FFCP PHASE1:Mm9::chr5:124900414..124900433,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67956 | |EntrezGene=67956 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENSMUST00000135667_5end | |association_with_transcript=3bp_to_ENSMUST00000135667_5end | ||
|cluster_id=chr5:124900414..124900433,+ | |||
|description=CAGE_peak_12_at_Setd8_5end | |description=CAGE_peak_12_at_Setd8_5end | ||
|id=chr5:124900414..124900433,+ | |id=chr5:124900414..124900433,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,3.32e-10,2;CL:0000328,3.32e-10,2;CL:0002573,3.32e-10,2;CL:0002376,3.32e-10,2;CL:0000218,3.32e-10,2;CL:0000692,3.32e-10,2;CL:0002377,3.32e-10,2;CL:0002375,3.32e-10,2;CL:0000215,4.56e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,1.44e-08,43;UBERON:0007100,1.48e-08,18;UBERON:0000948,1.48e-08,18;UBERON:0005498,1.48e-08,18;UBERON:0004140,1.48e-08,18;UBERON:0009881,1.48e-08,18;UBERON:0004141,1.48e-08,18;UBERON:0003084,1.48e-08,18;UBERON:0007005,1.48e-08,18;UBERON:0004139,1.48e-08,18;UBERON:0004291,1.48e-08,18 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0.878744730937887,0,0.699932108126813,0,0,0,0,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,0.103689612308478,0.135005938331691,0,0.285650984403804,0.662605622854841,0,0,0,1.10115880999389,0.127687338085188,0.921639199537461,0,0,0,1.11673199600552,0,0.15279824777681,0.883885756421003,1.28134512719193,0,8.5570598466498,13.5273092591146,0,0,0,0,0,0,0.421333260395256,0,0,0,1.97180787687353,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0.150722640552623,0,0,1.48316980640624,0.144599356919912,0,0.161766849947409,0,0,0,0,0.83778682725382,0,0,0,0,0.449371918214468,0.457500602818626,0,0,0,0,1.1356888414743,0,0.124406970610093,1.26361379216837,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0.308534225774757,0.232533944750408,0,0.934122738937356,1.81015834904829,6.7308660272429,7.94474333549386,12.8655988934292,7.02560368931362,15.7021509949635,0.420579897128254,0.514523061896422,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.295220295959204,1.255989822731,1.1105744752962,0,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0.763877555344259,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0.481651769963376,1.05490517932983,0,0,0,0,0,0,0.668396022247182,0.849229592366497,0,0,0,0,0.283880170416537,0,0,0.824850614862677,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0.304464949114599,0.938686832254841,0.42366414172764,1.54369878638473,0.16488625294148,0.161464426695906,0.120625849856312,0.716234064018819,0.492422699235184,0.291480836629851,0.741701208042039,0,0,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0,0.108005340821801,0.418176592028937,0,0,0.0826534557253359,0,0,1.86401793926078,0.56369293868419,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503653849092235,0,0,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0.188626341386076,0.280924522409647,0.320125762024346,0.34461281373368,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0.441182838239031,0.463735671240843 | |phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0.878744730937887,0,0.699932108126813,0,0,0,0,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,0.103689612308478,0.135005938331691,0,0.285650984403804,0.662605622854841,0,0,0,1.10115880999389,0.127687338085188,0.921639199537461,0,0,0,1.11673199600552,0,0.15279824777681,0.883885756421003,1.28134512719193,0,8.5570598466498,13.5273092591146,0,0,0,0,0,0,0.421333260395256,0,0,0,1.97180787687353,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0.150722640552623,0,0,1.48316980640624,0.144599356919912,0,0.161766849947409,0,0,0,0,0.83778682725382,0,0,0,0,0.449371918214468,0.457500602818626,0,0,0,0,1.1356888414743,0,0.124406970610093,1.26361379216837,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0.308534225774757,0.232533944750408,0,0.934122738937356,1.81015834904829,6.7308660272429,7.94474333549386,12.8655988934292,7.02560368931362,15.7021509949635,0.420579897128254,0.514523061896422,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.295220295959204,1.255989822731,1.1105744752962,0,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0.763877555344259,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0.481651769963376,1.05490517932983,0,0,0,0,0,0,0.668396022247182,0.849229592366497,0,0,0,0,0.283880170416537,0,0,0.824850614862677,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0.304464949114599,0.938686832254841,0.42366414172764,1.54369878638473,0.16488625294148,0.161464426695906,0.120625849856312,0.716234064018819,0.492422699235184,0.291480836629851,0.741701208042039,0,0,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0,0.108005340821801,0.418176592028937,0,0,0.0826534557253359,0,0,1.86401793926078,0.56369293868419,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503653849092235,0,0,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0.188626341386076,0.280924522409647,0.320125762024346,0.34461281373368,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0.441182838239031,0.463735671240843 | ||
|short_description=p12@Setd8 | |short_description=p12@Setd8 | ||
}} | }} |
Latest revision as of 21:45, 1 October 2015
Short description: | p12@Setd8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Setd8_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 3bp_to_ENSMUST00000135667_5end |
EntrezGene: | Setd8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 3.32e-10 | 2 |
myelin accumulating cell | 3.32e-10 | 2 |
Schwann cell | 3.32e-10 | 2 |
non-myelinating Schwann cell | 3.32e-10 | 2 |
myelinating Schwann cell;;Schwann cell | 3.32e-10 | 2 |
terminal Schwann cell | 3.32e-10 | 2 |
immature Schwann cell | 3.32e-10 | 2 |
Schwann cell precursor | 3.32e-10 | 2 |
barrier cell | 4.56e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
compound organ | 1.44e-08 | 43 |
primary circulatory organ | 1.48e-08 | 18 |
heart | 1.48e-08 | 18 |
primitive heart tube | 1.48e-08 | 18 |
primary heart field | 1.48e-08 | 18 |
anterior lateral plate mesoderm | 1.48e-08 | 18 |
heart tube | 1.48e-08 | 18 |
heart primordium | 1.48e-08 | 18 |
cardiac mesoderm | 1.48e-08 | 18 |
cardiogenic plate | 1.48e-08 | 18 |
heart rudiment | 1.48e-08 | 18 |