FFCP PHASE1:Mm9::chr2:116946596..116946618,+: Difference between revisions
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{{FFCP|EntrezGene=114715|HGNC=|MCL_coexpression_id=361|UniProt=Q924S8|association_with_transcript=-491bp_to_ENSMUST00000028829_5end|description=CAGE_peak_2_at_Spred1_5end|id=chr2:116946596..116946618,+|ontology_enrichment_celltype=CL:0000107!9.88e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,9.08e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.19e-13!102;UBERON:0000924!2.19e-13!102;UBERON:0006601!2.19e-13!102;UBERON:0002346!9.45e-09!71;UBERON:0003075!9.45e-09!71;UBERON:0007284!9.45e-09!71;UBERON:0000073!1.55e-08!75;UBERON:0001016!1.55e-08!75;UBERON:0001017!6.46e-08!73;UBERON:0005743!6.46e-08!73;UBERON:0005157!6.54e-08!27;UBERON:0002342!8.60e-08!10;UBERON:0005062!8.60e-08!10;UBERON:0000010!2.20e-07!11;UBERON:0002410!9.88e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.41e-10,95;UBERON:0000924,8.41e-10,95;UBERON:0006601,8.41e-10,95;UBERON:0001016,1.73e-08,75;UBERON:0010314,6.39e-08,92;UBERON:0001017,7.23e-08,73;UBERON:0000010,2.01e-07,11;UBERON:0002410,9.08e-07,9|phase1_expression=5.44506080156299,0,0,0,1.00179145989269,1.00727563147134,0.467225281191051,0.129123323441576,0.985521055061667,0.70219357896598,0.171217968225505,0.239316476986009,0,0.0874204024189974,0.333109761815663,0.404950534779652,0,0.315462165358238,0.411343300817216,0,3.40173160604279,0.397163804803541,0.522399578277871,0.159992422793407,0.22940928106717,0,0.430761996159075,0,0.380046838912748,0.252030129759931,0.221730510655305,1.90509202037889,1.23012957516914,0,0,0.332469290716985,0.612508068787107,0,0,0,0,0,0.485510353031154,3.9028013572429,4.96746962975621,4.58866880404204,1.56478268869608,2.61630187656536,3.95435128922049,2.72201858703997,4.89952475688769,8.62515386189829,0.167782606057736,0,0.336093799142464,4.3734104126111,6.01720223871389,8.25075347643908,3.64169629547276,3.70293685490423,2.53532561402472,7.45457970552091,3.55717918444456,3.1496490104849,7.9109309005358,5.6838409195688,8.68840320503374,4.2264013585371,2.69592992002042,2.02508907497536,2.52389953621658,1.71390590642282,3.09215957332259,1.83736198822431,0.958454710182364,3.67687514644008,1.10115880999389,4.21368215681119,5.83704826373725,1.71452174049252,1.64677758484337,1.04182674111352,2.23346399201105,7.31591393041184,3.81995619442025,5.89257170947335,4.6982654663704,3.72798891650601,5.6794644999888,11.638020256445,5.79728977403356,2.58127163094416,6.79971333707751,2.69851595818909,1.29955283489534,1.34408066129201,2.24711072210803,6.47635225796619,4.93593408745451,3.18005617059306,6.33795388995062,5.13305909657271,5.09610479413291,7.11066703153331,0.865964164044856,1.52015919285059,0.505524445014783,1.94112595522402,1.03575153458869,14.5473296283528,11.450031566565,12.7875500891099,16.8349312996923,13.565037649736,10.347806227942,18.975655290781,1.73036477414062,2.60278842455841,0.884610551949874,8.08834249737046,6.18356251689102,4.84875253135222,1.86391761218122,3.51336956413857,5.02672096352292,1.02182822083437,5.15205035375457,2.99951365496704,2.54140454146129,7.9389038884556,10.980014467647,2.63874139437015,9.90798625095976,10.7400492078739,6.85700547046548,5.84068547043927,5.49932564791708,4.47865094196335,1.51633655060205,1.68353484709179,6.76626303406059,5.74755261083682,6.30217454318722,6.32960234910003,4.35433594568498,6.53379973452734,6.74652416830048,3.3631438196072,6.68260778091811,6.99692496620931,7.03804496655795,8.11024209982027,5.56094498451196,10.0993128291428,6.37924622864625,5.9710280045548,0,1.28673953557358,1.13665399758237,4.76389276831654,2.11073453982987,3.06105504483725,3.31442629819294,3.93528463494808,3.70241070929708,3.48800917125612,5.633741429392,3.26942958628075,4.60767579757745,3.2833492815819,2.67527071501324,1.46199987425332,1.53685080703735,2.41571553768669,4.41608891984667,2.6755199218614,0,0.528901133327089,2.55945900642281,3.0190767341857,4.51036114627327,3.02525286935014,1.33426826306922,2.28270751335071,0.474529061544512,0.988