FFCP PHASE1:Mm9::chr6:72364347..72364382,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56316 | |EntrezGene=56316 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |MCL_coexpression_id=8 | ||
|TSSclassifier=NA | |||
|UniProt=B2RS80,Q9QYC7 | |UniProt=B2RS80,Q9QYC7 | ||
|association_with_transcript=20bp_to_NM_019802,uc009cio.1_5end | |association_with_transcript=20bp_to_NM_019802,uc009cio.1_5end | ||
|cluster_id=chr6:72364347..72364382,+ | |||
|description=CAGE_peak_2_at_Ggcx_5end | |description=CAGE_peak_2_at_Ggcx_5end | ||
|id=chr6:72364347..72364382,+ | |id=chr6:72364347..72364382,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!6.67e-16!25;UBERON:0002330!6.67e-16!25;UBERON:0005177!4.00e-15!85;UBERON:0000466!2.69e-14!79;UBERON:0002107!3.14e-14!22;UBERON:0007499!3.14e-14!22;UBERON:0006925!3.14e-14!22;UBERON:0009497!3.14e-14!22;UBERON:0000015!3.14e-14!22;UBERON:0002423!3.14e-14!22;UBERON:0006235!3.14e-14!22;UBERON:0008835!3.14e-14!22;UBERON:0003894!3.14e-14!22;UBERON:0004161!3.14e-14!22;UBERON:0008836!3.14e-14!22;UBERON:0009854!7.61e-14!23;UBERON:0009856!7.61e-14!23;UBERON:0002100!1.94e-13!98;UBERON:0009569!8.14e-13!66;UBERON:0004119!3.52e-11!130;UBERON:0000925!3.52e-11!130;UBERON:0006595!3.52e-11!130;UBERON:0001007!1.61e-10!128;UBERON:0001555!1.61e-10!128;UBERON:0007026!1.61e-10!128;UBERON:0004921!2.79e-10!126;UBERON:0004185!2.79e-10!126;UBERON:0005256!3.52e-10!47;UBERON:0005172!7.10e-09!49;UBERON:0005173!7.10e-09!49;UBERON:0002417!7.10e-09!49;UBERON:0000916!7.10e-09!49;UBERON:0000077!7.92e-09!97;UBERON:0003104!1.18e-08!131;UBERON:0009142!1.18e-08!131;UBERON:0001041!4.19e-08!92;UBERON:0005153!4.27e-07!17;UBERON:0005157!4.83e-07!27;UBERON:0000949!7.03e-07!72 | |ontology_enrichment_uberon=UBERON:0002365!6.67e-16!25;UBERON:0002330!6.67e-16!25;UBERON:0005177!4.00e-15!85;UBERON:0000466!2.69e-14!79;UBERON:0002107!3.14e-14!22;UBERON:0007499!3.14e-14!22;UBERON:0006925!3.14e-14!22;UBERON:0009497!3.14e-14!22;UBERON:0000015!3.14e-14!22;UBERON:0002423!3.14e-14!22;UBERON:0006235!3.14e-14!22;UBERON:0008835!3.14e-14!22;UBERON:0003894!3.14e-14!22;UBERON:0004161!3.14e-14!22;UBERON:0008836!3.14e-14!22;UBERON:0009854!7.61e-14!23;UBERON:0009856!7.61e-14!23;UBERON:0002100!1.94e-13!98;UBERON:0009569!8.14e-13!66;UBERON:0004119!3.52e-11!130;UBERON:0000925!3.52e-11!130;UBERON:0006595!3.52e-11!130;UBERON:0001007!1.61e-10!128;UBERON:0001555!1.61e-10!128;UBERON:0007026!1.61e-10!128;UBERON:0004921!2.79e-10!126;UBERON:0004185!2.79e-10!126;UBERON:0005256!3.52e-10!47;UBERON:0005172!7.10e-09!49;UBERON:0005173!7.10e-09!49;UBERON:0002417!7.10e-09!49;UBERON:0000916!7.10e-09!49;UBERON:0000077!7.92e-09!97;UBERON:0003104!1.18e-08!131;UBERON:0009142!1.18e-08!131;UBERON:0001041!4.19e-08!92;UBERON:0005153!4.27e-07!17;UBERON:0005157!4.83e-07!27;UBERON:0000949!7.03e-07!72 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.06e-17,79;UBERON:0002365,5.41e-16,25;UBERON:0002330,5.41e-16,25;UBERON:0002100,1.37e-15,90;UBERON:0002107,2.61e-14,22;UBERON:0007499,2.61e-14,22;UBERON:0006925,2.61e-14,22;UBERON:0009497,2.61e-14,22;UBERON:0000015,2.61e-14,22;UBERON:0002423,2.61e-14,22;UBERON:0006235,2.61e-14,22;UBERON:0008835,2.61e-14,22;UBERON:0003894,2.61e-14,22;UBERON:0004161,2.61e-14,22;UBERON:0008836,2.61e-14,22;UBERON:0009854,6.36e-14,23;UBERON:0009856,6.36e-14,23;UBERON:0009569,8.44e-13,66;UBERON:0005256,1.25e-10,45;UBERON:0003104,1.78e-09,61;UBERON:0009142,1.78e-09,61;UBERON:0005172,7.66e-09,49;UBERON:0005173,7.66e-09,49;UBERON:0002417,7.66e-09,49;UBERON:0000916,7.66e-09,49;UBERON:0004119,3.60e-07,118;UBERON:0000925,3.60e-07,118;UBERON:0006595,3.60e-07,118;UBERON:0005153,3.94e-07,17 | |||
