200729931206,0.524522414513984,0.333109761815663,0.404950534779652,0,0.315462165358238,0.548457734422955,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405507724878058,0,2.34717403304412,0,0,0,0.279972843250725,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0.449949858640699,0,1.4209602298922,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0,0,34.204009666798,22.371020801516,1.3599426674155,12.4131734076698,24.0417274455638,14.3368603871147,6.88177658645584,0,0.259786004602869,0,0,5.13305909657271,0,0,0,0,0,9.59144589640104,4.14300613835475,1.33597925158342,0,0,0.230615497256059,0.150722640552623,0.470354828542819,0.125666591329675,0,2.31358971071859,0.884610551949874,0.323533699894818,0,0.484875253135222,0,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0,0.347648640384553,0,0.20778804455956,0.162241263067758,0.509196819251581,0.373220911830279,0.505445516867349,0,0,0,0.180062129805349,0,0.136072998302656,0.384341160854549,0.0937017245597288,0,0,0,0,0,0,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0.162137619091711,0.584799949701329,0.658650345873152,0.402619256281115,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.58489226135736,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.140271639780637,0.189709611372772,0.295220295959204,0,0.493588655687202,12.1545577105731,0.166845105716094,0,0,0.202860121388503,0.241177159752417,1.2731292589071,3.45235364940973,2.2698931748505,2.47105271869273,17.2521847832825,10.0478055870496,6.86482880852033,9.09283960609602,13.0960111870996,10.6137574699941,0.554259570499814,0,0.325929952884052,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0.159454768657487,0.163863314715738,0.863424909329478,0.433947175744535,6.03165135757089,4.89515115436839,2.95058563811422,1.37968373152366,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0.425820255624806,0.178065603667255,0.325773918707152,2.14461159864296,0,0,0,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,1.03135543248187,0,0,0.129358683782755,0,0,0,0.493647061806363,0,0.23467170806371,0.21183207086382,0,0.65954501176592,0.322928853391811,0.120625849856312,0.119372344003136,0.164140899745061,0,0.370850604021019,0.683483523191411,0,1.11116716421827,0,0.820165366326151,0.915112692826091,0,0,0.138199973804424,1.90934123603023,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,1.07449492442937,0.523511883968059,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0.241584120826006,0.288030006257865,0.632022241256357,0,0.308132871494482,0.77952493786677,0,0.39736270956253,0.480781798079875,0.295379054349154,0.403865799792591,0,0.201652370273681,0.38983152295901,0.0962118416403295,0.935015217452552,0.453460767230423,0,0,0,0.386379188064381,0.750729901804728,1.09890974560359,0.214368379079066,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.666740183404846,0.206035057238894,0,0.758091635291392,0.50695859978048,0.565879024158229,0.468207537349412,0.0640251524048693,0.516919220600519,0.476293691283074,0.347652977834566,0.578727661391115,0,0,1.02860775715625,0.177475806159338,0.238436189947321,0.581385666529314,0.564656282491984,0.25384382367503,0,0.789209134313529,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.859484216193193,0.382576664137687,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,1.42035655785734,0,0,0,0,0.171200729931206,0.524522414513984,0.333109761815663,0.404950534779652,0,0.315462165358238,0.548457734422955,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405507724878058,0,2.34717403304412,0,0,0,0.279972843250725,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0.449949858640699,0,1.4209602298922,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0,0,34.204009666798,22.371020801516,1.3599426674155,12.4131734076698,24.0417274455638,14.3368603871147,6.88177658645584,0,0.259786004602869,0,0,5.13305909657271,0,0,0,0,0,9.59144589640104,4.14300613835475,1.33597925158342,0,0,0.230615497256059,0.150722640552623,0.470354828542819,0.125666591329675,0,2.31358971071859,0.884610551949874,0.323533699894818,0,0.484875253135222,0,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