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FFCP PHASE1:Mm9::chr3:19857088..19857114,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:19857088..19857114,+
|DHSsupport=NA
|short_description=p3@Cp
|DPIdataset=NA
|description=CAGE_peak_3_at_Cp_5end
|association_with_transcript=0bp_to_ENSMUST00000108328_5end
|EntrezGene=12870
|EntrezGene=12870
|HGNC=
|HGNC=
|MCL_coexpression_id=1790
|TSSclassifier=NA
|UniProt=G3X8Q5
|UniProt=G3X8Q5
|association_with_transcript=0bp_to_ENSMUST00000108328_5end
|cluster_id=chr3:19857088..19857114,+
|description=CAGE_peak_3_at_Cp_5end
|id=chr3:19857088..19857114,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005256!5.18e-13!47;UBERON:0002100!3.12e-11!98;UBERON:0002365!8.15e-11!25;UBERON:0002330!8.15e-11!25;UBERON:0004111!1.64e-10!122;UBERON:0003914!3.47e-10!47;UBERON:0009569!3.98e-10!66;UBERON:0005177!5.75e-10!85;UBERON:0002107!4.00e-09!22;UBERON:0007499!4.00e-09!22;UBERON:0006925!4.00e-09!22;UBERON:0009497!4.00e-09!22;UBERON:0000015!4.00e-09!22;UBERON:0002423!4.00e-09!22;UBERON:0006235!4.00e-09!22;UBERON:0008835!4.00e-09!22;UBERON:0003894!4.00e-09!22;UBERON:0004161!4.00e-09!22;UBERON:0008836!4.00e-09!22;UBERON:0000025!4.81e-09!114;UBERON:0005172!1.65e-08!49;UBERON:0005173!1.65e-08!49;UBERON:0002417!1.65e-08!49;UBERON:0000916!1.65e-08!49;UBERON:0000466!2.25e-08!79;UBERON:0009854!3.41e-08!23;UBERON:0009856!3.41e-08!23;UBERON:0005085!1.21e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.10e-13,45;UBERON:0003914,6.10e-12,47;UBERON:0002365,1.63e-11,25;UBERON:0002330,1.63e-11,25;UBERON:0002100,5.64e-11,90;UBERON:0003104,2.49e-10,61;UBERON:0009142,2.49e-10,61;UBERON:0005177,6.90e-10,79;UBERON:0009569,7.55e-10,66;UBERON:0002107,1.35e-09,22;UBERON:0007499,1.35e-09,22;UBERON:0006925,1.35e-09,22;UBERON:0009497,1.35e-09,22;UBERON:0000015,1.35e-09,22;UBERON:0002423,1.35e-09,22;UBERON:0006235,1.35e-09,22;UBERON:0008835,1.35e-09,22;UBERON:0003894,1.35e-09,22;UBERON:0004161,1.35e-09,22;UBERON:0008836,1.35e-09,22;UBERON:0009854,8.38e-09,23;UBERON:0009856,8.38e-09,23;UBERON:0004111,1.24e-08,122;UBERON:0005085,3.76e-08,13;UBERON:0000025,1.40e-07,114;UBERON:0005172,2.23e-07,49;UBERON:0005173,2.23e-07,49;UBERON:0002417,2.23e-07,49;UBERON:0000916,2.23e-07,49;UBERON:0001444,5.49e-07,11;UBERON:0000970,6.04e-07,9;UBERON:0000019,6.04e-07,9;UBERON:0000047,6.04e-07,9;UBERON:0010312,6.04e-07,9;UBERON:0004088,6.04e-07,9;UBERON:0002104,6.04e-07,9;UBERON:0001456,6.04e-07,9;UBERON:0003072,6.04e-07,9;UBERON:0004128,6.04e-07,9;UBERON:0003071,6.04e-07,9;UBERON:0000033,9.43e-07,13
|phase1_expression=23.0614339830903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,3.91199134694921,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,2.12891555560981,1.83546752161682,7.04152209913235,0.872100625521786,0.439372365468944,0.972149495371417,1.39986421625363,1.43752564364972,0,0,0,35.7590616089966,34.6705462325896,22.6895720602075,0.202316460859598,0,0,1.69422266034566,0.889294796111139,0,0,0,1.19840044207362,1.92109152660777,0,0.135005938331691,0,0.285650984403804,1.32521124570968,0,0,0,0,1.14918604276669,0.614426133024974,0.527545150920775,0.365950574409639,1.56274011167028,0.558365998002762,0.56276261003168,3.36156145108982,0.589257170947335,2.27794689278565,0.931997229126503,0.075726193333184,0,16.5222758559956,7.74381489283248,1.3599426674155,4.31762553310254,13.6453047664011,8.06448396775204,4.0728881838208,0,0,0,0.422530259330042,0,0,0,2.16491041011214,1.52015919285059,1.01104889002957,5.25245846707676,4.40194402200192,12.3206975423805,0.346970653532272,1.52232739156071,2.7673859670727,7.83757730873637,15.9920641704559,11.4356598110005,0.247194967734374,3.61498392299779,1.76922110389975,0,1.10420759230197,0,0,0.878342391034642,1.8850203613211,0,0,0,0,2.39665023047716,0.457500602818626,0.628271760564322,1.91206752211504,1.53429274398198,3.32460871295296,1.46017136760982,5.70300437561771,6.34475550111474,18.4487613656583,9.46988351489133,5.72529949035896,5.0578462975364,10.9837899181263,8.74087943447147,17.6214532801939,15.8861013153214,18.0844328400277,17.074422468775,