|phase1_expression=2.88267924788629,3.48975407639361,5.91499011206397,9.98131897312539,5.50985302940982,5.03637815735669,7.00837921786577,1.03298658753261,0.985521055061667,1.40438715793196,0.513653904676515,0.319088635981346,1.19840510951844,1.57356724354195,0.333109761815663,0.202475267389826,0,0.473193248037357,1.09691546884591,1.69755860719212,6.54833334163237,1.19149141441062,1.30599894569468,4.7997726838022,5.04700418347774,2.8711598205751,3.01533397311352,3.44753972297422,5.51067916423484,1.51218077855958,3.99114919179548,2.54012269383853,4.30545351309199,0,4.33277429626912,1.99481574430191,4.49172583777212,0,0,0,0,0,0,3.52511090331616,2.23029248682932,4.40512205188036,4.69434806608824,0.65407546914134,5.27246838562732,3.4997381833371,3.21968769738334,0,0.335565212115473,1.45072428402269,1.00828139742739,7.97504251711436,4.87106847895886,3.6097046459421,0.809265843438391,1.05798195854407,0.633831403506179,5.08266798103698,3.55717918444456,0.899899717281399,0.988866362566974,0,2.99600110518405,0,0,0.405017814995072,0.210324961351382,1.42825492201902,2.42955395046775,0.367472397644862,0.191690942036473,0,4.40463523997555,1.65993539510744,1.53606533256243,0.923204014111357,0.640413505216868,0.52091337055676,1.67509799400829,0.56276261003168,2.44477196442896,2.06240009831567,1.28134512719193,2.60959224155421,0.832988126665025,0.906858721281426,6.95674772884027,73.9964534203992,63.2373340348208,131.14787556799,165.692986449156,94.5336731775378,31.3191056893807,2.55645483867087,2.85764605063156,1.7666978725517,5.63373679106722,1.28326477414318,2.54805239706646,0,3.68034769719064,1.77351905832569,3.53867111510348,38.5941513450423,1.55362730188303,5.93768556259299,4.8575891494518,8.22056791442781,10.8389283710347,7.53613202763113,3.41007250693544,4.64966387919799,54.1356979338279,1.87979163995885,0,5.50007289821191,3.97514733228708,5.81850303762267,3.72783522436244,2.63502717310392,2.09446706813455,6.89734049063197,0.599075622529601,1.19980546198682,0.762421362438388,1.04853447583376,0.915001205637253,1.13088916901578,0.869121600961382,1.53429274398198,1.45451631191692,1.62241263067758,3.05518091550949,3.98102305952298,6.06534620240819,13.4682787767343,1.56144531555244,1.60931473103431,2.70093194708024,1.35634336052144,2.04109497453984,1.66547836370305,1.96773621575431,4.13925393182425,2.80238390812695,4.34943984385984,7.9178005873777,7.45265490253754,9.45360647367033,6.268538997399,6.79081050146213,3.38358253591438,0.702213187313235,0.772043721344145,1.42081749697796,3.52113813310353,3.98694301967864,2.16074473753218,3.07768156260773,2.55793501271625,2.31400669331067,0.697601834251224,2.14618721119695,0.817357396570186,0.987359099480883,0.985004784474571,0.729619285912702,1.75439984910399,2.63460138349261,1.74468344388483,1.26173969138476,0.205809224758569,5.94753809370836,8.99131926656051,3.41261200856374,2.55460339046482,4.38149368495117,5.04208811558356,4.44756087689741,4.1849637744763,3.79623249235609,3.12928013975621,3.2673577144035,3.18330355265841,4.28920991662064,2.69645822596266,7.3486936957396,6.57166201739412,1.51734320762465,2.97046132785295,2.25415471346161,4.07302655690629,3.49114476901726,2.66516115583211,3.03535378196435,6.4948465111025,8.94892748695836,9.00799296629144,132.514324307956,8.5091003915208,12.3832166921318,19.1132795527126,27.7918366302249,44.8589517139495,55.5084356883495,58.1146197650637,12.8086829152278,74.9552658003462,83.3855597