FFCP PHASE1:Mm9::chr6:56312235..56312249,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18575 | |EntrezGene=18575 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt=Q64338,E9Q7V6,Q5D0E7,Q3USZ6 | |UniProt=Q64338,E9Q7V6,Q5D0E7,Q3USZ6 | ||
|association_with_transcript=136bp_to_ENSMUST00000044505,ENSMUST00000164037,ENSMUST00000166102,NM_001025568,NM_001159952,NM_001159953,uc009caz.2,uc009cbe.2,uc009cbh.2,uc012emk.1_5end | |association_with_transcript=136bp_to_ENSMUST00000044505,ENSMUST00000164037,ENSMUST00000166102,NM_001025568,NM_001159952,NM_001159953,uc009caz.2,uc009cbe.2,uc009cbh.2,uc012emk.1_5end | ||
|cluster_id=chr6:56312235..56312249,- | |||
|description=CAGE_peak_4_at_Pde1c_5end | |description=CAGE_peak_4_at_Pde1c_5end | ||
|id=chr6:56312235..56312249,- | |id=chr6:56312235..56312249,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.09e-09!18;UBERON:0000948!1.09e-09!18;UBERON:0005498!1.09e-09!18;UBERON:0004140!1.09e-09!18;UBERON:0009881!1.09e-09!18;UBERON:0004141!1.09e-09!18;UBERON:0003084!1.09e-09!18;UBERON:0007005!1.09e-09!18;UBERON:0004139!1.09e-09!18;UBERON:0004291!1.09e-09!18;UBERON:0003103!5.06e-09!43;UBERON:0000970!6.52e-08!9;UBERON:0000019!6.52e-08!9;UBERON:0000047!6.52e-08!9;UBERON:0004088!6.52e-08!9;UBERON:0002104!6.52e-08!9;UBERON:0001456!6.52e-08!9;UBERON:0003072!6.52e-08!9;UBERON:0003071!6.52e-08!9;UBERON:0004128!6.52e-08!9;UBERON:0004535!8.09e-08!23;UBERON:0001009!8.09e-08!23 | |ontology_enrichment_uberon=UBERON:0007100!1.09e-09!18;UBERON:0000948!1.09e-09!18;UBERON:0005498!1.09e-09!18;UBERON:0004140!1.09e-09!18;UBERON:0009881!1.09e-09!18;UBERON:0004141!1.09e-09!18;UBERON:0003084!1.09e-09!18;UBERON:0007005!1.09e-09!18;UBERON:0004139!1.09e-09!18;UBERON:0004291!1.09e-09!18;UBERON:0003103!5.06e-09!43;UBERON:0000970!6.52e-08!9;UBERON:0000019!6.52e-08!9;UBERON:0000047!6.52e-08!9;UBERON:0004088!6.52e-08!9;UBERON:0002104!6.52e-08!9;UBERON:0001456!6.52e-08!9;UBERON:0003072!6.52e-08!9;UBERON:0003071!6.52e-08!9;UBERON:0004128!6.52e-08!9;UBERON:0004535!8.09e-08!23;UBERON:0001009!8.09e-08!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.54e-27,18;UBERON:0000948,6.54e-27,18;UBERON:0005498,6.54e-27,18;UBERON:0004140,6.54e-27,18;UBERON:0009881,6.54e-27,18;UBERON:0004141,6.54e-27,18;UBERON:0003084,6.54e-27,18;UBERON:0007005,6.54e-27,18;UBERON:0004139,6.54e-27,18;UBERON:0004291,6.54e-27,18;UBERON:0004535,9.04e-21,23;UBERON:0001009,9.04e-21,23;UBERON:0004872,4.69e-14,33;UBERON:0003103,1.25e-12,43;UBERON:0010314,1.06e-11,92;UBERON:0003914,1.93e-09,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0.441737081903227,0.367472397644862,0.287536413054709,0,0,0,0,0.131886287730194,0,0,0,0,0,0.589257170947335,0.284743361598206,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0.323533699894818,0,0,0,0.878342391034642,1.46612694769419,0,0,0,0,0.449371918214468,0,0,0,0,0.41557608911912,0.162241263067758,0,0,0,0.210441855886474,1.95180664444056,1.37941262660084,1.26043490863744,0.60281927134286,0.748401490664606,0.768682321709099,0.843315521037559,0.776110112217047,0,0.189106080167819,0.527853372491847,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,0.23674473558521,0.983821158737019,1.69693824176116,2.55787339225449,1.07309360559848,3.15266424391358,3.29119699826961,4.26835406605648,3.97237166774693,3.21639972335731,2.19550115291051,1.34206418760372,0,0.102904612379284,0,0,0.213288250535234,0,0.257734922644187,0.605050573870028,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0.342745537829186,1.1270773567308,0.610953983535943,0,0.210407459670956,0.379419222745544,0.442830443938806,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,1.26203287766503,0.780877488593277,0.430846795465598,0,0.222798674082394,0.283076530788832,0.404810701674894,1.16902343164525,0.790575555893047,0.642642632843614,0,0,0.325773918707152,0,0,0.728341908464944,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0.680879211507576,1.26042765821917,0.258717367565509,0.643