193728344065,3.51869292320377,2.78539060857611,1.75467678407208,0.898819408654221,1.08069024937347,1.1948476395262,5.69003702859245,5.25543158004753,6.76246414038483,4.07302655690629,2.71533482034676,5.82127305089644,3.73095569033118,1.47610147979602,1.41298855057237,2.46794327843601,2.07516838961004,1.83529616287703,2.35870794135844,0.674586337154561,0.811440485554012,0.482354319504834,1.01850340712568,0.575392274901621,0.810676133875177,2.19649130550465,7.18841032636773,1.48856379067401,3.12037673114561,4.04126204715379,0.896987067609561,1.4473305640901,2.21703828199926,4.54779388249163,6.35563408123901,3.90413697282933,7.04070744865506,7.53778158488171,7.85544014923845,6.63454402716516,8.19702749352193,5.97954662051692,6.218735977642,5.73521601505083,3.7990696010497,5.64131328467895,1.50791283939272,1.63171705145613,2.45882136509518,1.65562047782839,7.38532713943843,6.09500770279457,1.63934945376675,2.52470927204373,12.6203287766503,7.02789739733949,10.9865932843727,13.6212214832955,10.4715376818725,12.4553673547086,8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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=114715 | |||
|HGNC= | |||
|MCL_coexpression_id=361 | |||
|TSSclassifier=NA | |||
|UniProt=Q924S8 | |||
|association_with_transcript=-491bp_to_ENSMUST00000028829_5end | |||
|cluster_id=chr2:116946596..116946618,+ | |||
|description=CAGE_peak_2_at_Spred1_5end | |||
|id=chr2:116946596..116946618,+ | |||
|ontology_enrichment_celltype=CL:0000107!9.88e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,9.08e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.19e-13!102;UBERON:0000924!2.19e-13!102;UBERON:0006601!2.19e-13!102;UBERON:0002346!9.45e-09!71;UBERON:0003075!9.45e-09!71;UBERON:0007284!9.45e-09!71;UBERON:0000073!1.55e-08!75;UBERON:0001016!1.55e-08!75;UBERON:0001017!6.46e-08!73;UBERON:0005743!6.46e-08!73;UBERON:0005157!6.54e-08!27;UBERON:0002342!8.60e-08!10;UBERON:0005062!8.60e-08!10;UBERON:0000010!2.20e-07!11;UBERON:0002410!9.88e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.41e-10,95;UBERON:0000924,8.41e-10,95;UBERON:0006601,8.41e-10,95;UBERON:0001016,1.73e-08,75;UBERON:0010314,6.39e-08,92;UBERON:0001017,7.23e-08,73;UBERON:0000010,2.01e-07,11;UBERON:0002410,9.08e-07,9 | |||
|phase1_expression=5.44506080156299,0,0,0,1.00179145989269,1.00727563147134,0.467225281191051,0.129123323441576,0.985521055061667,0.70219357896598,0.171217968225505,0.239316476986009,0,0.0874204024189974,0.333109761815663,0.404950534779652,0,0.315462165358238,0.411343300817216,0,3.40173160604279,0.397163804803541,0.522399578277871,0.159992422793407,0.22940928106717,0,0.430761996159075,0,0.380046838912748,0.252030129759931,0.221730510655305,1.90509202037889,1.23012957516914,0,0,0.332469290716985,0.612508068787107,0,0,0,0,0,0.485510353031154,3.9028013572429,4.96746962975621,4.58866880404204,1.56478268869608,2.61630187656536,3.95435128922049,2.72201858703997,4.89952475688769,8.62515386189829,0.167782606057736,0,0.336093799142464,4.3734104126111,6.01720223871389,8.25075347643908,3.64169629547276,3.70293685490423,2.53532561402472,7.45457970552091,3.55717918444456,3.1496490104849,7.9109309005358,5.6838409195688,8.68840320503374,4.2264013585371,2.69592992002042,2.02508907497536,2.52389953621658,1.71390590642282,3.09215957332259,1.83736198822431,0.958454710182364,3.67687514644008,1.10115880999389,4.21368215681119,5.83704826373725,1.71452174049252,1.64677758484337,1.04182674111352,2.23346399201105,7.31591393041184,3.81995619442025,5.89257170947335,4.6982654663704,3.72798891650601,5.6794644999888,11.638020256445,5.79728977403356,2.58127163094416,6.79971333707751,2.69851595818909,1.29955283489534,1.34408066129201,2.24711072210803,6.47635225796619,4.93593408745451,3.18005617059306,6.33795388995062,5.13305909657271,5.09610479413291,7.11066703153331,0.865964164044856,1.52015919285059,0.505524445014783,1.94112595522402,1.03575153458869,14.5473296283528,11.450031566565,12.7875500891099,16.8349312996923,13.565037649736,10.347806227942,18.975655290781,1.73036477414062,2