858656,66.9853705803306,71.7686648163489,116.186283855671,89.6987067609561,67.059649469508,30.6690295676564,4.35830247072115,2.77040459951444,3.73439188705414,4.92849521405854,11.8929442783689,29.9934987516377,25.5625078693716,14.817703545982,14.6166695168191,13.0752910299139,28.8399433899699,31.428666699593,41.5142798128938,0,0,42.2917274796371,21.5230662117691,1.12385412991454,1.75817529888305,5.40985319743029,0.504941854408746,4.10160685241134,1.95219372148319,3.01592756825919,1.91175038362042,2.89638276307112,1.69845918473299,2.42886421004937,1.75353514746787,1.18586333383957,1.92792789853084,2.41298144854057,5.52003371368491,2.44330439030364,1.64970122972535,17.2568679841952,5.09839335925461,6.34879469625977,12.2593301841334,18.3087173586079,16.908933136916,14.4719844174204,10.9060118843252,9.26893183800275,20.542389265828,16.8669773719998,11.3449097573006,16.000661470428,2.16073312837572,3.75140182969988,3.00071849044229,4.07882537377229,5.88617098086833,6.58196082408484,6.69822888052118,7.04015124191131,20.7595429446544,12.1290618930229,1.81374878235628,1.61464426695906,2.83470747162333,2.50681922406587,3.61109979439135,5.53813589596716,2.03967832211561,0.854354403989263,2.47664241555867,2.59272338317596,0.376736914009382,0.546776910884101,0.457556346413045,1.18984900995699,0.69975726161829,0.967399816630967,11.4560474161814,2.84702394223022,2.23651413839534,2.91614420218863,5.01811910434725,8.7345025498471,8.76618251501335,11.819444168723,7.0674104335688,3.49960427887841,16.776161453347,0,2.69129782879162,3.97100377097034,4.4723773319131,4.00395452780966,3.21016638432478,2.93393096614385,3.1249052362548,3.25063967719704,1.93267296660805,2.01621004380506,2.8441000856536,2.8381530140623,2.2596410576262,1.42912905275575,0.716106782669926,0.993406773906324,0.841368146639782,1.47689527174577,0.504832249740738,1.447929326445,1.51239277705261,1.16949456887703,1.44317762460494,1.8700304349051,4.53460767230423,0.665957860122194,1.34570784914214,1.67884616364078,1.9318959403219,6.75656911624255,4.39563898241436,3.64426244434412,10.5330141847426,0,0.920650473014354,0,0.68741272937475,1.37016503954128,0,0,0.45032120322422,0.453142408984205,0,1.03787347584177,3.99024873401031,4.43907374960749,5.83456120963906,6.49800804146745,4.96377472815038,8.00088220085815,8.03536723231687,10.2694147069381,8.08631077644152,9.12525479604863,9.24269072791773,8.14681114987977,8.38729496503788,6.26046611616185,9.0495801343784,8.11190281613988,6.36600427530227,6.59337441285291,7.21274708658547,11.3146853287187,8.5188386956482,10.0143199777875,6.54058874845478,7.52875043322645,7.44608549446753,6.58540702341981,9.73357932320019,8.01244271690584,7.85599180320834,7.23673610557462,7.38783617816726,6.54769669071503,6.50734732981057,8.29498427218908,4.74640098082097,12.1644436391612,5.37177635120746,1.72159498861959,6.39715115446595,4.17362104116759 | |phase1_expression=2.88267924788629,3.48975407639361,5.91499011206397,9.98131897312539,5.50985302940982,5.03637815735669,7.00837921786577,1.03298658753261,0.985521055061667,1.40438715793196,0.513653904676515,0.319088635981346,1.19840510951844,1.57356724354195,0.333109761815663,0.202475267389826,0,0.473193248037357,1.09691546884591,1.69755860719212,6.54833334163237,1.19149141441062,1.30599894569468,4.7997726838022,5.04700418347774,2.8711598205751,3.01533397311352,3.44753972297422,5.51067916423484,1.51218077855958,3.99114919179548,2.54012269383853,4.30545351309199,0,4.33277429626912,1.99481574430191,4.49172583777212,0,0,0,0,0,0,3.52511090331616