FFCP PHASE1:Hg19::chr13:48464500..48464519,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:48464500..48464519,+ | |||
|coexpression_cluster_id=C121 | |||
|description=CAGE_peak_at_chr13:48464500..48464519,+ | |description=CAGE_peak_at_chr13:48464500..48464519,+ | ||
|id=chr13:48464500..48464519,+ | |id=chr13:48464500..48464519,+ | ||
|ontology_enrichment_celltype=CL:0002579!6.40e-07!3 | |ontology_enrichment_celltype=CL:0002579!6.40e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002127;7.47e-30;1!CL:0000911;7.47e-30;1!CL:0000814;7.47e-30;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,7.48e-30,1;CL:0000914,7.48e-30,1;CL:0000911,7.48e-30,1;CL:0000814,7.48e-30,1;CL:0002042,7.48e-30,1;CL:0002039,7.48e-30,1;CL:0002040,7.48e-30,1;CL:0002041,7.48e-30,1;CL:0000893,1.15e-15,2;CL:0002489,1.15e-15,2;CL:0000809,1.15e-15,2;CL:0000808,1.15e-15,2;CL:0000894,1.15e-15,2;CL:0000806,1.15e-15,2;CL:0000807,1.15e-15,2;CL:0000805,1.15e-15,2;CL:0002425,1.15e-15,2 | |||
|ontology_enrichment_development_v019=CL:0002425;1.15e-15;2!UBERON:0007123;5.86e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;1.91e-15;2!DOID:4236;1.91e-15;2!DOID:4362;5.86e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:154,1.33e-15,2;DOID:4236,1.33e-15,2;DOID:4362,6.04e-07,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009722,2.68e-11,11;UBERON:0007690,2.68e-11,11;UBERON:0002370,1.70e-08,4;UBERON:0005058,1.70e-08,4;UBERON:0009113,1.70e-08,4;UBERON:0003295,1.70e-08,4;UBERON:0005562,1.70e-08,4;UBERON:0008814,2.86e-07,18;UBERON:0002046,6.77e-07,5;UBERON:0004117,6.77e-07,5;UBERON:0007689,6.77e-07,5;UBERON:0007123,6.77e-07,5;UBERON:0003091,6.77e-07,5 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83593247695339,0,0,0,0,0,0,0,0,0,0.328875809207352,0,0.289803085735052,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.573673241497627,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0.427114777637135,0,0,0,0.257640540045629,0.18611685633159,0.506328996723799,0.194874010322397,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0.171567810298526,0,0,0.100528972411631,0.277765335475589,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0,0,0,6.164682919644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0,0.256278298511402,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.267096106940212,0,0.192190067365106,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0,0,0.423347165447766,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,1.00177834520615,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,1.0893846351899,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,1.72989514525104,0.626531697032732,0,0,0,0,0.391329237864179,0,0,0,0,0,0.450970258243478,0,0,0.330991955875499,0.627865836814451,0,0.284609546029793,0.277349346026277,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0.411125773940253,0,0,0,0,0,0,0,0,0,0.432164393964449,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0.105600336519406,0,0.767660789277781,0,0,0,0,0,0,0,1.06720276974141,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606596470166591,0,0,0,0,0,0.233713309847224,0,0,0,0,0.457680136793847,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565909307848,0,0,0,0.426766918776564,0.516644938982447,0,0,0.139879507719444,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0.381382095467167,0,0.795664888465099,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83593247695339,0,0,0,0,0,0,0,0,0,0.328875809207352,0,0.289803085735052,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.573673241497627,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0.427114777637135,0,0,0,0.257640540045629,0.18611685633159,0.506328996723799,0.194874010322397,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0.171567810298526,0,0,0.100528972411631,0.277765335475589,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0,0,0,6.164682919644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0,0.256278298511402,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.267096106940212,0,0.192190067365106,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0,0,0.423347165447766,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,1.00177834520615,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,1.0893846351899,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,1.72989514525104,0.626531697032732,0,0,0,0,0.391329237864179,0,0,0,0,0,0.450970258243478,0,0,0.330991955875499,0.627865836814451,0,0.284609546029793,0.277349346026277,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0.411125773940253,0,0,0,0,0,0,0,0,0,0.432164393964449,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0.105600336519406,0,0.767660789277781,0,0,0,0,0,0,0,1.06720276974141,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606596470166591,0,0,0,0,0,0.233713309847224,0,0,0,0,0.457680136793847,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565909307848,0,0,0,0.426766918776564,0.516644938982447,0,0,0.139879507719444,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0.381382095467167,0,0.795664888465099,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:48464500..48464519,+ | |short_description=p@chr13:48464500..48464519,+ | ||
}} | }} |
Latest revision as of 16:27, 24 July 2015
Short description: | p@chr13:48464500..48464519, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:48464500..48464519, + |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 7.48e-30 | 1 |
immature NK T cell | 7.48e-30 | 1 |
effector T cell | 7.48e-30 | 1 |
mature NK T cell | 7.48e-30 | 1 |
immature NK T cell stage IV | 7.48e-30 | 1 |
immature NK T cell stage I | 7.48e-30 | 1 |
immature NK T cell stage II | 7.48e-30 | 1 |
immature NK T cell stage III | 7.48e-30 | 1 |
thymocyte | 1.15e-15 | 2 |
double negative thymocyte | 1.15e-15 | 2 |
double-positive, alpha-beta thymocyte | 1.15e-15 | 2 |
DN4 thymocyte | 1.15e-15 | 2 |
DN1 thymic pro-T cell | 1.15e-15 | 2 |
DN2 thymocyte | 1.15e-15 | 2 |
DN3 thymocyte | 1.15e-15 | 2 |
immature single positive thymocyte | 1.15e-15 | 2 |
early T lineage precursor | 1.15e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
entire pharyngeal arch endoderm | 2.68e-11 | 11 |
early pharyngeal endoderm | 2.68e-11 | 11 |
thymus | 1.70e-08 | 4 |
hemolymphoid system gland | 1.70e-08 | 4 |
thymic region | 1.70e-08 | 4 |
pharyngeal gland | 1.70e-08 | 4 |
thymus primordium | 1.70e-08 | 4 |
pharyngeal arch system | 2.86e-07 | 18 |
thyroid gland | 6.77e-07 | 5 |
pharyngeal pouch | 6.77e-07 | 5 |
thyroid diverticulum | 6.77e-07 | 5 |
pharyngeal pouch 2 | 6.77e-07 | 5 |
thyroid primordium | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.33e-15 | 2 |
carcinosarcoma | 1.33e-15 | 2 |
cervical cancer | 6.04e-07 | 5 |