FFCP PHASE1:Mm9::chr19:12770273..12770299,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=64697 | |EntrezGene=64697 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=307 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DCY0,D3Z4V9 | |UniProt=Q9DCY0,D3Z4V9 | ||
|association_with_transcript=0bp_to_ENSMUST00000025598,ENSMUST00000123407,ENSMUST00000128987,ENSMUST00000138545,ENSMUST00000152017,NM_029550,uc008gul.2,uc008gum.2_5end | |association_with_transcript=0bp_to_ENSMUST00000025598,ENSMUST00000123407,ENSMUST00000128987,ENSMUST00000138545,ENSMUST00000152017,NM_029550,uc008gul.2,uc008gum.2_5end | ||
|cluster_id=chr19:12770273..12770299,+ | |||
|description=CAGE_peak_1_at_Keg1_5end | |description=CAGE_peak_1_at_Keg1_5end | ||
|id=chr19:12770273..12770299,+ | |id=chr19:12770273..12770299,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!4.68e-24!49;UBERON:0005173!4.68e-24!49;UBERON:0002417!4.68e-24!49;UBERON:0000916!4.68e-24!49;UBERON:0002107!8.01e-19!22;UBERON:0007499!8.01e-19!22;UBERON:0006925!8.01e-19!22;UBERON:0009497!8.01e-19!22;UBERON:0000015!8.01e-19!22;UBERON:0002423!8.01e-19!22;UBERON:0006235!8.01e-19!22;UBERON:0008835!8.01e-19!22;UBERON:0003894!8.01e-19!22;UBERON:0004161!8.01e-19!22;UBERON:0008836!8.01e-19!22;UBERON:0009854!1.28e-17!23;UBERON:0009856!1.28e-17!23;UBERON:0002365!1.65e-15!25;UBERON:0002330!1.65e-15!25;UBERON:0009569!2.11e-15!66;UBERON:0005256!9.77e-11!47;UBERON:0002113!1.35e-10!14;UBERON:0003918!1.35e-10!14;UBERON:0005095!1.35e-10!14;UBERON:0007687!1.35e-10!14;UBERON:0005177!1.99e-10!85;UBERON:0006554!1.08e-08!16;UBERON:0001008!6.38e-08!17;UBERON:0002100!3.00e-07!98;UBERON:0003914!3.87e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.89e-23,49;UBERON:0005173,3.89e-23,49;UBERON:0002417,3.89e-23,49;UBERON:0000916,3.89e-23,49;UBERON:0002107,9.43e-20,22;UBERON:0007499,9.43e-20,22;UBERON:0006925,9.43e-20,22;UBERON:0009497,9.43e-20,22;UBERON:0000015,9.43e-20,22;UBERON:0002423,9.43e-20,22;UBERON:0006235,9.43e-20,22;UBERON:0008835,9.43e-20,22;UBERON:0003894,9.43e-20,22;UBERON:0004161,9.43e-20,22;UBERON:0008836,9.43e-20,22;UBERON:0009854,1.38e-18,23;UBERON:0009856,1.38e-18,23;UBERON:0002365,1.52e-16,25;UBERON:0002330,1.52e-16,25;UBERON:0003104,2.71e-16,61;UBERON:0009142,2.71e-16,61;UBERON:0009569,3.29e-14,66;UBERON:0002113,2.18e-11,14;UBERON:0003918,2.18e-11,14;UBERON:0011143,2.18e-11,14;UBERON:0005095,2.18e-11,14;UBERON:0007687,2.18e-11,14;UBERON:0005256,2.62e-10,45;UBERON:0005177,4.20e-10,79;UBERON:0006554,4.66e-08,18;UBERON:0002100,1.21e-07,90;UBERON:0001008,1.87e-07,19;UBERON:0003914,2.56e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,149.080887634825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,506.789663542037,70.7170187056061,1018.9596258122,698.509648756244,774.190460904196,250.693289935177,0,0,0,0,0,0,0,0,0,0,239.900331289745,0,1.33597925158342,0.173485326766136,0.608930956624282,1.84492397804847,0.60289056221049,0,1.13099932196708,1.73036477414062,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54598409625791,0.870848794270651,3.28539585963777,0,0,0,0,1.05493372485001,0,0,0,0,0,0,0,0,0.278047249225598,0,0,4.77682240364384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0,1.03093969057675,3.42861991859682,1.77902435075896,1.90225626112559,0,0,0.251335208800269,0.397912944082302,0,0,0,0,4.93136542478012,23.5351935976041,61.9892546201942,58.6515824194505,107.255725403697,110.18337304769,109.968338059083,534.34873568616,584.820261209121,543.317712747688,271.254153784741,0.333690211432188,1.17935397067922,2.9232074610031,5.07150303471257,7.23531479257251,16.8053062175737,27.331133057827,4.37765112292595,23.8868429473631,40.2550978276593,43.5404908772149,68.3362504120888,38.1394105700139,276.989606477832,63.6825448199645,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0,0,3.73937767701236,2.28041743095006,0,0,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.324016022465404,0.209088296014469,0.87345025498471,0.404593039154462,3.55409859618945,0,0,0,1.69107881605257,0,0,0,0.645799117388655,0,0.704143431874524,1.43224823328345,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,2.18796045361465,1.67690530102386,2.75765262675021,4.4449345560323,4.32673620201678,5.45562656306086,4.29585259998456,5.57654459758527,4.33840585187975,4