,2.23029248682932,4.40512205188036,4.69434806608824,0.65407546914134,5.27246838562732,3.4997381833371,3.21968769738334,0,0.335565212115473,1.45072428402269,1.00828139742739,7.97504251711436,4.87106847895886,3.6097046459421,0.809265843438391,1.05798195854407,0.633831403506179,5.08266798103698,3.55717918444456,0.899899717281399,0.988866362566974,0,2.99600110518405,0,0,0.405017814995072,0.210324961351382,1.42825492201902,2.42955395046775,0.367472397644862,0.191690942036473,0,4.40463523997555,1.65993539510744,1.53606533256243,0.923204014111357,0.640413505216868,0.52091337055676,1.67509799400829,0.56276261003168,2.44477196442896,2.06240009831567,1.28134512719193,2.60959224155421,0.832988126665025,0.906858721281426,6.95674772884027,73.9964534203992,63.2373340348208,131.14787556799,165.692986449156,94.5336731775378,31.3191056893807,2.55645483867087,2.85764605063156,1.7666978725517,5.63373679106722,1.28326477414318,2.54805239706646,0,3.68034769719064,1.77351905832569,3.53867111510348,38.5941513450423,1.55362730188303,5.93768556259299,4.8575891494518,8.22056791442781,10.8389283710347,7.53613202763113,3.41007250693544,4.64966387919799,54.1356979338279,1.87979163995885,0,5.50007289821191,3.97514733228708,5.81850303762267,3.72783522436244,2.63502717310392,2.09446706813455,6.89734049063197,0.599075622529601,1.19980546198682,0.762421362438388,1.04853447583376,0.915001205637253,1.13088916901578,0.869121600961382,1.53429274398198,1.45451631191692,1.62241263067758,3.05518091550949,3.98102305952298,6.06534620240819,13.4682787767343,1.56144531555244,1.60931473103431,2.70093194708024,1.35634336052144,2.04109497453984,1.66547836370305,1.96773621575431,4.13925393182425,2.80238390812695,4.34943984385984,7.9178005873777,7.45265490253754,9.45360647367033,6.268538997399,6.79081050146213,3.38358253591438,0.702213187313235,0.772043721344145,1.42081749697796,3.52113813310353,3.98694301967864,2.16074473753218,3.07768156260773,2.55793501271625,2.31400669331067,0.697601834251224,2.14618721119695,0.817357396570186,0.987359099480883,0.985004784474571,0.729619285912702,1.75439984910399,2.63460138349261,1.74468344388483,1.26173969138476,0.205809224758569,5.94753809370836,8.99131926656051,3.41261200856374,2.55460339046482,4.38149368495117,5.04208811558356,4.44756087689741,4.1849637744763,3.79623249235609,3.12928013975621,3.2673577144035,3.18330355265841,4.28920991662064,2.69645822596266,7.3486936957396,6.57166201739412,1.51734320762465,2.97046132785295,2.25415471346161,4.07302655690629,3.49114476901726,2.66516115583211,3.03535378196435,6.4948465111025,8.94892748695836,9.00799296629144,132.514324307956,8.5091003915208,12.3832166921318,19.1132795527126,27.7918366302249,44.8589517139495,55.5084356883495,58.1146197650637,12.8086829152278,74.9552658003462,83.3855597858656,66.9853705803306,71.7686648163489,116.186283855671,89.6987067609561,67.059649469508,30.6690295676564,4.35830247072115,2.77040459951444,3.73439188705414,4.92849521405854,11.8929442783689,29.9934987516377,25.5625078693716,14.817703545982,14.6166695168191,13.0752910299139,28.8399433899699,31.428666699593,41.5142798128938,0,0,42.2917274796371,21.5230662117691,1.12385412991454,1.75817529888305,5.40985319743029,0.504941854408746,4.10160685241134,1.95219372148319,3.01592756825919,1.91175038362042,2.89638276307112,1.69845918473299,2.42886421004937,1.75353514746787,1.18586333383957,1.92792789853084,2.41298144854057,5.52003371368491,2.44330439030364,1.64970122972535,17.2568679841952,5.09839335925461,6.34879469625977,12.2593301841334,18.3087