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0.232533944750408,1.87791380979733,2.33530684734339,1.31647879930784,2.62667942526552,6.32336714457675,9.9415991449226,9.87975518809728,21.4730270016595,1.89260953707715,1.85228302282712,0,0.264450566663544,0,0,0,0,0,0,0,0.329397909448022,1.50801125280162,0.596869416123452,0.974820435595601,0,1.08069024937347,0.398282546508734,0,0.342745537829186,0,0.203651327845314,0.775809948670503,0.561086559122548,1.07502113111237,3.39503340353085,2.04098346193787,5.79966670432462,7.11486305009157,0,0.393117990226406,0.899448449539415,2.43432145666204,11.0941493486112,24.4440817710163,22.1526025837124,21.5639851610797,12.9043864198398,30.1913233707445,33.8648262378338,31.8278426576852,16.1650481886152,12.7372163600558,13.0259750768109,7.20537441649758,0,0,0,0,1.84256883185997,5.71304738126433,3.90267295715598,4.88668946729192,6.42247599981447,7.01600982092943,9.34020893879707,7.9435091658312,13.5970115066621,0,0,23.6046851049137,38.3552077363578,2.0871576698413,4.57125577709592,0,3.02965112645248,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0.566153061577665,0.809621403349789,0,0.790575555893047,1.92792789853084,1.56134093729095,0.178065603667255,2.11753047159649,1.97964147567043,2.65490276679926,0,0,0,0,0.922305443831782,1.55056975900933,3.63533729477506,3.56497378384721,3.16036757935816,2.10837217149998,7.21948802737308,1.36175842301515,1.44048875225048,0.258717367565509,1.28602221018955,0.354680467284547,1.42695054081656,0.329098041204242,1.2178597964584,0.469343416127421,2.1183207086382,4.19003956304428,1.48397627647332,2.09903754704677,0.603129249281559,1.3130957840345,0.820704498725306,0.582961673259701,2.96680483216816,0.683483523191411,0.206386867963223,0,0.565105371014073,0.136694227721025,0.457556346413045,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.655087691238533,0.539457385539283,3.88471241909079,0.785267825952089,1.03691978633434,4.34937519160848,0,0.299033092087958,0.165458490457098,0.388902376688095,0.258319646955462,0.337912250981556,1.64300134104056,3.3853140059427,5.24296722128554,3.62376181239009,8.64090018773596,0,0,0,0.129920822977795,0,0.39736270956253,0.240390899039938,0.147689527174577,0,0,0,0.292373642219257,0,0.233753804363138,1.13365191807606,0,0,0,2.31827512838629,0.93841237725591,1.09890974560359,0.857473516316263,4.01257683228291,0.564751842617067,0.460325236507177,1.14579102687879,1.3748254587495,2.05524755931193,0.755393897389701,0,0.45032120322422,1.35942722695261,0,0.103787347584177,0,1.36586884603307,0.486213434136588,0.628839487883947,1.47074806760011,3.55594764482584,2.67845574410562,1.28367683836726,3.03236654116557,4.30914809813408,3.9611531691076,3.37109426891577,3.84150914429216,5.22662767496081,2.85776214769844,4.75125736373908,2.89363830695558,2.88460130562315,3.23837624295674,3.77156177623957,5.14679837862079,5.96090474868302,4.0696996657052,4.14081273827455,3.80765735512544,3.47563148458268,3.15683653725411,5.16055632614275,3.92799590160417,2.84724043498018,3.54616136552028,3.27384834535751,3.40861050609125,3.08650577569826,0,1.87145286756327,2.14871054048298,1.72159498861959,1.10295709559758,0.695603506861264
|phase1_expression=23.0614339830903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,3.91199134694921,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,2.12891555560981,1.83546752161682,7.04152209913235,0.872100625521786,0.439372365468944,0.972149495371417,1.39986421625363,1.43752564364972,0,0,0,35.7590616089966,34.6705462325896,22.6895720602075,0.202316460859598,0,0,1.69422266034566,0.889294796111139,0,0,0,1.19840044207362,1.92109152660777,0,0.135005938331691,0,0.285650984403804,1.32521124570968,0,0,0,0,1.14918604276669,0.614426133024974,0.527545150920775,0.365950574409639,1.56274011167028,0.558365998002762,0.56276261003168,3.36156145108982,0.589257170947335,2.27794689278565,0.931997229126503,0.075726193333184,0,16.5222758559956,7.74381489283248,1.3599426674155,4.31762553310254,13.6453047664011,8.06448396775204,4.0728881838208,0,0,0,0.422530259330042,0,0,0,2.16491041011214,1.52015919285059,1.01104889002957