FFCP PHASE1:Mm9::chr16:34096069..34096146,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr16:34096069..34096146,- to FFCP PHASE1:Mm9::chr16:34096069..34096146,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=545156 | |EntrezGene=545156 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=A2CG49,E9QN03,D3Z534,D3Z4R2 | |UniProt=A2CG49,E9QN03,D3Z534,D3Z4R2 | ||
|association_with_transcript=0bp_to_ENSMUST00000023522,ENSMUST00000099959,ENSMUST00000114964,ENSMUST00000114973_5end | |||
|cluster_id=chr16:34096069..34096146,- | |||
|description=CAGE_peak_1_at_Kalrn_5end | |||
|id=chr16:34096069..34096146,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.92e-14!59;UBERON:0000160!1.64e-12!43;UBERON:0004119!2.70e-09!130;UBERON:0000925!2.70e-09!130;UBERON:0006595!2.70e-09!130;UBERON:0001007!2.82e-09!128;UBERON:0001555!2.82e-09!128;UBERON:0007026!2.82e-09!128;UBERON:0004921!1.77e-08!126;UBERON:0004185!1.77e-08!126;UBERON:0009854!1.50e-07!23;UBERON:0009856!1.50e-07!23;UBERON:0000344!1.92e-07!15;UBERON:0003914!2.12e-07!47;UBERON:0002107!3.49e-07!22;UBERON:0007499!3.49e-07!22;UBERON:0006925!3.49e-07!22;UBERON:0009497!3.49e-07!22;UBERON:0000015!3.49e-07!22;UBERON:0002423!3.49e-07!22;UBERON:0006235!3.49e-07!22;UBERON:0008835!3.49e-07!22;UBERON:0003894!3.49e-07!22;UBERON:0004161!3.49e-07!22;UBERON:0008836!3.49e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.30e-11,47;UBERON:0000160,4.24e-10,31;UBERON:0009854,1.42e-07,23;UBERON:0009856,1.42e-07,23;UBERON:0003914,1.75e-07,47;UBERON:0000344,1.82e-07,15;UBERON:0002107,3.32e-07,22;UBERON:0007499,3.32e-07,22;UBERON:0006925,3.32e-07,22;UBERON:0009497,3.32e-07,22;UBERON:0000015,3.32e-07,22;UBERON:0002423,3.32e-07,22;UBERON:0006235,3.32e-07,22;UBERON:0008835,3.32e-07,22;UBERON:0003894,3.32e-07,22;UBERON:0004161,3.32e-07,22;UBERON:0008836,3.32e-07,22;UBERON:0004119,5.18e-07,118;UBERON:0000925,5.18e-07,118;UBERON:0006595,5.18e-07,118;UBERON:0001007,5.36e-07,116;UBERON:0001555,5.36e-07,116;UBERON:0007026,5.36e-07,116 | |||
|phase1_expression=2.40223270657191,123.188318896694,123.759793113954,92.2515844485832,114.705122157714,22.1600638923695,23.127651418957,0.387369970324729,0,0.234064526321993,0,0,0,0.0874204024189974,1.99865857089398,1.21485160433896,2.79824751251259,5.52058789376916,5.07323404341233,5.09267582157636,3.40173160604279,4.96454756004426,4.17919662622297,23.198901305044,23.1703373877842,77.5213151555277,66.3373474084975,61.4093013154784,27.5533958211742,36.54436881519,31.264002002398,17.7808588568697,20.2971379902908,0,2.59966457776147,4.48833542467929,3.67504841272264,0,2.3440060335714,0.523523743973798,0.588231488031014,0,0.485510353031154,0.251793635951155,0.101376931219515,0,5.47673941043627,4.79655344036982,0.878744730937887,0.777719596297134,3.3596741190087,5.75010257459886,2.85230430298152,0.725362142011344,0,2.57259436035947,3.43840127926508,2.06268836910977,3.23706337375356,2.11596391708813,3.80298842103708,2.71075625655306,1.77858959222228,0,0,0,1.49800055259202,2.68952813725088,0.933206510776299,1.21505344498522,0.420649922702764,4.57041575046086,2.87129103237098,2.44981598429908,3.45043695665651,3.67687514644008,0,2.93680877595932,3.22573719838111,2.50583946687368,2.92760459527711,4.16730696445408,1.11673199600552,2.25105044012672,2.59757021220577,2.65165726926301,2.70506193518296,4.47358669980