Personal tools

FFCP PHASE1:Mm9::chr4:127199683..127199694,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=196
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr4:127199683..127199694,+
|description=CAGE_peak_at_chr4:127199683..127199694,+
|description=CAGE_peak_at_chr4:127199683..127199694,+
|id=chr4:127199683..127199694,+
|id=chr4:127199683..127199694,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000057,2.52e-09,1;CL:0000632,2.52e-09,1;CL:0000182,2.60e-07,5
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!7.38e-17!22;UBERON:0007499!7.38e-17!22;UBERON:0006925!7.38e-17!22;UBERON:0009497!7.38e-17!22;UBERON:0000015!7.38e-17!22;UBERON:0002423!7.38e-17!22;UBERON:0006235!7.38e-17!22;UBERON:0008835!7.38e-17!22;UBERON:0003894!7.38e-17!22;UBERON:0004161!7.38e-17!22;UBERON:0008836!7.38e-17!22;UBERON:0009854!4.52e-16!23;UBERON:0009856!4.52e-16!23;UBERON:0003914!4.04e-15!47;UBERON:0002365!1.10e-14!25;UBERON:0002330!1.10e-14!25;UBERON:0005057!9.19e-10!51;UBERON:0003929!6.29e-09!55;UBERON:0002368!4.86e-08!60;UBERON:0002530!2.75e-07!65;UBERON:0005256!3.29e-07!47;UBERON:0000490!3.76e-07!66;UBERON:0005172!7.33e-07!49;UBERON:0005173!7.33e-07!49;UBERON:0002417!7.33e-07!49;UBERON:0000916!7.33e-07!49;UBERON:0005911!9.16e-07!69
|ontology_enrichment_uberon=UBERON:0002107!7.38e-17!22;UBERON:0007499!7.38e-17!22;UBERON:0006925!7.38e-17!22;UBERON:0009497!7.38e-17!22;UBERON:0000015!7.38e-17!22;UBERON:0002423!7.38e-17!22;UBERON:0006235!7.38e-17!22;UBERON:0008835!7.38e-17!22;UBERON:0003894!7.38e-17!22;UBERON:0004161!7.38e-17!22;UBERON:0008836!7.38e-17!22;UBERON:0009854!4.52e-16!23;UBERON:0009856!4.52e-16!23;UBERON:0003914!4.04e-15!47;UBERON:0002365!1.10e-14!25;UBERON:0002330!1.10e-14!25;UBERON:0005057!9.19e-10!51;UBERON:0003929!6.29e-09!55;UBERON:0002368!4.86e-08!60;UBERON:0002530!2.75e-07!65;UBERON:0005256!3.29e-07!47;UBERON:0000490!3.76e-07!66;UBERON:0005172!7.33e-07!49;UBERON:0005173!7.33e-07!49;UBERON:0002417!7.33e-07!49;UBERON:0000916!7.33e-07!49;UBERON:0005911!9.16e-07!69
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.65e-29,22;UBERON:0007499,6.65e-29,22;UBERON:0006925,6.65e-29,22;UBERON:0009497,6.65e-29,22;UBERON:0000015,6.65e-29,22;UBERON:0002423,6.65e-29,22;UBERON:0006235,6.65e-29,22;UBERON:0008835,6.65e-29,22;UBERON:0003894,6.65e-29,22;UBERON:0004161,6.65e-29,22;UBERON:0008836,6.65e-29,22;UBERON:0009854,1.25e-27,23;UBERON:0009856,1.25e-27,23;UBERON:0002365,2.20e-25,25;UBERON:0002330,2.20e-25,25;UBERON:0005256,7.25e-14,45;UBERON:0003914,2.99e-13,47;UBERON:0005172,1.10e-12,49;UBERON:0005173,1.10e-12,49;UBERON:0002417,1.10e-12,49;UBERON:0000916,1.10e-12,49;UBERON:0003929,3.13e-11,55;UBERON:0002368,3.07e-10,60;UBERON:0003104,4.63e-10,61;UBERON:0009142,4.63e-10,61;UBERON:0002530,2.13e-09,65;UBERON:0000490,3.02e-09,66;UBERON:0009569,3.02e-09,66;UBERON:0005911,8.19e-09,69;UBERON:0000949,2.05e-08,72;UBERON:0005177,1.33e-07,79;UBERON:0001041,1.69e-07,80
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16254326188832,0,0,2.59910566979068,6.2723764193627,2.24711072210803,0,0,0,0,0,0,0,0,0,0,5.36664234679582,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.536825675041487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.6410417773619,0,0,0,0,0,0,0,0,0,0,2.23284568601102,3.43241440426017,6.56705082662491,7.3552939543984,2.8946611281802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16254326188832,0,0,2.59910566979068,6.2723764193627,2.24711072210803,0,0,0,0,0,0,0,0,0,0,5.36664234679582,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.536825675041487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.6410417773619,0,0,0,0,0,0,0,0,0,0,2.23284568601102,3.43241440426017,6.56705082662491,7.3552939543984,2.8946611281802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0
|short_description=p@chr4:127199683..127199694,+
|short_description=p@chr4:127199683..127199694,+
}}
}}

Latest revision as of 18:48, 4 August 2015

Short description:p@chr4:127199683..127199694, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr4:127199683..127199694, +
Coexpression cluster:MCL_coexpression_mm9:196
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
5
10
15
20
25




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data