FFCP PHASE1:Mm9::chr1:72827387..72827393,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=148 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:72827387..72827393,- | |||
|description=CAGE_peak_at_chr1:72827387..72827393,- | |description=CAGE_peak_at_chr1:72827387..72827393,- | ||
|id=chr1:72827387..72827393,- | |id=chr1:72827387..72827393,- | ||
|ontology_enrichment_celltype=CL:0002604!2.51e-15!2;CL:0002605!2.51e-15!2;CL:0000128!2.52e-11!6;CL:0000126!2.52e-11!6;CL:0000127!2.52e-11!6;CL:0002453!1.26e-08!8;CL:0000006!6.57e-08!1;CL:0002374!6.57e-08!1;CL:0000202!6.57e-08!1;CL:0000199!6.57e-08!1;CL:0000855!6.57e-08!1;CL:0000589!6.57e-08!1;CL:0000333!5.37e-07!10;CL:0000095!5.37e-07!10;CL:0000243!5.37e-07!10;CL:0000123!5.37e-07!10;CL:0000125!5.37e-07!10;CL:0000030!5.37e-07!10;CL:0000339!5.37e-07!10 | |ontology_enrichment_celltype=CL:0002604!2.51e-15!2;CL:0002605!2.51e-15!2;CL:0000128!2.52e-11!6;CL:0000126!2.52e-11!6;CL:0000127!2.52e-11!6;CL:0002453!1.26e-08!8;CL:0000006!6.57e-08!1;CL:0002374!6.57e-08!1;CL:0000202!6.57e-08!1;CL:0000199!6.57e-08!1;CL:0000855!6.57e-08!1;CL:0000589!6.57e-08!1;CL:0000333!5.37e-07!10;CL:0000095!5.37e-07!10;CL:0000243!5.37e-07!10;CL:0000123!5.37e-07!10;CL:0000125!5.37e-07!10;CL:0000030!5.37e-07!10;CL:0000339!5.37e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.87e-86,2;CL:0002604,1.87e-86,2;CL:0000128,6.66e-30,6;CL:0000126,6.66e-30,6;CL:0000127,6.66e-30,6;CL:0002453,8.41e-23,8;CL:0000333,1.57e-18,10;CL:0000095,1.57e-18,10;CL:0000243,1.57e-18,10;CL:0000123,1.57e-18,10;CL:0000125,1.57e-18,10;CL:0000030,1.57e-18,10;CL:0000339,1.57e-18,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001255!2.98e-08!1;UBERON:0001556!2.98e-08!1 | |ontology_enrichment_uberon=UBERON:0001255!2.98e-08!1;UBERON:0001556!2.98e-08!1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,7.57e-26,7;UBERON:0003022,7.57e-26,7;UBERON:0002421,7.57e-26,7;UBERON:0000349,7.57e-26,7;UBERON:0002600,7.57e-26,7;UBERON:0002619,1.86e-11,17;UBERON:0000956,1.61e-09,21;UBERON:0001869,1.61e-09,21;UBERON:0000203,1.61e-09,21;UBERON:0003528,3.14e-07,29;UBERON:0002791,3.14e-07,29;UBERON:0001893,3.14e-07,29 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,5.4921545683618,5.8328969722285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0.260240885925407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,5.4921545683618,5.8328969722285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0.260240885925407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr1:72827387..72827393,- | |short_description=p@chr1:72827387..72827393,- | ||
}} | }} |
Latest revision as of 23:12, 5 August 2015
Short description: | p@chr1:72827387..72827393, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72827387..72827393, - |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.87e-86 | 2 |
astrocyte of the hippocampus | 1.87e-86 | 2 |
oligodendrocyte | 6.66e-30 | 6 |
macroglial cell | 6.66e-30 | 6 |
astrocyte | 6.66e-30 | 6 |
oligodendrocyte precursor cell | 8.41e-23 | 8 |
migratory neural crest cell | 1.57e-18 | 10 |
neuron associated cell | 1.57e-18 | 10 |
glial cell (sensu Vertebrata) | 1.57e-18 | 10 |
neuron associated cell (sensu Vertebrata) | 1.57e-18 | 10 |
glial cell | 1.57e-18 | 10 |
glioblast | 1.57e-18 | 10 |
glioblast (sensu Vertebrata) | 1.57e-18 | 10 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 7.57e-26 | 7 |
lobe parts of cerebral cortex | 7.57e-26 | 7 |
hippocampal formation | 7.57e-26 | 7 |
limbic system | 7.57e-26 | 7 |
limbic lobe | 7.57e-26 | 7 |
regional part of cerebral cortex | 1.86e-11 | 17 |
cerebral cortex | 1.61e-09 | 21 |
cerebral hemisphere | 1.61e-09 | 21 |
pallium | 1.61e-09 | 21 |
brain grey matter | 3.14e-07 | 29 |
regional part of telencephalon | 3.14e-07 | 29 |
telencephalon | 3.14e-07 | 29 |