FFCP PHASE2:Mm9::chr15:99602962..99602973,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:71949 |HGNC= |TSSclassifier=NA |UniProt=uniprot:Q9D6K9 |association_with_transcript=-16bp_to_ENSMUST00000023762,NM_...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=71949 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q9D6K9 | ||
|association_with_transcript=-16bp_to_ENSMUST00000023762,NM_028015,uc007xqf.1,uc007xqg.1_5end | |association_with_transcript=-16bp_to_ENSMUST00000023762,NM_028015,uc007xqf.1,uc007xqg.1_5end | ||
|cluster_id=chr15:99602962..99602973,- | |cluster_id=chr15:99602962..99602973,- | ||
Latest revision as of 14:11, 1 October 2015
| Short description: | p4@Lass5 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Lass5_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -16bp_to_ENSMUST00000023762, NM_028015, uc007xqf.1, uc007xqg.1_5end |
| EntrezGene: | Lass5 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@Lass5 |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 3.02e-38 | 23 |
| neuroblast (sensu Vertebrata) | 3.02e-38 | 23 |
| neuron | 2.55e-26 | 33 |
| neuronal stem cell | 2.55e-26 | 33 |
| neuroblast | 2.55e-26 | 33 |
| electrically signaling cell | 2.55e-26 | 33 |
| electrically responsive cell | 4.34e-22 | 39 |
| electrically active cell | 4.34e-22 | 39 |
| striatum neuron | 3.45e-20 | 3 |
| neural cell | 6.38e-20 | 43 |
Showing 1 to 10 of 19 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of spinal cord | 1.45e-31 | 5 |
| gray matter of spinal cord | 1.45e-31 | 5 |
| spinal cord | 2.50e-26 | 6 |
| dorsal region element | 2.50e-26 | 6 |
| dorsum | 2.50e-26 | 6 |
| ventral horn of spinal cord | 1.72e-19 | 3 |
| gray matter | 2.88e-14 | 34 |
| dorsal horn of spinal cord | 9.45e-14 | 2 |
| posterior neural tube | 3.47e-13 | 12 |
| chordal neural plate | 3.47e-13 | 12 |
Showing 1 to 10 of 33 entries
