FFCP PHASE1:Mm9::chr9:57529711..57529721,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1652 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:57529711..57529721,- | |||
|description=CAGE_peak_at_chr9:57529711..57529721,- | |description=CAGE_peak_at_chr9:57529711..57529721,- | ||
|id=chr9:57529711..57529721,- | |id=chr9:57529711..57529721,- | ||
|ontology_enrichment_celltype=CL:0000181!3.54e-21!5;CL:0000417!3.54e-21!5;CL:0000668!3.54e-21!5;CL:0000412!3.54e-21!5;CL:0000182!3.54e-21!5;CL:0000414!9.01e-10!11 | |ontology_enrichment_celltype=CL:0000181!3.54e-21!5;CL:0000417!3.54e-21!5;CL:0000668!3.54e-21!5;CL:0000412!3.54e-21!5;CL:0000182!3.54e-21!5;CL:0000414!9.01e-10!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.65e-29,5;CL:0000223,1.85e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.74e-28!22;UBERON:0007499!8.74e-28!22;UBERON:0006925!8.74e-28!22;UBERON:0009497!8.74e-28!22;UBERON:0000015!8.74e-28!22;UBERON:0002423!8.74e-28!22;UBERON:0006235!8.74e-28!22;UBERON:0008835!8.74e-28!22;UBERON:0003894!8.74e-28!22;UBERON:0004161!8.74e-28!22;UBERON:0008836!8.74e-28!22;UBERON:0009854!1.55e-26!23;UBERON:0009856!1.55e-26!23;UBERON:0002365!2.45e-24!25;UBERON:0002330!2.45e-24!25;UBERON:0003914!1.85e-12!47;UBERON:0005256!1.85e-12!47;UBERON:0005172!6.63e-12!49;UBERON:0005173!6.63e-12!49;UBERON:0002417!6.63e-12!49;UBERON:0000916!6.63e-12!49;UBERON:0005057!2.15e-11!51;UBERON:0003929!1.75e-10!55;UBERON:0002405!9.00e-10!70;UBERON:0002368!1.63e-09!60;UBERON:0002530!1.08e-08!65;UBERON:0000490!1.53e-08!66;UBERON:0009569!1.53e-08!66;UBERON:0005911!4.05e-08!69;UBERON:0000949!9.91e-08!72;UBERON:0000466!6.15e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.94e-19,22;UBERON:0007499,1.94e-19,22;UBERON:0006925,1.94e-19,22;UBERON:0009497,1.94e-19,22;UBERON:0000015,1.94e-19,22;UBERON:0002423,1.94e-19,22;UBERON:0006235,1.94e-19,22;UBERON:0008835,1.94e-19,22;UBERON:0003894,1.94e-19,22;UBERON:0004161,1.94e-19,22;UBERON:0008836,1.94e-19,22;UBERON:0009854,1.38e-18,23;UBERON:0009856,1.38e-18,23;UBERON:0002365,4.38e-17,25;UBERON:0002330,4.38e-17,25;UBERON:0005256,2.24e-09,45;UBERON:0003914,5.80e-09,47;UBERON:0005172,1.39e-08,49;UBERON:0005173,1.39e-08,49;UBERON:0002417,1.39e-08,49;UBERON:0000916,1.39e-08,49;UBERON:0003929,1.32e-07,55;UBERON:0002368,6.10e-07,60;UBERON:0003104,8.05e-07,61;UBERON:0009142,8.05e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.439770669662,5.39703191637817,1.29955283489534,1.79210754838934,1.26399978118577,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77871576252289,0,0,0,0,0,0,0,0.162135226775035,0,0,0.744281895337007,0,1.76805214562978,0.896987067609561,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.439770669662,5.39703191637817,1.29955283489534,1.79210754838934,1.26399978118577,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77871576252289,0,0,0,0,0,0,0,0.162135226775035,0,0,0.744281895337007,0,1.76805214562978,0.896987067609561,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:57529711..57529721,- | |short_description=p@chr9:57529711..57529721,- | ||
}} | }} |
Latest revision as of 09:13, 5 August 2015
Short description: | p@chr9:57529711..57529721, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:57529711..57529721, - |
Coexpression cluster: | MCL_coexpression_mm9:1652 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.65e-29 | 5 |
endodermal cell | 1.85e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 1.94e-19 | 22 |
epithelial sac | 1.94e-19 | 22 |
digestive gland | 1.94e-19 | 22 |
epithelium of foregut-midgut junction | 1.94e-19 | 22 |
anatomical boundary | 1.94e-19 | 22 |
hepatobiliary system | 1.94e-19 | 22 |
foregut-midgut junction | 1.94e-19 | 22 |
hepatic diverticulum | 1.94e-19 | 22 |
liver primordium | 1.94e-19 | 22 |
septum transversum | 1.94e-19 | 22 |
liver bud | 1.94e-19 | 22 |
digestive tract diverticulum | 1.38e-18 | 23 |
sac | 1.38e-18 | 23 |
exocrine gland | 4.38e-17 | 25 |
exocrine system | 4.38e-17 | 25 |
trunk mesenchyme | 2.24e-09 | 45 |
epithelial tube | 5.80e-09 | 47 |
abdomen element | 1.39e-08 | 49 |
abdominal segment element | 1.39e-08 | 49 |
abdominal segment of trunk | 1.39e-08 | 49 |
abdomen | 1.39e-08 | 49 |
gut epithelium | 1.32e-07 | 55 |
endocrine gland | 6.10e-07 | 60 |
mesenchyme | 8.05e-07 | 61 |
entire embryonic mesenchyme | 8.05e-07 | 61 |