,5.25245846707676,4.40194402200192,12.3206975423805,0.346970653532272,1.52232739156071,2.7673859670727,7.83757730873637,15.9920641704559,11.4356598110005,0.247194967734374,3.61498392299779,1.76922110389975,0,1.10420759230197,0,0,0.878342391034642,1.8850203613211,0,0,0,0,2.39665023047716,0.457500602818626,0.628271760564322,1.91206752211504,1.53429274398198,3.32460871295296,1.46017136760982,5.70300437561771,6.34475550111474,18.4487613656583,9.46988351489133,5.72529949035896,5.0578462975364,10.9837899181263,8.74087943447147,17.6214532801939,15.8861013153214,18.0844328400277,17.074422468775,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0.232533944750408,1.87791380979733,2.33530684734339,1.31647879930784,2.62667942526552,6.32336714457675,9.9415991449226,9.87975518809728,21.4730270016595,1.89260953707715,1.85228302282712,0,0.264450566663544,0,0,0,0,0,0,0,0.329397909448022,1.50801125280162,0.596869416123452,0.974820435595601,0,1.08069024937347,0.398282546508734,0,0.342745537829186,0,0.203651327845314,0.775809948670503,0.561086559122548,1.07502113111237,3.39503340353085,2.04098346193787,5.79966670432462,7.11486305009157,0,0.393117990226406,0.899448449539415,2.43432145666204,11.0941493486112,24.4440817710163,22.1526025837124,21.5639851610797,12.9043864198398,30.1913233707445,33.8648262378338,31.8278426576852,16.1650481886152,12.7372163600558,13.0259750768109,7.20537441649758,0,0,0,0,1.84256883185997,5.71304738126433,3.90267295715598,4.88668946729192,6.42247599981447,7.01600982092943,9.34020893879707,7.9435091658312,13.5970115066621,0,0,23.6046851049137,38.3552077363578,2.0871576698413,4.57125577709592,0,3.02965112645248,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0.566153061577665,0.809621403349789,0,0.790575555893047,1.92792789853084,1.56134093729095,0.178065603667255,2.11753047159649,1.97964147567043,2.65490276679926,0,0,0,0,0.922305443831782,1.55056975900933,3.63533729477506,3.56497378384721,3.16036757935816,2.10837217149998,7.21948802737308,1.36175842301515,1.44048875225048,0.258717367565509,1.28602221018955,0.354680467284547,1.42695054081656,0.329098041204242,1.2178597964584,0.469343416127421,2.1183207086382,4.19003956304428,1.48397627647332,2.09903754704677,0.603129249281559,1.3130957840345,0.820704498725306,0.582961673259701,2.96680483216816,0.683483523191411,0.206386867963223,0,0.565105371014073,0.136694227721025,0.457556346413045,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0.655087691238533,0.539457385539283,3.88471241909079,0.785267825952089,1.03691978633434,4.34937519160848,0,0.299033092087958,0.165458490457098,0.388902376688095,0.258319646955462,0.337912250981556,1.64300134104056,3.3853140059427,5.24296722128554,3.62376181239009,8.64090018773596,0,0,0,0.129920822977795,0,0.39736270956253,0.240390899039938,0.147689527174577,0,0,0,0.292373642219257,0,0.233753804363138,1.13365191807606,0,0,0,2.31827512838629,0.93841237725591,1.09890974560359,0.857473516316263,4.01257683228291,0.564751842617067,0.460325236507177,1.14579102687879,1.3748254587495,2.05524755931193,0.755393897389701,0,0.45032120322422,1.35942722695261,0,0.103787347584177,0,1.36586884603307,0.486213434136588,0.628839487883947,1.47074806760011,3.55594764482584,2.67845574410562,1.28367683836726,3.03236654116557,4.30914809813408,3.9611531691076,3.37109426891577,3.84150914429216,5.22662767496081,2.85776214769844,4.75125736373908,2.89363830695558,2.88460130562315,3.23837624295674,3.77156177623957,5.14679837862079,5.96090474868302,4.0696996657052,4.14081273827455,3.80765735512544,3.47563148458268,3.15683653725411,5.16055632614275,3.92799590160417,2.84724043498018,3.54616136552028,3.27384834535751,3.40861050609125,3.08650577569826,0,1.87145286756327,2.14871054048298,1.72159498861959,1.10295709559758,0.695603506861264
|short_description=p3@Cp
}}
}}

Latest revision as of 21:06, 1 October 2015

Short description:p3@Cp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cp_5end
Coexpression cluster:MCL_coexpression_mm9:1790
Association with transcript: 0bp_to_ENSMUST00000108328_5end
EntrezGene:Cp