721,1.21161909333094,22.9737542724628,2.31891590961342,10.3250865237766,2.719885334831,17.2705021324101,27.9403859502498,21.5052905806721,14.3253308534387,0,0,0,0.281686839553361,0,0,0,1.94841936910093,0.760079596425296,1.51657333504435,21.4665693871833,1.29468941823586,0,1.90833859442749,1.52232739156071,1.15307748628029,2.11011696773672,1.41106448562846,0.628332956648377,2.96633961281249,2.02439099687876,11.4999371753484,7.92657564742305,12.367125033782,8.727754556434,11.1835056730873,2.04946557908083,1.46612694769419,25.5457055208591,1.91704199209472,1.19980546198682,1.27070227073065,1.19832511523858,2.74500361691176,1.25654352112864,3.82413504423008,5.11430914660661,3.32460871295296,2.43361894601636,2.74966282395854,9.57933673697716,0.252722758433675,10.3116509384372,0.520481771850815,0.919608417733892,1.0803727788321,1.80845781402858,2.85753296435577,2.69038812598185,2.52994656311268,6.20888089773638,1.29340795759705,2.26927296201383,2.11141348996739,3.06874025398605,3.05851974148158,4.52727816478817,2.88094990971121,2.18937693500343,1.40442637462647,0.772043721344145,0.284163499395593,7.66365358381357,10.7881987591304,9.90341338035582,8.28606574548236,7.87056926989615,9.56456099901745,9.30135779001631,12.0723030629829,13.4280143722245,13.4939076929054,10.9992200932994,11.9981838127866,10.0877991323479,9.87975518809728,10.0654814070279,5.46753866266731,1.3377599609307,43.6152793538613,23.2716498663919,7.25180051819795,9.75394021813842,6.70110798874885,7.05892336181699,4.22518283305254,4.1849637744763,33.2170343081158,5.59976446061637,5.02670417600539,5.37182474511107,3.31438948102504,27.8634016682809,14.2651112917298,24.6935178835415,3.03468641524931,3.77020091612105,5.63538678365402,4.2766778847516,6.59438456369928,6.52263124979963,5.31186911843761,7.67572769493931,8.00693511991011,6.66344685177723,22.2339470315362,6.84064933435986,7.07612382407531,4.27238013531222,6.08580364165509,9.16473207059184,8.91190481234969,9.20627639842594,8.2688965655268,14.0026320725922,18.6898668485561,18.2349064357567,20.594486425561,22.2269412593458,15.0693827358406,19.2977408545347,4.61882975416512,3.60033682363921,3.7481944581666,4.58311731593008,3.52035372432753,5.3602002381381,6.66522194480839,7.61021226645415,8.82756806994669,6.42247599981447,6.53764551495697,9.01248230936559,8.11619414769709,7.95569822198314,0,0.54390568381871,0.491764273019036,0.551873492609465,1.44495530989013,1.99259867206745,0,16.6630811954886,3.47059041357882,1.56175497718655,1.50796378412959,1.19484398976276,1.78238939265915,1.98153571552183,2.42886421004937,2.63030272120181,1.18586333383957,9.63963949265421,2.6968616189571,6.58842733568844,6.67836533349662,3.46437258242324,11.9470624505967,11.8962511715941,9.06970670894253,7.54420319023592,8.56375489354241,11.0676653259814,7.49442050187841,7.99774204850512,7.12994756769443,3.47640433729398,11.5960469432499,4.12542172992747,4.76615448055303,0.18006109403131,1.29358683782755,0.857348140126369,1.41872186913819,1.60531935841864,2.63278432963394,1.522324745573,4.69343416127421,4.02480934641258,0,3.46261131177108,3.06782410722221,3.01564624640779,2.98430860007841,2.9545361954111,16.0314460146418,0.370850604021019,3.93003025835061,4.54051109519089,2.59272338317596,5.46268525313604,3.41735569302563,4.34678529092393,2.54967644990783,2.09927178485487,2.48