FFCP PHASE1:Mm9::chr15:97835065..97835083,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12824 | |EntrezGene=12824 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=225 | |||
|TSSclassifier=NA | |||
|UniProt=P28481,D3Z7T2 | |UniProt=P28481,D3Z7T2 | ||
|association_with_transcript=0bp_to_ENSMUST00000088354,ENSMUST00000088359,ENSMUST00000131560_5end | |||
|cluster_id=chr15:97835065..97835083,- | |||
|description=CAGE_peak_1_at_Col2a1_5end | |||
|id=chr15:97835065..97835083,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000026!1.99e-08!13;UBERON:0004708!1.99e-08!13;UBERON:0002101!1.99e-08!13;UBERON:0004357!1.99e-08!13;UBERON:0009872!1.99e-08!13;UBERON:0004347!1.99e-08!13;UBERON:0005732!1.99e-08!13;UBERON:0005733!1.99e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000026,4.70e-11,12;UBERON:0004708,4.70e-11,12;UBERON:0002101,4.70e-11,12;UBERON:0004357,4.70e-11,12;UBERON:0004347,4.70e-11,12;UBERON:0005732,4.70e-11,12;UBERON:0005733,4.70e-11,12;UBERON:0010707,8.73e-10,13;UBERON:0003102,2.52e-07,22;UBERON:0002102,5.26e-07,7;UBERON:0004710,5.26e-07,7;UBERON:0005419,5.26e-07,7;UBERON:0005417,5.26e-07,7;UBERON:0005729,5.26e-07,7 | |||
|phase1_expression=1113.83523161384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,1.56478268869608,5.88667922227206,10.1055644057857,3.30530828426282,3.3596741190087,14.3752564364972,0,0,0,0,0,0,6.47412674750713,4.7609188134483,8.23980824558033,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0.299600110518405,1.92109152660777,3.83651565541367,2.56511282830212,1.68259969081106,10.5690864229407,2.65042249141936,1.46988959057945,1.0543001812006,1.83843757322004,0,0.127687338085188,0,6.3305418110493,3.56801810049398,8.33461392890816,0.558365998002762,0,0.15279824777681,3.24091444021034,4.55589378557129,3.16879057903011,0,0.151143120213571,0,0,0,0,0,0,19.1004411379183,0,0,0,489.430883723965,0,0,0,0,0,0,2.96878087269556,0,0,0.867426633830679,2.43572382649713,2.07553947530453,0,0.117588707135705,0,0.988779870937496,0,22.1152637987469,2598.29914385529,762.786604762199,959.568125954605,0,0.585561594023094,0.83778682725382,0,0,0,0.127070227073065,0,0.457500602818626,0,0,0,0,0,0,475.607848642386,0,2.73574412652416,21.4698730888461,8.73627996847197,5.04173963454978,10.7000420663358,18.9141467640691,20.8825364064305,31.0152708292702,7.76110112217047,41.1734866501729,124.999118990929,254.601276665234,443.652162433411,357.290715254893,569.04404009722,527.008051340743,1.39323986772945,0,0,0,9.11353399156208,11.2572508790926,4.50155153652537,5.91861838963026,1.77087808572663,6.17068451549513,0.465067889500816,6.17028823219124,0.116765342367169,0,0.820837320395476,0.405344047729279,0.292399974850665,0,0.402619256281115,0,1.85228302282712,0.991256348951394,0,2.77274725695804,1.16118335930219,5.67016829817211,0,0,0,0,0,0,0,0,0,0,0,1.70701110857774,2.28497025219458,2.25415471346161,1.4255592949172,1.55161989734101,1.33258057791605,0.0632365371242573,0,0,0,0,0.333690211432188,0.589676985339609,0,0.202860121388503,0,1.2731292589071,0,0,0,0,1.11642284300551,0,0,0,0,0,12.885416000393,4.07412441105065,7.80827394565865,1.64283173801951,1.00503754465089,10.2358765580986,16.9766273636285,3.94087860265477,5.53661724121937,10.0456504254217,6.06294264448231,8.80693407516067,0.289298117163023,0,0,0,0,0.321101179975584,0.35163505977661,0,120.176161349282,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,0,0.283880170416537,0.534196811001766,0,0,0,12.1390318077491,3.32555912661226,0.377210159511796,12.993283286754,0,0,0,0,0,0,0,0.340439605753788,117.579894402446,51.2260387779708,45.0107773566344,11.3497749531055,17.4801441250029,17.2776471632227,10.3518082698964,0.23467170806371,0.21183207086382,0,0,1.29171541356724,44.0284351975538,21.9645112965771,13.7878355785851,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,4.4287039101359,0.406638934253697,0.108005340821801,0,0,0,0,0,0,0,0,2.39226473670366,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,1.01362607645082,17.255440803691,0.129920822977795,7.87717460936918,5.56307793387542,0.480781798079875,0.295379054349154,1.81739609906666,0.990688486514998,0.907435666231565,0.487289403698762,0,0.116876902181569,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6999298811113,66.2381289845711,152.977310755704,293.672914218499,89.2952072795205,107.180765426358,17.1129980407244,10.7138229764225,11.2321723357135,17.6888048234658,13.1809235942925,11.5062068245506,16.9491128520487,14.5337095959053,12.3486258254569,16.1939855036245,17.7303018695629,15.4327376370964,14.835092428919,10.4511233295422,11.3146853287187,17.5701048097744,14.0677352068919,16.2787986628208,13.2694226385616,14.13063951791,18.8415812058956,12.6273461490165,15.75327720612,8.97827634652382,16.1343624648877,15.0711858034612,16.3692417267876,13.789378865551,365.750934420244,390.703743894947,234.399471662299,291.150278235444,1368.09415095637,1648.25908366102,946.48450500256 | |phase1_expression=1113.83523161384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,1.56478268869608,5.88667922227206,10.1055644057857,3.30530828426282,3.3596741190087,14.3752564364972,0,0,0,0,0,0,6.47412674750713,4.7609188134483,8.23980824558033,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0.299600110518405,1.92109152660777,3.83651565541367,2.56511282830212,1.68259969081106,10.5690864229407,2.65042249141936,1.46988959057945,1.0543001812006,1.83843757322004,0,0.127687338085188,0,6.3305418110493,3.56801810049398,8.33461392890816,0.558365998002762,0,0.15279824777681,3.24091444021034,4.55589378557129,3.16879057903011,0,0.151143120213571,0,0,0,0,0,0,19.1004411379183,0,0,0,489.430883723965,0,0,0,0,0,0,2.96878087269556,0,0,0.867426633830679,2.43572382649713,2.07553947530453,0,0.117588707135705,0,0.988779870937496,0,22.1152637987469,2598.29914385529,762.786604762199,959.568125954605,0,0.585561594023094,0.83778682725382,0,0,0,0.127070227073065,0,0.457500602818626,0,0,0,0,0,0,475.607848642386,0,2.73574412652416,21.4698730888461,8.73627996847197,5.04173963454978,10.7000420663358,18.9141467640691,20.8825364064305,31.0152708292702,7.76110112217047,41.1734866501729,124.999118990929,254.601276665234,443.652162433411,357.290715254893,569.04404009722,527.008051340743,1.39323986772945,0,0,0,9.11353399156208,11.2572508790926,4.50155153652537,5.91861838963026,1.77087808572663,6.17068451549513,0.465067889500816,6.17028823219124,0.116765342367169,0,0.820837320395476,0.405344047729279,0.292399974850665,0,0.402619256281115,0,1.85228302282712,0.991256348951394,0,2.77274725695804,1.16118335930219,5.67016829817211,0,0,0,0,0,0,0,0,0,0,0,1.70701110857774,2.28497025219458,2.25415471346161,1.4255592949172,1.55161989734101,1.33258057791605,0.0632365371242573,0,0,0,0,0.333690211432188,0.589676985339609,0,0.202860121388503,0,1.2731292589071,0,0,0,0,1.11642284300551,0,0,0,0,0,12.885416000393,4.07412441105065,7.80827394565865,1.64283173801951,1.00503754465089,10.2358765580986,16.9766273636285,3.94087860265477,5.53661724121937,10.0456504254217,6.06294264448231,8.80693407516067,0.289298117163023,0,0,0,0,0.321101179975584,0.35163505977661,0,120.176161349282,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,0,0.283880170416537,0.534196811001766,0,0,0,12.1390318077491,3.32555912661226,0.377210159511796,12.993283286754,0,0,0,0,0,0,0,0.340439605753788,117.579894402446,51.2260387779708,45.0107773566344,11.3497749531055,17.4801441250029,17.2776471632227,10.3518082698964,0.23467170806371,0.21183207086382,0,0,1.29171541356724,44.0284351975538,21.9645112965771,13.7878355785851,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,4.4287039101359,0.406638934253697,0.108005340821801,0,0,0,0,0,0,0,0,2.39226473670366,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,1.01362607645082,17.255440803691,0.129920822977795,7.87717460936918,5.56307793387542,0.480781798079875,0.295379054349154,1.81739609906666,0.990688486514998,0.907435666231565,0.487289403698762,0,0.116876902181569,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6999298811113,66.2381289845711,152.977310755704,293.672914218499,89.2952072795205,107.180765426358,17.1129980407244,10.7138229764225,11.2321723357135,17.6888048234658,13.1809235942925,11.5062068245506,16.9491128520487,14.5337095959053,12.3486258254569,16.1939855036245,17.7303018695629,15.4327376370964,14.835092428919,10.4511233295422,11.3146853287187,17.5701048097744,14.0677352068919,16.2787986628208,13.2694226385616,14.13063951791,18.8415812058956,12.6273461490165,15.75327720612,8.97827634652382,16.1343624648877,15.0711858034612,16.3692417267876,13.789378865551,365.750934420244,390.703743894947,234.399471662299,291.150278235444,1368.09415095637,1648.25908366102,946.48450500256 | ||
|short_description=p1@Col2a1 | |||
}} | }} |
Latest revision as of 12:51, 1 October 2015
Short description: | p1@Col2a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Col2a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:225 |
Association with transcript: | 0bp_to_ENSMUST00000088354, ENSMUST00000088359, ENSMUST00000131560_5end |
EntrezGene: | Col2a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
appendage | 4.70e-11 | 12 |
paired limb/fin | 4.70e-11 | 12 |
limb | 4.70e-11 | 12 |
paired limb/fin bud | 4.70e-11 | 12 |
limb bud | 4.70e-11 | 12 |
limb/fin field | 4.70e-11 | 12 |
limb field | 4.70e-11 | 12 |
appendage girdle complex | 8.73e-10 | 13 |
surface structure | 2.52e-07 | 22 |
forelimb | 5.26e-07 | 7 |
pectoral appendage | 5.26e-07 | 7 |
pectoral appendage bud | 5.26e-07 | 7 |
forelimb bud | 5.26e-07 | 7 |
forelimb/pectoral fin field | 5.26e-07 | 7 |