173586079,16.908933136916,14.4719844174204,10.9060118843252,9.26893183800275,20.542389265828,16.8669773719998,11.3449097573006,16.000661470428,2.16073312837572,3.75140182969988,3.00071849044229,4.07882537377229,5.88617098086833,6.58196082408484,6.69822888052118,7.04015124191131,20.7595429446544,12.1290618930229,1.81374878235628,1.61464426695906,2.83470747162333,2.50681922406587,3.61109979439135,5.53813589596716,2.03967832211561,0.854354403989263,2.47664241555867,2.59272338317596,0.376736914009382,0.546776910884101,0.457556346413045,1.18984900995699,0.69975726161829,0.967399816630967,11.4560474161814,2.84702394223022,2.23651413839534,2.91614420218863,5.01811910434725,8.7345025498471,8.76618251501335,11.819444168723,7.0674104335688,3.49960427887841,16.776161453347,0,2.69129782879162,3.97100377097034,4.4723773319131,4.00395452780966,3.21016638432478,2.93393096614385,3.1249052362548,3.25063967719704,1.93267296660805,2.01621004380506,2.8441000856536,2.8381530140623,2.2596410576262,1.42912905275575,0.716106782669926,0.993406773906324,0.841368146639782,1.47689527174577,0.504832249740738,1.447929326445,1.51239277705261,1.16949456887703,1.44317762460494,1.8700304349051,4.53460767230423,0.665957860122194,1.34570784914214,1.67884616364078,1.9318959403219,6.75656911624255,4.39563898241436,3.64426244434412,10.5330141847426,0,0.920650473014354,0,0.68741272937475,1.37016503954128,0,0,0.45032120322422,0.453142408984205,0,1.03787347584177,3.99024873401031,4.43907374960749,5.83456120963906,6.49800804146745,4.96377472815038,8.00088220085815,8.03536723231687,10.2694147069381,8.08631077644152,9.12525479604863,9.24269072791773,8.14681114987977,8.38729496503788,6.26046611616185,9.0495801343784,8.11190281613988,6.36600427530227,6.59337441285291,7.21274708658547,11.3146853287187,8.5188386956482,10.0143199777875,6.54058874845478,7.52875043322645,7.44608549446753,6.58540702341981,9.73357932320019,8.01244271690584,7.85599180320834,7.23673610557462,7.38783617816726,6.54769669071503,6.50734732981057,8.29498427218908,4.74640098082097,12.1644436391612,5.37177635120746,1.72159498861959,6.39715115446595,4.17362104116759 | ||
|short_description=p2@Ggcx | |short_description=p2@Ggcx | ||
}} | }} |
Latest revision as of 17:34, 1 October 2015
Short description: | p2@Ggcx |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ggcx_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 20bp_to_NM_019802, uc009cio.1_5end |
EntrezGene: | Ggcx |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 2.06e-17 | 79 |
exocrine gland | 5.41e-16 | 25 |
exocrine system | 5.41e-16 | 25 |
trunk | 1.37e-15 | 90 |
liver | 2.61e-14 | 22 |
epithelial sac | 2.61e-14 | 22 |
digestive gland | 2.61e-14 | 22 |
epithelium of foregut-midgut junction | 2.61e-14 | 22 |
anatomical boundary | 2.61e-14 | 22 |
hepatobiliary system | 2.61e-14 | 22 |
foregut-midgut junction | 2.61e-14 | 22 |
hepatic diverticulum | 2.61e-14 | 22 |
liver primordium | 2.61e-14 | 22 |
septum transversum | 2.61e-14 | 22 |
liver bud | 2.61e-14 | 22 |
digestive tract diverticulum | 6.36e-14 | 23 |
sac | 6.36e-14 | 23 |
subdivision of trunk | 8.44e-13 | 66 |
trunk mesenchyme | 1.25e-10 | 45 |
mesenchyme | 1.78e-09 | 61 |
entire embryonic mesenchyme | 1.78e-09 | 61 |
abdomen element | 7.66e-09 | 49 |
abdominal segment element | 7.66e-09 | 49 |
abdominal segment of trunk | 7.66e-09 | 49 |
abdomen | 7.66e-09 | 49 |
endoderm-derived structure | 3.60e-07 | 118 |
endoderm | 3.60e-07 | 118 |
presumptive endoderm | 3.60e-07 | 118 |
epithelial bud | 3.94e-07 | 17 |