0,0.347648640384553,0,0.20778804455956,0.162241263067758,0.509196819251581,0.373220911830279,0.505445516867349,0,0,0,0.180062129805349,0,0.136072998302656,0.384341160854549,0.0937017245597288,0,0,0,0,0,0,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0.162137619091711,0.584799949701329,0.658650345873152,0.402619256281115,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.58489226135736,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.140271639780637,0.189709611372772,0.295220295959204,0,0.493588655687202,12.1545577105731,0.166845105716094,0,0,0.202860121388503,0.241177159752417,1.2731292589071,3.45235364940973,2.2698931748505,2.47105271869273,17.2521847832825,10.0478055870496,6.86482880852033,9.09283960609602,13.0960111870996,10.6137574699941,0.554259570499814,0,0.325929952884052,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0.159454768657487,0.163863314715738,0.863424909329478,0.433947175744535,6.03165135757089,4.89515115436839,2.95058563811422,1.37968373152366,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0.425820255624806,0.178065603667255,0.325773918707152,2.14461159864296,0,0,0,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,1.03135543248187,0,0,0.129358683782755,0,0,0,0.493647061806363,0,0.23467170806371,0.21183207086382,0,0.65954501176592,0.322928853391811,0.120625849856312,0.119372344003136,0.164140899745061,0,0.370850604021019,0.683483523191411,0,1.11116716421827,0,0.820165366326151,0.915112692826091,0,0,0.138199973804424,1.90934123603023,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,1.07449492442937,0.523511883968059,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0.241584120826006,0.288030006257865,0.632022241256357,0,0.308132871494482,0.77952493786677,0,0.39736270956253,0.480781798079875,0.295379054349154,0.403865799792591,0,0.201652370273681,0.38983152295901,0.0962118416403295,0.935015217452552,0.453460767230423,0,0,0,0.386379188064381,0.750729901804728,1.09890974560359,0.214368379079066,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.666740183404846,0.206035057238894,0,0.758091635291392,0.50695859978048,0.565879024158229,0.468207537349412,0.0640251524048693,0.516919220600519,0.476293691283074,0.347652977834566,0.578727661391115,0,0,1.02860775715625,0.177475806159338,0.238436189947321,0.581385666529314,0.564656282491984,0.25384382367503,0,0.789209134313529,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.859484216193193,0.382576664137687,0.220591419119515,0.231867835620421 | ||
|short_description=p2@Gm4951 | |short_description=p2@Gm4951 | ||
}} | }} |
Latest revision as of 12:48, 1 October 2015
Short description: | p2@Gm4951 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm4951_5end |
Coexpression cluster: | MCL_coexpression_mm9:1289 |
Association with transcript: | 9bp_to_ENSMUST00000031549_5end |
EntrezGene: | Gm4951 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.54e-13 | 5 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 5.73e-33 | 25 |
exocrine system | 5.73e-33 | 25 |
liver | 1.74e-30 | 22 |
epithelial sac | 1.74e-30 | 22 |
digestive gland | 1.74e-30 | 22 |
epithelium of foregut-midgut junction | 1.74e-30 | 22 |
anatomical boundary | 1.74e-30 | 22 |
hepatobiliary system | 1.74e-30 | 22 |
foregut-midgut junction | 1.74e-30 | 22 |
hepatic diverticulum | 1.74e-30 | 22 |
liver primordium | 1.74e-30 | 22 |
septum transversum | 1.74e-30 | 22 |
liver bud | 1.74e-30 | 22 |
digestive tract diverticulum | 5.61e-29 | 23 |
sac | 5.61e-29 | 23 |
abdomen element | 2.10e-14 | 49 |
abdominal segment element | 2.10e-14 | 49 |
abdominal segment of trunk | 2.10e-14 | 49 |
abdomen | 2.10e-14 | 49 |
trunk mesenchyme | 2.18e-14 | 45 |
epithelial tube | 1.17e-13 | 47 |
gland | 2.03e-12 | 65 |
gut epithelium | 4.27e-11 | 55 |
endocrine gland | 4.75e-11 | 60 |
endocrine system | 1.42e-10 | 72 |
subdivision of trunk | 1.56e-09 | 66 |
mesenchyme | 1.72e-09 | 61 |
entire embryonic mesenchyme | 1.72e-09 | 61 |
trunk region element | 4.13e-09 | 79 |
foregut | 4.37e-09 | 80 |
unilaminar epithelium | 1.53e-08 | 66 |
endo-epithelium | 5.46e-08 | 69 |
trunk | 2.05e-07 | 90 |