.40115085108447,4.03358460150676,4.88201486122713,2.85776214769844,3.70829843023538,2.31491064556446,4.12085900803307,3.53277408322554,5.14303878578123,4.2594193478241,3.81497903915713,5.0871245821315,4.23492211868988,4.06150117880047,4.75612729469209,2.10455769150274,3.80251518768413,4.48913817326191,2.96587545310435,3.25064791839359,3.6830793885272,4.33823155320705,4.82266527452853,0,3.04111090979031,5.58664740525576,0,1.10295709559758,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,149.080887634825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,506.789663542037,70.7170187056061,1018.9596258122,698.509648756244,774.190460904196,250.693289935177,0,0,0,0,0,0,0,0,0,0,239.900331289745,0,1.33597925158342,0.173485326766136,0.608930956624282,1.84492397804847,0.60289056221049,0,1.13099932196708,1.73036477414062,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54598409625791,0.870848794270651,3.28539585963777,0,0,0,0,1.05493372485001,0,0,0,0,0,0,0,0,0.278047249225598,0,0,4.77682240364384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0,1.03093969057675,3.42861991859682,1.77902435075896,1.90225626112559,0,0,0.251335208800269,0.397912944082302,0,0,0,0,4.93136542478012,23.5351935976041,61.9892546201942,58.6515824194505,107.255725403697,110.18337304769,109.968338059083,534.34873568616,584.820261209121,543.317712747688,271.254153784741,0.333690211432188,1.17935397067922,2.9232074610031,5.07150303471257,7.23531479257251,16.8053062175737,27.331133057827,4.37765112292595,23.8868429473631,40.2550978276593,43.5404908772149,68.3362504120888,38.1394105700139,276.989606477832,63.6825448199645,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0,0,3.73937767701236,2.28041743095006,0,0,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.324016022465404,0.209088296014469,0.87345025498471,0.404593039154462,3.55409859618945,0,0,0,1.69107881605257,0,0,0,0.645799117388655,0,0.704143431874524,1.43224823328345,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,2.18796045361465,1.67690530102386,2.75765262675021,4.4449345560323,4.32673620201678,5.45562656306086,4.29585259998456,5.57654459758527,4.33840585187975,4.40115085108447,4.03358460150676,4.88201486122713,2.85776214769844,3.70829843023538,2.31491064556446,4.12085900803307,3.53277408322554,5.14303878578123,4.2594193478241,3.81497903915713,5.0871245821315,4.23492211868988,4.06150117880047,4.75612729469209,2.10455769150274,3.80251518768413,4.48913817326191,2.96587545310435,3.25064791839359,3.6830793885272,4.33823155320705,4.82266527452853,0,3.04111090979031,5.58664740525576,0,1.10295709559758,0.231867835620421 | ||
|short_description=p1@Keg1 | |short_description=p1@Keg1 | ||
}} | }} |
Latest revision as of 22:33, 1 October 2015
Short description: | p1@Keg1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Keg1_5end |
Coexpression cluster: | MCL_coexpression_mm9:307 |
Association with transcript: | 0bp_to_ENSMUST00000025598, ENSMUST00000123407, ENSMUST00000128987, ENSMUST00000138545, ENSMUST00000152017, NM_029550, uc008gul.2, uc008gum.2_5end |
EntrezGene: | Keg1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 3.89e-23 | 49 |
abdominal segment element | 3.89e-23 | 49 |
abdominal segment of trunk | 3.89e-23 | 49 |
abdomen | 3.89e-23 | 49 |
liver | 9.43e-20 | 22 |
epithelial sac | 9.43e-20 | 22 |
digestive gland | 9.43e-20 | 22 |
epithelium of foregut-midgut junction | 9.43e-20 | 22 |
anatomical boundary | 9.43e-20 | 22 |
hepatobiliary system | 9.43e-20 | 22 |
foregut-midgut junction | 9.43e-20 | 22 |
hepatic diverticulum | 9.43e-20 | 22 |
liver primordium | 9.43e-20 | 22 |
septum transversum | 9.43e-20 | 22 |
liver bud | 9.43e-20 | 22 |
digestive tract diverticulum | 1.38e-18 | 23 |
sac | 1.38e-18 | 23 |
exocrine gland | 1.52e-16 | 25 |
exocrine system | 1.52e-16 | 25 |
mesenchyme | 2.71e-16 | 61 |
entire embryonic mesenchyme | 2.71e-16 | 61 |
subdivision of trunk | 3.29e-14 | 66 |
kidney | 2.18e-11 | 14 |
kidney mesenchyme | 2.18e-11 | 14 |
upper urinary tract | 2.18e-11 | 14 |
kidney rudiment | 2.18e-11 | 14 |
kidney field | 2.18e-11 | 14 |
trunk mesenchyme | 2.62e-10 | 45 |
trunk region element | 4.20e-10 | 79 |
urinary system structure | 4.66e-08 | 18 |
trunk | 1.21e-07 | 90 |
renal system | 1.87e-07 | 19 |
epithelial tube | 2.56e-07 | 47 |