FFCP PHASE1:Mm9::chr13:40826119..40826131,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=21418 | |EntrezGene=21418 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BPN4 | |UniProt=Q8BPN4 | ||
|association_with_transcript=-307bp_to_NM_001122948,uc007qee.2_5end | |||
|cluster_id=chr13:40826119..40826131,- | |||
|description=CAGE_peak_7_at_Tfap2a_5end | |||
|id=chr13:40826119..40826131,- | |||
|ontology_enrichment_celltype=CL:0000107!1.85e-09!9;CL:0000221!2.41e-07!44;CL:0000133!2.41e-07!44;CL:0000540!7.53e-07!33;CL:0000047!7.53e-07!33;CL:0000031!7.53e-07!33;CL:0000404!7.53e-07!33;CL:0002319!7.70e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.71e-28,9;CL:0000540,2.70e-14,33;CL:0000047,2.70e-14,33;CL:0000031,2.70e-14,33;CL:0000404,2.70e-14,33;CL:0002319,3.22e-14,43;CL:0000221,7.94e-14,44;CL:0000133,7.94e-14,44;CL:0000393,1.07e-11,39;CL:0000211,1.07e-11,39;CL:0000120,1.03e-10,3;CL:0000217,1.35e-07,2;CL:0000328,1.35e-07,2;CL:0002573,1.35e-07,2;CL:0002376,1.35e-07,2;CL:0000218,1.35e-07,2;CL:0000692,1.35e-07,2;CL:0002377,1.35e-07,2;CL:0002375,1.35e-07,2;CL:0002321,1.44e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!3.01e-11!11;UBERON:0004121!5.72e-11!102;UBERON:0000924!5.72e-11!102;UBERON:0006601!5.72e-11!102;UBERON:0002410!1.85e-09!9;UBERON:0000489!1.81e-08!21;UBERON:0000020!9.10e-08!12;UBERON:0001032!9.10e-08!12;UBERON:0004456!9.10e-08!12;UBERON:0001444!1.30e-07!11;UBERON:0001008!2.60e-07!17;UBERON:0002113!4.15e-07!14;UBERON:0003918!4.15e-07!14;UBERON:0005095!4.15e-07!14;UBERON:0007687!4.15e-07!14;UBERON:0006554!7.48e-07!16;UBERON:0000970!9.09e-07!9;UBERON:0000019!9.09e-07!9;UBERON:0000047!9.09e-07!9;UBERON:0004088!9.09e-07!9;UBERON:0002104!9.09e-07!9;UBERON:0001456!9.09e-07!9;UBERON:0003072!9.09e-07!9;UBERON:0003071!9.09e-07!9;UBERON:0004128!9.09e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.26e-34,11;UBERON:0002410,2.71e-28,9;UBERON:0000970,5.43e-13,9;UBERON:0000019,5.43e-13,9;UBERON:0000047,5.43e-13,9;UBERON:0010312,5.43e-13,9;UBERON:0004088,5.43e-13,9;UBERON:0002104,5.43e-13,9;UBERON:0001456,5.43e-13,9;UBERON:0003072,5.43e-13,9;UBERON:0004128,5.43e-13,9;UBERON:0003071,5.43e-13,9;UBERON:0004121,1.21e-12,95;UBERON:0000924,1.21e-12,95;UBERON:0006601,1.21e-12,95;UBERON:0000011,6.11e-11,3;UBERON:0000013,8.91e-11,3;UBERON:0001444,1.62e-10,11;UBERON:0010313,8.59e-10,3;UBERON:0002342,8.59e-10,3;UBERON:0002005,8.59e-10,3;UBERON:0005428,8.59e-10,3;UBERON:0005062,8.59e-10,3;UBERON:0000020,1.38e-09,12;UBERON:0001032,1.38e-09,12;UBERON:0004456,1.38e-09,12;UBERON:0000033,8.43e-09,13;UBERON:0005085,8.43e-09,13;UBERON:0001016,7.26e-07,75 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,2.83243045203437,1.5869729378161,2.53532561402472,0,0,0,0,0,0.898800331555214,0.768436610643109,0,0,0,0.856952953211411,0,0,0,0,0,0,0,0.395658863190582,0.365950574409639,0.52091337055676,0,0,0,1.17851434189467,0.569486723196412,0.931997229126503,1.81742863999642,2.34271836331035,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0,0,0,1.04091196059682,0.304465478312141,0,0.452167921657868,0.23517741427141,0,0,0,0,0,0.220841518460394,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0.509196819251581,0.373220911830279,0.252722758433675,0.841767423545896,0.390361328888111,0,1.0803727788321,2.10986744970001,5.8511389270142,5.38077625196369,4.96619140166563,1.29351685369508,2.80238390812695,0.945530400839096,0.879755620819744,0.43839146485515,0.556094498451196,1.0447564995665,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758671603812327,0.571242563048644,1.1270773567308,0.407302655690628,0.193952487167626,0.561086559122548,0.189709611372772,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468846746368813,0.163934945376675,0,1.26203287766503,1.56175497718655,1.29254038639679,1.91175038362042,2.89638276307112,2.83076530788832,1.61924280669958,2.33804686329049,3.16230222357219,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.329098041204242,0,0.469343416127421,0.21183207086382,0.441056796109924,0.49465875882444,1.61464426695906,0.72375509913787,0.716234064018819,0.492422699235184,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.627264888043406,0,0.134864346384821,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0.629156066554265,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,1.3492355185943,0.399024873401031,1.19513524027894,0.243106717068294,0.628839487883947,0,0,0,0,0,0,0.188626341386076,0.37456602987953,0.128050304809739,0.17230640686