FFCP PHASE1:Mm9::chr1:75546156..75546201,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20536 | |EntrezGene=20536 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z5A2 | |UniProt=D3Z5A2 | ||
|association_with_transcript=0bp_to_ENSMUST00000154101_5end | |association_with_transcript=0bp_to_ENSMUST00000154101_5end | ||
|cluster_id=chr1:75546156..75546201,+ | |||
|description=CAGE_peak_5_at_Slc4a3_5end | |description=CAGE_peak_5_at_Slc4a3_5end | ||
|id=chr1:75546156..75546201,+ | |id=chr1:75546156..75546201,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!7.95e-18!18;UBERON:0000948!7.95e-18!18;UBERON:0005498!7.95e-18!18;UBERON:0004140!7.95e-18!18;UBERON:0009881!7.95e-18!18;UBERON:0004141!7.95e-18!18;UBERON:0003084!7.95e-18!18;UBERON:0007005!7.95e-18!18;UBERON:0004139!7.95e-18!18;UBERON:0004291!7.95e-18!18;UBERON:0004535!4.47e-13!23;UBERON:0001009!4.47e-13!23;UBERON:0002369!1.48e-12!7;UBERON:0006858!1.48e-12!7;UBERON:0004872!3.47e-09!33;UBERON:0002342!2.30e-08!10;UBERON:0005062!2.30e-08!10 | |ontology_enrichment_uberon=UBERON:0007100!7.95e-18!18;UBERON:0000948!7.95e-18!18;UBERON:0005498!7.95e-18!18;UBERON:0004140!7.95e-18!18;UBERON:0009881!7.95e-18!18;UBERON:0004141!7.95e-18!18;UBERON:0003084!7.95e-18!18;UBERON:0007005!7.95e-18!18;UBERON:0004139!7.95e-18!18;UBERON:0004291!7.95e-18!18;UBERON:0004535!4.47e-13!23;UBERON:0001009!4.47e-13!23;UBERON:0002369!1.48e-12!7;UBERON:0006858!1.48e-12!7;UBERON:0004872!3.47e-09!33;UBERON:0002342!2.30e-08!10;UBERON:0005062!2.30e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.67e-30,18;UBERON:0000948,3.67e-30,18;UBERON:0005498,3.67e-30,18;UBERON:0004140,3.67e-30,18;UBERON:0009881,3.67e-30,18;UBERON:0004141,3.67e-30,18;UBERON:0003084,3.67e-30,18;UBERON:0007005,3.67e-30,18;UBERON:0004139,3.67e-30,18;UBERON:0004291,3.67e-30,18;UBERON:0002369,2.63e-27,7;UBERON:0006858,2.63e-27,7;UBERON:0004535,2.35e-23,23;UBERON:0001009,2.35e-23,23;UBERON:0004872,6.55e-16,33;UBERON:0010314,1.18e-13,92;UBERON:0003064,1.60e-13,14;UBERON:0003103,6.49e-12,43;UBERON:0003914,8.66e-11,47;UBERON:0000926,5.14e-10,120;UBERON:0004120,5.14e-10,120;UBERON:0006603,5.14e-10,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0,2.3750742250372,0.346970653532272,1.21786191324856,1.38369298353635,2.86373017049983,1.88141931417128,3.14166478324189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0.420883711772948,0,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.36012412292203,0,0.393528463494808,0.617068451549513,2.09280550275367,2.68273401399619,7.12268588439734,8.06343264576054,13.2975645904067,21.3210969105601,34.6493970198038,28.3219648725455,37.5777972529041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0.234690248288502,0.335012514883631,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377210159511796,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618105171716683,0,0.252697211763798,0,0,0.187283014939765,0.128050304809739,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0.382576664137687,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0,2.3750742250372,0.346970653532272,1.21786191324856,1.38369298353635,2.86373017049983,1.88141931417128,3.14166478324189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0.420883711772948,0,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.36012412292203,0,0.393528463494808,0.617068451549513,2.09280550275367,2.68273401399619,7.12268588439734,8.06343264576054,13.2975645904067,21.3210969105601,34.6493970198038,28.3219648725455,37.5777972529041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0.234690248288502,0.335012514883631,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377210159511796,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618105171716683,0,0.252697211763798,0,0,0.187283014939765,0.128050304809739,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0.561142271657738,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0.382576664137687,0,0 | ||
|short_description=p5@Slc4a3 | |short_description=p5@Slc4a3 | ||
}} | }} |
Latest revision as of 15:37, 1 October 2015
Short description: | p5@Slc4a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Slc4a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 0bp_to_ENSMUST00000154101_5end |
EntrezGene: | Slc4a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.67e-30 | 18 |
heart | 3.67e-30 | 18 |
primitive heart tube | 3.67e-30 | 18 |
primary heart field | 3.67e-30 | 18 |
anterior lateral plate mesoderm | 3.67e-30 | 18 |
heart tube | 3.67e-30 | 18 |
heart primordium | 3.67e-30 | 18 |
cardiac mesoderm | 3.67e-30 | 18 |
cardiogenic plate | 3.67e-30 | 18 |
heart rudiment | 3.67e-30 | 18 |
adrenal gland | 2.63e-27 | 7 |
adrenal/interrenal gland | 2.63e-27 | 7 |
cardiovascular system | 2.35e-23 | 23 |
circulatory system | 2.35e-23 | 23 |
splanchnic layer of lateral plate mesoderm | 6.55e-16 | 33 |
structure with developmental contribution from neural crest | 1.18e-13 | 92 |
intermediate mesoderm | 1.60e-13 | 14 |
compound organ | 6.49e-12 | 43 |
epithelial tube | 8.66e-11 | 47 |
mesoderm | 5.14e-10 | 120 |
mesoderm-derived structure | 5.14e-10 | 120 |
presumptive mesoderm | 5.14e-10 | 120 |