FFCP PHASE1:Mm9::chr18:60819859..60819885,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=104027 | |EntrezGene=104027 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-63bp_to_ENSMUST00000137894_5end | |association_with_transcript=-63bp_to_ENSMUST00000137894_5end | ||
|cluster_id=chr18:60819859..60819885,- | |||
|description=CAGE_peak_6_at_Synpo_5end | |description=CAGE_peak_6_at_Synpo_5end | ||
|id=chr18:60819859..60819885,- | |id=chr18:60819859..60819885,- | ||
|ontology_enrichment_celltype=CL:0002563!1.38e-08!9;CL:0002251!1.38e-08!9;CL:0000239!1.36e-07!6;CL:0000677!1.36e-07!6;CL:0000212!1.36e-07!6;CL:0000584!1.36e-07!6 | |ontology_enrichment_celltype=CL:0002563!1.38e-08!9;CL:0002251!1.38e-08!9;CL:0000239!1.36e-07!6;CL:0000677!1.36e-07!6;CL:0000212!1.36e-07!6;CL:0000584!1.36e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.93e-11,6;CL:0000677,2.93e-11,6;CL:0000584,2.93e-11,6;CL:0000075,1.64e-09,7;CL:0002563,3.48e-07,9;CL:0002251,3.48e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.27e-19!43;UBERON:0005409!6.34e-17!59;UBERON:0000344!3.45e-14!15;UBERON:0001242!1.98e-12!13;UBERON:0000060!1.98e-12!13;UBERON:0001262!1.98e-12!13;UBERON:0004786!1.98e-12!13;UBERON:0003350!1.38e-08!9;UBERON:0004808!1.38e-08!9;UBERON:0001277!1.38e-08!9;UBERON:0004923!5.18e-08!24;UBERON:0001007!3.68e-07!128;UBERON:0001555!3.68e-07!128;UBERON:0007026!3.68e-07!128;UBERON:0004119!7.60e-07!130;UBERON:0000925!7.60e-07!130;UBERON:0006595!7.60e-07!130 | |ontology_enrichment_uberon=UBERON:0000160!5.27e-19!43;UBERON:0005409!6.34e-17!59;UBERON:0000344!3.45e-14!15;UBERON:0001242!1.98e-12!13;UBERON:0000060!1.98e-12!13;UBERON:0001262!1.98e-12!13;UBERON:0004786!1.98e-12!13;UBERON:0003350!1.38e-08!9;UBERON:0004808!1.38e-08!9;UBERON:0001277!1.38e-08!9;UBERON:0004923!5.18e-08!24;UBERON:0001007!3.68e-07!128;UBERON:0001555!3.68e-07!128;UBERON:0007026!3.68e-07!128;UBERON:0004119!7.60e-07!130;UBERON:0000925!7.60e-07!130;UBERON:0006595!7.60e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.79e-36,31;UBERON:0005409,3.08e-25,47;UBERON:0000344,1.54e-15,15;UBERON:0001242,7.83e-13,13;UBERON:0001262,7.83e-13,13;UBERON:0004786,7.83e-13,13;UBERON:0001007,3.40e-09,116;UBERON:0001555,3.40e-09,116;UBERON:0007026,3.40e-09,116;UBERON:0004119,6.74e-09,118;UBERON:0000925,6.74e-09,118;UBERON:0006595,6.74e-09,118;UBERON:0004923,1.39e-08,24;UBERON:0004921,6.47e-08,114;UBERON:0002108,1.36e-07,4;UBERON:0003350,3.48e-07,9;UBERON:0004808,3.48e-07,9;UBERON:0001277,3.48e-07,9 | |||
|phase1_expression=0,34.5485653562967,16.3799726180233,30.5488853419898,33.0591181764589,2.35030980676646,1.40167584357315,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,4.47978783821539,2.52350209173887,8.6134794617253,9.90752591165872,9.26526300549323,5.32065574477847,6.30075324399827,4.43461021310609,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,1.29955283489534,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0,0,0,0,0,0,0.125666591329675,0.494389935468748,0,0,0,0,0.484875253135222,13.0474232852686,0,0,13.2837668708468,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,43.2848605708775,24.8583532663732,0,0,1.41754207454303,10.6892268050372,14.0098167622268,13.6962450801043,27.5226855695817,19.9285735216053,24.6308504624264,17.9060824837036,18.9115164505547,19.7740269903929,15.1296634912286,13.7407478545513,0,0,0,0,0,0,0,0.147610147979602,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0.505157755894224,1.07638448113147,0.482443521363367,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,4.65170927702798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.8610627472388,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0,0.87345025498471,0.539457385539283,0.661227645802687,1.30877970992015,9.72112299688447,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666