011105094777,0.177340233642274,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0.583353565032143,0,0,0,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0.39736270956253,0,0,0,0.0762068066549998,0.100826185136841,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0.419226325255965,0.183843508450014,0.44449345560323,0,0,0,0,0.754505365544305,0.187283014939765,0.576226371643824,0.459483751644906,0,0.115884325944855,0.192909220463705,0.824171801606613,0.588795680537589,0.685738504770831,0.177475806159338,0,0.436039249896986,0.376437521661322,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0.29551344712669,0.409231043169689,0,0.192906610981141,0.749431733813838,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0.441737081903227,0.367472397644862,0.287536413054709,0,0,0,0,0.131886287730194,0,0,0,0,0,0.589257170947335,0.284743361598206,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0.323533699894818,0,0,0,0.878342391034642,1.46612694769419,0,0,0,0,0.449371918214468,0,0,0,0,0.41557608911912,0.162241263067758,0,0,0,0.210441855886474,1.95180664444056,1.37941262660084,1.26043490863744,0.60281927134286,0.748401490664606,0.768682321709099,0.843315521037559,0.776110112217047,0,0.189106080167819,0.527853372491847,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,0.23674473558521,0.983821158737019,1.69693824176116,2.55787339225449,1.07309360559848,3.15266424391358,3.29119699826961,4.26835406605648,3.97237166774693,3.21639972335731,2.19550115291051,1.34206418760372,0,0.102904612379284,0,0,0.213288250535234,0,0.257734922644187,0.605050573870028,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0.342745537829186,1.1270773567308,0.610953983535943,0,0.210407459670956,0.379419222745544,0.442830443938806,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,1.26203287766503,0.780877488593277,0.430846795465598,0,0.222798674082394,0.283076530788832,0.404810701674894,1.16902343164525,0.790575555893047,0.642642632843614,0,0,0.325773918707152,0,0,0.728341908464944,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0.680879211507576,1.26042765821917,0.258717367565509,0.643011105094777,0.177340233642274,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0.583353565032143,0,0,0,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0.39736270956253,0,0,0,0.0762068066549998,0.100826185136841,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0.419226325255965,0.183843508450014,0.44449345560323,0,0,0,0,0.754505365544305,0.187283014939765,0.576226371643824,0.459483751644906,0,0.115884325944855,0.192909220463705,0.824171801606613,0.588795680537589,0.685738504770831,0.177475806159338,0,0.436039249896986,0.376437521661322,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0.29551344712669,0.409231043169689,0,0.192906610981141,0.749431733813838,0,0,0.191288332068843,0,0 | ||
|short_description=p4@Pde1c | |short_description=p4@Pde1c | ||
}} | }} |
Latest revision as of 14:23, 1 October 2015
Short description: | p4@Pde1c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pde1c_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 136bp_to_ENSMUST00000044505, ENSMUST00000164037, ENSMUST00000166102, NM_001025568, NM_001159952, NM_001159953, uc009caz.2, uc009cbe.2, uc009cbh.2, uc012emk.1_5end |
EntrezGene: | Pde1c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 6.54e-27 | 18 |
heart | 6.54e-27 | 18 |
primitive heart tube | 6.54e-27 | 18 |
primary heart field | 6.54e-27 | 18 |
anterior lateral plate mesoderm | 6.54e-27 | 18 |
heart tube | 6.54e-27 | 18 |
heart primordium | 6.54e-27 | 18 |
cardiac mesoderm | 6.54e-27 | 18 |
cardiogenic plate | 6.54e-27 | 18 |
heart rudiment | 6.54e-27 | 18 |
cardiovascular system | 9.04e-21 | 23 |
circulatory system | 9.04e-21 | 23 |
splanchnic layer of lateral plate mesoderm | 4.69e-14 | 33 |
compound organ | 1.25e-12 | 43 |
structure with developmental contribution from neural crest | 1.06e-11 | 92 |
epithelial tube | 1.93e-09 | 47 |