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Cp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G723.06
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.52
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C135.76
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E134.67
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C522.69
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.52
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.25
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D712.32
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F57.84
adrenal gland, neonate N00.CNhs11191.1311-23C115.99
adrenal gland, neonate N25.CNhs11223.1377-27I311.44
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.70
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.34
epididymis, adult.CNhs10490.58-23B218.45
eyeball, adult.CNhs10484.31-12G49.47
eyeball, embryo E12.CNhs11016.345-16C65.73
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C910.98
eyeball, embryo E17.CNhs11023.1261-18D48.74
eyeball, neonate N00.CNhs11207.633-15C617.62
eyeball, neonate N01.CNhs11140.1532-43E715.89
eyeball, neonate N02.CNhs11205.1551-44G818.08
eyeball, neonate N16.CNhs11188.777-19A217.07
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E32.34
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G12.63
heart, neonate N16.CNhs11209.782-15G16.32
heart, neonate N20.CNhs11127.821-26I69.94
heart, neonate N25.CNhs11196.1351-25D39.88
heart, neonate N30.CNhs11202.1390-42D221.47
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I13.40
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H15.80
liver, adult pregnant day01.CNhs10466.508-5B27.11
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F511.09
liver, embryo E17.CNhs10510.481-18A324.44
liver, embryo E18.CNhs10579.499-43G422.15
liver, neonate N00.CNhs11117.641-24F421.56
liver, neonate N03.CNhs11123.1345-25G212.90
liver, neonate N06.CNhs11101.684-20A830.19
liver, neonate N07.CNhs11103.716-20H233.86
liver, neonate N10.CNhs11115.751-24B931.83
liver, neonate N20.CNhs11220.823-25A316.17
liver, neonate N25.CNhs11198.1368-26H112.74
liver, neonate N30.CNhs11106.1382-42D113.03
lung, adult.CNhs10474.28-22B17.21
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I65.71
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E54.89
lung, neonate N07.CNhs11111.715-19A36.42
lung, neonate N10.CNhs11219.750-23E67.02
lung, neonate N20.CNhs11109.822-18A49.34
lung, neonate N25.CNhs11119.1359-25C77.94
lung, neonate N30.CNhs11133.1394-42H213.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B623.60
mammary gland, adult pregnant day19.CNhs10476.588-5H238.36
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A34.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A93.88
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I43.39
testis, neonate N10.CNhs11204.763-44D95.24
testis, neonate N20.CNhs11110.839-18H33.62
testis, neonate N30.CNhs11130.1391-42E28.64
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk mesenchyme1.10e-1345
epithelial tube6.10e-1247
exocrine gland1.63e-1125
exocrine system1.63e-1125
trunk5.64e-1190
mesenchyme2.49e-1061
entire embryonic mesenchyme2.49e-1061
trunk region element6.90e-1079
subdivision of trunk7.55e-1066
liver1.35e-0922
epithelial sac1.35e-0922
digestive gland1.35e-0922
epithelium of foregut-midgut junction1.35e-0922
anatomical boundary1.35e-0922
hepatobiliary system1.35e-0922
foregut-midgut junction1.35e-0922
hepatic diverticulum1.35e-0922
liver primordium1.35e-0922
septum transversum1.35e-0922
liver bud1.35e-0922
digestive tract diverticulum8.38e-0923
sac8.38e-0923
anatomical conduit1.24e-08122
ectodermal placode3.76e-0813
tube1.40e-07114
abdomen element2.23e-0749
abdominal segment element2.23e-0749
abdominal segment of trunk2.23e-0749
abdomen2.23e-0749
subdivision of head5.49e-0711
eye6.04e-079
camera-type eye6.04e-079
simple eye6.04e-079
immature eye6.04e-079
ocular region6.04e-079
visual system6.04e-079
face6.04e-079
optic cup6.04e-079
optic vesicle6.04e-079
eye primordium6.04e-079
head9.43e-0713
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