FFCP PHASE1:Mm9::chrX:53802692..53802721,-: Difference between revisions
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|id=chrX:53802692..53802721,-
|short_description=p1@Gm648
|description=CAGE_peak_1_at_Gm648_5end
|association_with_transcript=61bp_to_ENSMUST00000081133,NM_00103337...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=270599 | |EntrezGene=270599 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=31 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UJ22 | |UniProt=Q3UJ22 | ||
|association_with_transcript=61bp_to_ENSMUST00000081133,NM_001033372,uc009tgi.1_5end | |||
|cluster_id=chrX:53802692..53802721,- | |||
|description=CAGE_peak_1_at_Gm648_5end | |||
|id=chrX:53802692..53802721,- | |||
|ontology_enrichment_celltype=CL:0000349!1.20e-08!3;CL:0000351!1.20e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.88e-08,3;CL:0000351,1.88e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.22e-18!3;UBERON:0000478!2.22e-18!3;UBERON:0000158!2.22e-18!3;UBERON:0001987!7.08e-13!2;UBERON:0003124!7.08e-13!2;UBERON:0004340!7.08e-13!2;UBERON:0000358!1.20e-08!3;UBERON:0000307!1.20e-08!3;UBERON:0000305!3.59e-07!1;UBERON:0005795!7.43e-07!4;UBERON:0000995!7.43e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.33e-65,3;UBERON:0000478,1.33e-65,3;UBERON:0000158,1.33e-65,3;UBERON:0001987,1.66e-44,2;UBERON:0003124,1.66e-44,2;UBERON:0004340,1.66e-44,2;UBERON:0005795,6.55e-23,4;UBERON:0000995,6.55e-23,4;UBERON:0000305,8.39e-23,1;UBERON:0003975,1.42e-18,5;UBERON:0003134,4.89e-12,8;UBERON:0004175,8.07e-11,9;UBERON:0000474,8.07e-11,9;UBERON:0004923,4.35e-09,24;UBERON:0003100,4.82e-09,11;UBERON:0004871,1.59e-08,3;UBERON:0000358,1.88e-08,3;UBERON:0000307,1.88e-08,3;UBERON:0007010,1.88e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.2812074832812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7124234773517,49.7805366529977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77588762699252,0,0.839423081820392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.2812074832812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7124234773517,49.7805366529977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77588762699252,0,0.839423081820392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p1@Gm648 | |||
}} | }} |
Latest revision as of 21:53, 1 October 2015
Short description: | p1@Gm648 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm648_5end |
Coexpression cluster: | MCL_coexpression_mm9:31 |
Association with transcript: | 61bp_to_ENSMUST00000081133, NM_001033372, uc009tgi.1_5end |
EntrezGene: | Gm648 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.88e-08 | 3 |
trophoblast cell | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.33e-65 | 3 |
extraembryonic structure | 1.33e-65 | 3 |
membranous layer | 1.33e-65 | 3 |
placenta | 1.66e-44 | 2 |
chorion | 1.66e-44 | 2 |
allantois | 1.66e-44 | 2 |
embryonic uterus | 6.55e-23 | 4 |
uterus | 6.55e-23 | 4 |
amnion | 8.39e-23 | 1 |
internal female genitalia | 1.42e-18 | 5 |
female reproductive organ | 4.89e-12 | 8 |
internal genitalia | 8.07e-11 | 9 |
female reproductive system | 8.07e-11 | 9 |
organ component layer | 4.35e-09 | 24 |
female organism | 4.82e-09 | 11 |
somatic layer of lateral plate mesoderm | 1.59e-08 | 3 |
blastocyst | 1.88e-08 | 3 |
blastula | 1.88e-08 | 3 |
cleaving embryo | 1.88e-08 | 3 |