.60278842455841,0.884610551949874,8.08834249737046,6.18356251689102,4.84875253135222,1.86391761218122,3.51336956413857,5.02672096352292,1.02182822083437,5.15205035375457,2.99951365496704,2.54140454146129,7.9389038884556,10.980014467647,2.63874139437015,9.90798625095976,10.7400492078739,6.85700547046548,5.84068547043927,5.49932564791708,4.47865094196335,1.51633655060205,1.68353484709179,6.76626303406059,5.74755261083682,6.30217454318722,6.32960234910003,4.35433594568498,6.53379973452734,6.74652416830048,3.3631438196072,6.68260778091811,6.99692496620931,7.03804496655795,8.11024209982027,5.56094498451196,10.0993128291428,6.37924622864625,5.9710280045548,0,1.28673953557358,1.13665399758237,4.76389276831654,2.11073453982987,3.06105504483725,3.31442629819294,3.93528463494808,3.70241070929708,3.48800917125612,5.633741429392,3.26942958628075,4.60767579757745,3.2833492815819,2.67527071501324,1.46199987425332,1.53685080703735,2.41571553768669,4.41608891984667,2.6755199218614,0,0.528901133327089,2.55945900642281,3.0190767341857,4.51036114627327,3.02525286935014,1.33426826306922,2.28270751335071,0.474529061544512,0.988193728344065,3.51869292320377,2.78539060857611,1.75467678407208,0.898819408654221,1.08069024937347,1.1948476395262,5.69003702859245,5.25543158004753,6.76246414038483,4.07302655690629,2.71533482034676,5.82127305089644,3.73095569033118,1.47610147979602,1.41298855057237,2.46794327843601,2.07516838961004,1.83529616287703,2.35870794135844,0.674586337154561,0.811440485554012,0.482354319504834,1.01850340712568,0.575392274901621,0.810676133875177,2.19649130550465,7.18841032636773,1.48856379067401,3.12037673114561,4.04126204715379,0.896987067609561,1.4473305640901,2.21703828199926,4.54779388249163,6.35563408123901,3.90413697282933,7.04070744865506,7.53778158488171,7.85544014923845,6.63454402716516,8.19702749352193,5.97954662051692,6.218735977642,5.73521601505083,3.7990696010497,5.64131328467895,1.50791283939272,1.63171705145613,2.45882136509518,1.65562047782839,7.38532713943843,6.09500770279457,1.63934945376675,2.52470927204373,12.6203287766503,7.02789739733949,10.9865932843727,13.6212214832955,10.4715376818725,12.4553673547086,8.09621403349789,9.9366991689846,9.48690667071656,8.35435422696698,4.40014264145633,5.52003371368491,5.70104357737516,3.79431282836832,1.32745138339963,2.42780636154981,1.51161778482376,2.07465587731488,2.06711325016541,3.99665692327106,4.13485269069154,1.81766864738753,3.92147116223193,2.21225730555071,3.16255825724996,3.09406629744561,1.70219802876894,7.74262704334634,5.56242340265844,4.71541477069503,8.15765074754458,6.59964625127661,4.44282355625727,3.04464949114599,0.938686832254841,1.27099242518292,3.52845436887939,4.28704257647848,7.42736362801165,7.35817684123501,4.77489376012546,6.89391778929257,1.45740418314925,5.37733375830478,0.854354403989263,5.57244543500701,2.03713980106683,0.753473828018764,0.956859594047176,0.686334519619568,6.11922347977879,5.87796099759364,4.83699908315483,0.954670618015114,6.80122386199441,4.47302827679067,2.48412283890143,2.29997125615916,1.52853794622324,1.88810084938749,3.2234847732881,1.30877970992015,2.33306951925227,3.10669656543463,1.12738587736838,7.92437694033088,5.29467169462712,3.69457257853691,2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| |||
|short_description=p2@Spred1 | |||
}} |
Latest revision as of 00:24, 2 October 2015
Short description: | p2@Spred1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Spred1_5end |
Coexpression cluster: | MCL_coexpression_mm9:361 |
Association with transcript: | -491bp_to_ENSMUST00000028829_5end |
EntrezGene: | Spred1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 9.08e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 8.41e-10 | 95 |
ectoderm | 8.41e-10 | 95 |
presumptive ectoderm | 8.41e-10 | 95 |
nervous system | 1.73e-08 | 75 |
structure with developmental contribution from neural crest | 6.39e-08 | 92 |
central nervous system | 7.23e-08 | 73 |
peripheral nervous system | 2.01e-07 | 11 |
autonomic nervous system | 9.08e-07 | 9 |