FFCP PHASE1:Mm9::chrX:71489367..71489376,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:71489367..71489376,- | |||
|description=CAGE_peak_at_chrX:71489367..71489376,- | |description=CAGE_peak_at_chrX:71489367..71489376,- | ||
|id=chrX:71489367..71489376,- | |id=chrX:71489367..71489376,- | ||
|ontology_enrichment_celltype=CL:0000084!1.65e-07!11;CL:0000827!1.65e-07!11;CL:0000325!4.11e-07!2;CL:0000217!4.11e-07!2;CL:0000328!4.11e-07!2;CL:0002573!4.11e-07!2;CL:0002376!4.11e-07!2;CL:0000218!4.11e-07!2;CL:0000692!4.11e-07!2;CL:0002377!4.11e-07!2;CL:0002375!4.11e-07!2;CL:0000624!6.73e-07!8;CL:0000838!7.31e-07!12 | |ontology_enrichment_celltype=CL:0000084!1.65e-07!11;CL:0000827!1.65e-07!11;CL:0000325!4.11e-07!2;CL:0000217!4.11e-07!2;CL:0000328!4.11e-07!2;CL:0002573!4.11e-07!2;CL:0002376!4.11e-07!2;CL:0000218!4.11e-07!2;CL:0000692!4.11e-07!2;CL:0002377!4.11e-07!2;CL:0002375!4.11e-07!2;CL:0000624!6.73e-07!8;CL:0000838!7.31e-07!12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000355,6.62e-14,9 | |||
|ontology_enrichment_disease=DOID:0060100!3.63e-12!3;DOID:4045!3.63e-12!3 | |ontology_enrichment_disease=DOID:0060100!3.63e-12!3;DOID:4045!3.63e-12!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.15e-39,3;DOID:4045,4.15e-39,3;DOID:0050686,3.10e-20,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,6.62e-14,9;UBERON:0002036,6.62e-14,9;UBERON:0002385,6.62e-14,9;UBERON:0000486,6.62e-14,9;UBERON:0007503,6.62e-14,9;UBERON:0001015,6.62e-14,9;UBERON:0002329,6.62e-14,9;UBERON:0003082,6.62e-14,9;UBERON:0003059,6.62e-14,9;UBERON:0007282,6.62e-14,9;UBERON:0004290,6.62e-14,9;UBERON:0009618,6.62e-14,9;UBERON:0000383,1.24e-12,10;UBERON:0007524,1.36e-11,11;UBERON:0003077,1.36e-11,11;UBERON:0007285,1.36e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.140788722151667,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,0.7813353445238,3.14114246384279,18.2351761289614,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.559805809294632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.140788722151667,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,0.7813353445238,3.14114246384279,18.2351761289614,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.559805809294632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chrX:71489367..71489376,- | |short_description=p@chrX:71489367..71489376,- | ||
}} | }} | ||
Latest revision as of 10:27, 6 August 2015
| Short description: | p@chrX:71489367..71489376, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chrX:71489367..71489376, - |
| Coexpression cluster: | MCL_coexpression_mm9:6 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| multi-potent skeletal muscle stem cell | 6.62e-14 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| skeletal muscle tissue | 6.62e-14 | 9 |
| striated muscle tissue | 6.62e-14 | 9 |
| muscle tissue | 6.62e-14 | 9 |
| multilaminar epithelium | 6.62e-14 | 9 |
| epithelial vesicle | 6.62e-14 | 9 |
| musculature | 6.62e-14 | 9 |
| somite | 6.62e-14 | 9 |
| myotome | 6.62e-14 | 9 |
| presomitic mesoderm | 6.62e-14 | 9 |
| presumptive segmental plate | 6.62e-14 | 9 |
| dermomyotome | 6.62e-14 | 9 |
| trunk paraxial mesoderm | 6.62e-14 | 9 |
| musculature of body | 1.24e-12 | 10 |
| dense mesenchyme tissue | 1.36e-11 | 11 |
| paraxial mesoderm | 1.36e-11 | 11 |
| presumptive paraxial mesoderm | 1.36e-11 | 11 |
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system cancer | 4.15e-39 | 3 |
| muscle cancer | 4.15e-39 | 3 |
| organ system cancer | 3.10e-20 | 6 |