684,0,0.231768651889711,0,0,0,0.342869252385415,0,0.238436189947321,0.436039249896986,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0.409231043169689,0.309873682371932,0.578719832943424,0.249810577937946,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,2.83243045203437,1.5869729378161,2.53532561402472,0,0,0,0,0,0.898800331555214,0.768436610643109,0,0,0,0.856952953211411,0,0,0,0,0,0,0,0.395658863190582,0.365950574409639,0.52091337055676,0,0,0,1.17851434189467,0.569486723196412,0.931997229126503,1.81742863999642,2.34271836331035,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0,0,0,1.04091196059682,0.304465478312141,0,0.452167921657868,0.23517741427141,0,0,0,0,0,0.220841518460394,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0.509196819251581,0.373220911830279,0.252722758433675,0.841767423545896,0.390361328888111,0,1.0803727788321,2.10986744970001,5.8511389270142,5.38077625196369,4.96619140166563,1.29351685369508,2.80238390812695,0.945530400839096,0.879755620819744,0.43839146485515,0.556094498451196,1.0447564995665,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758671603812327,0.571242563048644,1.1270773567308,0.407302655690628,0.193952487167626,0.561086559122548,0.189709611372772,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468846746368813,0.163934945376675,0,1.26203287766503,1.56175497718655,1.29254038639679,1.91175038362042,2.89638276307112,2.83076530788832,1.61924280669958,2.33804686329049,3.16230222357219,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.329098041204242,0,0.469343416127421,0.21183207086382,0.441056796109924,0.49465875882444,1.61464426695906,0.72375509913787,0.716234064018819,0.492422699235184,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.627264888043406,0,0.134864346384821,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0.629156066554265,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,1.3492355185943,0.399024873401031,1.19513524027894,0.243106717068294,0.628839487883947,0,0,0,0,0,0,0.188626341386076,0.37456602987953,0.128050304809739,0.17230640686684,0,0.231768651889711,0,0,0,0.342869252385415,0,0.238436189947321,0.436039249896986,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0.409231043169689,0.309873682371932,0.578719832943424,0.249810577937946,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0.231867835620421 | ||
|short_description=p7@Tfap2a | |||
}} | }} |
Latest revision as of 14:18, 1 October 2015
Short description: | p7@Tfap2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Tfap2a_5end |
Coexpression cluster: | NA |
Association with transcript: | -307bp_to_NM_001122948, uc007qee.2_5end |
EntrezGene: | Tfap2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.71e-28 | 9 |
neuron | 2.70e-14 | 33 |
neuronal stem cell | 2.70e-14 | 33 |
neuroblast | 2.70e-14 | 33 |
electrically signaling cell | 2.70e-14 | 33 |
neural cell | 3.22e-14 | 43 |
ectodermal cell | 7.94e-14 | 44 |
neurectodermal cell | 7.94e-14 | 44 |
electrically responsive cell | 1.07e-11 | 39 |
electrically active cell | 1.07e-11 | 39 |
granule cell | 1.03e-10 | 3 |
insulating cell | 1.35e-07 | 2 |
myelin accumulating cell | 1.35e-07 | 2 |
Schwann cell | 1.35e-07 | 2 |
non-myelinating Schwann cell | 1.35e-07 | 2 |
myelinating Schwann cell;;Schwann cell | 1.35e-07 | 2 |
terminal Schwann cell | 1.35e-07 | 2 |
immature Schwann cell | 1.35e-07 | 2 |
Schwann cell precursor | 1.35e-07 | 2 |
embryonic cell | 1.44e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 2.26e-34 | 11 |
autonomic nervous system | 2.71e-28 | 9 |
eye | 5.43e-13 | 9 |
camera-type eye | 5.43e-13 | 9 |
simple eye | 5.43e-13 | 9 |
immature eye | 5.43e-13 | 9 |
ocular region | 5.43e-13 | 9 |
visual system | 5.43e-13 | 9 |
face | 5.43e-13 | 9 |
optic cup | 5.43e-13 | 9 |
optic vesicle | 5.43e-13 | 9 |
eye primordium | 5.43e-13 | 9 |
ectoderm-derived structure | 1.21e-12 | 95 |
ectoderm | 1.21e-12 | 95 |
presumptive ectoderm | 1.21e-12 | 95 |
parasympathetic nervous system | 6.11e-11 | 3 |
sympathetic nervous system | 8.91e-11 | 3 |
subdivision of head | 1.62e-10 | 11 |
neural crest-derived structure | 8.59e-10 | 3 |
neural crest | 8.59e-10 | 3 |
enteric nervous system | 8.59e-10 | 3 |
vagal neural crest | 8.59e-10 | 3 |
neural fold | 8.59e-10 | 3 |
sense organ | 1.38e-09 | 12 |
sensory system | 1.38e-09 | 12 |
entire sense organ system | 1.38e-09 | 12 |
head | 8.43e-09 | 13 |
ectodermal placode | 8.43e-09 | 13 |
nervous system | 7.26e-07 | 75 |