759952847963,26.7307773044232,2.05618395827738,8.13277868507395,7.45236851670429,10.6635030967379,6.98760203987768,9.71023293970709,13.3898598275044,18.3229159388821,16.0722566881823,0,0,4.18646328923141,1.98550188548517,1.36115831840833,2.0665571756437,2.02747350588934,1.5256441023948,1.3020438484395,1.15345278868282,0.241584120826006,2.01621004380506,0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| |phase1_expression=2.40223270657191,123.188318896694,123.759793113954,92.2515844485832,114.705122157714,22.1600638923695,23.127651418957,0.387369970324729,0,0.234064526321993,0,0,0,0.0874204024189974,1.99865857089398,1.21485160433896,2.79824751251259,5.52058789376916,5.07323404341233,5.09267582157636,3.40173160604279,4.96454756004426,4.17919662622297,23.198901305044,23.1703373877842,77.5213151555277,66.3373474084975,61.4093013154784,27.5533958211742,36.54436881519,31.264002002398,17.7808588568697,20.2971379902908,0,2.59966457776147,4.48833542467929,3.67504841272264,0,2.3440060335714,0.523523743973798,0.588231488031014,0,0.485510353031154,0.251793635951155,0.101376931219515,0,5.47673941043627,4.79655344036982,0.878744730937887,0.777719596297134,3.3596741190087,5.75010257459886,2.85230430298152,0.725362142011344,0,2.57259436035947,3.43840127926508,2.06268836910977,3.23706337375356,2.11596391708813,3.80298842103708,2.71075625655306,1.77858959222228,0,0,0,1.49800055259202,2.68952813725088,0.933206510776299,1.21505344498522,0.420649922702764,4.57041575046086,2.87129103237098,2.44981598429908,3.45043695665651,3.67687514644008,0,2.93680877595932,3.22573719838111,2.50583946687368,2.92760459527711,4.16730696445408,1.11673199600552,2.25105044012672,2.59757021220577,2.65165726926301,2.70506193518296,4.47358669980721,1.21161909333094,22.9737542724628,2.31891590961342,10.3250865237766,2.719885334831,17.2705021324101,27.9403859502498,21.5052905806721,14.3253308534387,0,0,0,0.281686839553361,0,0,0,1.94841936910093,0.760079596425296,1.51657333504435,21.4665693871833,1.29468941823586,0,1.90833859442749,1.52232739156071,1.15307748628029,2.11011696773672,1.41106448562846,0.628332956648377,2.96633961281249,2.02439099687876,11.4999371753484,7.92657564742305,12.367125033782,8.727754556434,11.1835056730873,2.04946557908083,1.46612694769419,25.5457055208591,1.91704199209472,1.19980546198682,1.27070227073065,1.19832511523858,2.74500361691176,1.25654352112864,3.82413504423008,5.11430914660661,3.32460871295296,2.43361894601636,2.74966282395854,9.57933673697716,0.252722758433675,10.3116509384372,0.520481771850815,0.919608417733892,1.0803727788321,1.80845781402858,2.85753296435577,2.69038812598185,2.52994656311268,6.20888089773638,1.29340795759705,2.26927296201383,2.11141348996739,3.06874025398605,3.05851974148158,4.52727816478817,2.88094990971121,2.18937693500343,1.40442637462647,0.772043721344145,0.284163499395593,7.66365358381357,10.7881987591304,9.90341338035582,8.28606574548236,7.87056926989615,9.56456099901745,9.30135779001631,12.0723030629829,13.4280143722245,13.4939076929054,10.9992200932994,11.9981838127866,10.0877991323479,9.87975518809728,10.0654814070279,5.46753866266731,1.3377599609307,43.6152793538613,23.2716498663919,7.25180051819795,9.75394021813842,6.70110798874885,7.05892336181699,4.22518283305254,4.1849637744763,33.2170343081158,5.59976446061637,5.02670417600539,5.37