740183404846,1.44224540067226,0.962757628775446,0.252697211763798,1.77435509923168,1.13175804831646,0.468207537349412,1.60062881012173,1.55075766180156,2.85776214769844,1.39061191133827,0.578727661391115,1.23625770240992,1.03039244094078,1.37147700954166,0.532427418478012,1.1921809497366,0.726732083161643,1.2234219453993,0.846146078916765,1.09756783723664,0.789209134313529,1.22223702461276,0.561142271657738,0.830445126869219,0.591026894253381,1.22769312950907,0.464810523557898,0.385813221962283,0,0.935726433781634,1.07435527024149,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,34.5485653562967,16.3799726180233,30.5488853419898,33.0591181764589,2.35030980676646,1.40167584357315,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,4.47978783821539,2.52350209173887,8.6134794617253,9.90752591165872,9.26526300549323,5.32065574477847,6.30075324399827,4.43461021310609,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,1.29955283489534,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0,0,0,0,0,0,0.125666591329675,0.494389935468748,0,0,0,0,0.484875253135222,13.0474232852686,0,0,13.2837668708468,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,43.2848605708775,24.8583532663732,0,0,1.41754207454303,10.6892268050372,14.0098167622268,13.6962450801043,27.5226855695817,19.9285735216053,24.6308504624264,17.9060824837036,18.9115164505547,19.7740269903929,15.1296634912286,13.7407478545513,0,0,0,0,0,0,0,0.147610147979602,0,0,0.592905254174298,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0.505157755894224,1.07638448113147,0.482443521363367,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,4.65170927702798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.8610627472388,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0,0.87345025498471,0.539457385539283,0.661227645802687,1.30877970992015,9.72112299688447,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666740183404846,1.44224540067226,0.962757628775446,0.252697211763798,1.77435509923168,1.13175804831646,0.468207537349412,1.60062881012173,1.55075766180156,2.85776214769844,1.39061191133827,0.578727661391115,1.23625770240992,1.03039244094078,1.37147700954166,0.532427418478012,1.1921809497366,0.726732083161643,1.2234219453993,0.846146078916765,1.09756783723664,0.789209134313529,1.22223702461276,0.561142271657738,0.830445126869219,0.591026894253381,1.22769312950907,0.464810523557898,0.385813221962283,0,0.935726433781634,1.07435527024149,0.191288332068843,0,0.231867835620421 | ||
|short_description=p6@Synpo | |short_description=p6@Synpo | ||
}} | }} |
Latest revision as of 13:18, 1 October 2015
Short description: | p6@Synpo |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Synpo_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -63bp_to_ENSMUST00000137894_5end |
EntrezGene: | Synpo |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.93e-11 | 6 |
gut absorptive cell | 2.93e-11 | 6 |
enterocyte | 2.93e-11 | 6 |
columnar/cuboidal epithelial cell | 1.64e-09 | 7 |
intestinal epithelial cell | 3.48e-07 | 9 |
epithelial cell of alimentary canal | 3.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.79e-36 | 31 |
gastrointestinal system | 3.08e-25 | 47 |
mucosa | 1.54e-15 | 15 |
intestinal mucosa | 7.83e-13 | 13 |
wall of intestine | 7.83e-13 | 13 |
gastrointestinal system mucosa | 7.83e-13 | 13 |
digestive system | 3.40e-09 | 116 |
digestive tract | 3.40e-09 | 116 |
primitive gut | 3.40e-09 | 116 |
endoderm-derived structure | 6.74e-09 | 118 |
endoderm | 6.74e-09 | 118 |
presumptive endoderm | 6.74e-09 | 118 |
organ component layer | 1.39e-08 | 24 |
subdivision of digestive tract | 6.47e-08 | 114 |
small intestine | 1.36e-07 | 4 |
epithelium of mucosa | 3.48e-07 | 9 |
gastrointestinal system epithelium | 3.48e-07 | 9 |
intestinal epithelium | 3.48e-07 | 9 |