182474511107,3.31438948102504,27.8634016682809,14.2651112917298,24.6935178835415,3.03468641524931,3.77020091612105,5.63538678365402,4.2766778847516,6.59438456369928,6.52263124979963,5.31186911843761,7.67572769493931,8.00693511991011,6.66344685177723,22.2339470315362,6.84064933435986,7.07612382407531,4.27238013531222,6.08580364165509,9.16473207059184,8.91190481234969,9.20627639842594,8.2688965655268,14.0026320725922,18.6898668485561,18.2349064357567,20.594486425561,22.2269412593458,15.0693827358406,19.2977408545347,4.61882975416512,3.60033682363921,3.7481944581666,4.58311731593008,3.52035372432753,5.3602002381381,6.66522194480839,7.61021226645415,8.82756806994669,6.42247599981447,6.53764551495697,9.01248230936559,8.11619414769709,7.95569822198314,0,0.54390568381871,0.491764273019036,0.551873492609465,1.44495530989013,1.99259867206745,0,16.6630811954886,3.47059041357882,1.56175497718655,1.50796378412959,1.19484398976276,1.78238939265915,1.98153571552183,2.42886421004937,2.63030272120181,1.18586333383957,9.63963949265421,2.6968616189571,6.58842733568844,6.67836533349662,3.46437258242324,11.9470624505967,11.8962511715941,9.06970670894253,7.54420319023592,8.56375489354241,11.0676653259814,7.49442050187841,7.99774204850512,7.12994756769443,3.47640433729398,11.5960469432499,4.12542172992747,4.76615448055303,0.18006109403131,1.29358683782755,0.857348140126369,1.41872186913819,1.60531935841864,2.63278432963394,1.522324745573,4.69343416127421,4.02480934641258,0,3.46261131177108,3.06782410722221,3.01564624640779,2.98430860007841,2.9545361954111,16.0314460146418,0.370850604021019,3.93003025835061,4.54051109519089,2.59272338317596,5.46268525313604,3.41735569302563,4.34678529092393,2.54967644990783,2.09927178485487,2.48759952847963,26.7307773044232,2.05618395827738,8.13277868507395,7.45236851670429,10.6635030967379,6.98760203987768,9.71023293970709,13.3898598275044,18.3229159388821,16.0722566881823,0,0,4.18646328923141,1.98550188548517,1.36115831840833,2.0665571756437,2.02747350588934,1.5256441023948,1.3020438484395,1.15345278868282,0.241584120826006,2.01621004380506,0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| ||
|short_description=p1@Kalrn | |||
}} | }} |
Latest revision as of 22:17, 1 October 2015
Short description: | p1@Kalrn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kalrn_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000023522, ENSMUST00000099959, ENSMUST00000114964, ENSMUST00000114973_5end |
EntrezGene: | Kalrn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.30e-11 | 47 |
intestine | 4.24e-10 | 31 |
digestive tract diverticulum | 1.42e-07 | 23 |
sac | 1.42e-07 | 23 |
epithelial tube | 1.75e-07 | 47 |
mucosa | 1.82e-07 | 15 |
liver | 3.32e-07 | 22 |
epithelial sac | 3.32e-07 | 22 |
digestive gland | 3.32e-07 | 22 |
epithelium of foregut-midgut junction | 3.32e-07 | 22 |
anatomical boundary | 3.32e-07 | 22 |
hepatobiliary system | 3.32e-07 | 22 |
foregut-midgut junction | 3.32e-07 | 22 |
hepatic diverticulum | 3.32e-07 | 22 |
liver primordium | 3.32e-07 | 22 |
septum transversum | 3.32e-07 | 22 |
liver bud | 3.32e-07 | 22 |
endoderm-derived structure | 5.18e-07 | 118 |
endoderm | 5.18e-07 | 118 |
presumptive endoderm | 5.18e-07 | 118 |
digestive system | 5.36e-07 | 116 |
digestive tract | 5.36e-07 | 116 |
primitive gut | 5.36e-07 | 116 |