FFCP PHASE1:Hg19::chr13:59545633..59545635,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:59545633..59545635,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr13:59545633..59545635,- | |description=CAGE_peak_at_chr13:59545633..59545635,- | ||
|id=chr13:59545633..59545635,- | |id=chr13:59545633..59545635,- | ||
|ontology_enrichment_celltype=CL:0000764!2.65e-17!2;CL:0000765!2.65e-17!2;CL:0000050!2.65e-17!2;CL:0000038!2.65e-17!2;CL:0000558!2.65e-17!2;CL:0000547!2.65e-17!2;CL:0000549!2.65e-17!2;CL:0000550!2.65e-17!2;CL:0000552!2.65e-17!2 | |ontology_enrichment_celltype=CL:0000764!2.65e-17!2;CL:0000765!2.65e-17!2;CL:0000050!2.65e-17!2;CL:0000038!2.65e-17!2;CL:0000558!2.65e-17!2;CL:0000547!2.65e-17!2;CL:0000549!2.65e-17!2;CL:0000550!2.65e-17!2;CL:0000552!2.65e-17!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;4.09e-11;2!CL:0000558;4.09e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.70e-11,2;CL:0000765,3.70e-11,2;CL:0000050,3.70e-11,2;CL:0000038,3.70e-11,2;CL:0000558,3.70e-11,2;CL:0000547,3.70e-11,2;CL:0000549,3.70e-11,2;CL:0000550,3.70e-11,2;CL:0000552,3.70e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.59e-43!15;UBERON:0000179!2.59e-43!15;UBERON:0000463!2.59e-43!15;UBERON:0007023!3.98e-15!115;UBERON:0002106!2.31e-11!3;UBERON:0004854!2.31e-11!3;UBERON:0009034!2.31e-11!3;UBERON:0002095!2.31e-11!3;UBERON:0004782!2.31e-11!3;UBERON:0003281!2.31e-11!3;UBERON:0009664!2.31e-11!3;UBERON:0002296!2.31e-11!3;UBERON:0005602!2.31e-11!3;UBERON:0001179!2.31e-11!3;UBERON:0006293!2.31e-11!3;UBERON:0007029!1.99e-09!1;UBERON:0002363!5.28e-09!1;UBERON:0007647!5.28e-09!1;UBERON:0010115!5.28e-09!1;UBERON:0002390!9.34e-08!102;UBERON:0003061!9.34e-08!102;UBERON:0001009!6.42e-07!113;UBERON:0002193!6.60e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.29e-106;15!UBERON:0000179;9.29e-106;15!UBERON:0000463;9.29e-106;15!UBERON:0002390;2.71e-45;32!UBERON:0002193;3.65e-25;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.05e-105,15;UBERON:0000179,1.05e-105,15;UBERON:0000463,1.05e-105,15;UBERON:0007023,5.86e-17,114;UBERON:0002390,7.77e-16,98;UBERON:0003061,7.77e-16,98;UBERON:0004535,2.39e-14,109;UBERON:0002193,2.39e-14,108;UBERON:0001009,5.94e-14,112;UBERON:0003081,1.97e-07,203 | |||
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|short_description=p@chr13:59545633..59545635,- | |short_description=p@chr13:59545633..59545635,- | ||
}} | }} |
Latest revision as of 16:53, 24 July 2015
Short description: | p@chr13:59545633..59545635, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:59545633..59545635, - |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr13:59545633..59545635- |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.70e-11 | 2 |
erythroblast | 3.70e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 3.70e-11 | 2 |
erythroid progenitor cell | 3.70e-11 | 2 |
reticulocyte | 3.70e-11 | 2 |
proerythroblast | 3.70e-11 | 2 |
basophilic erythroblast | 3.70e-11 | 2 |
polychromatophilic erythroblast | 3.70e-11 | 2 |
orthochromatic erythroblast | 3.70e-11 | 2 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
---|---|---|
blood | 1.05e-105 | 15 |
haemolymphatic fluid | 1.05e-105 | 15 |
organism substance | 1.05e-105 | 15 |
adult organism | 5.86e-17 | 114 |
hematopoietic system | 7.77e-16 | 98 |
blood island | 7.77e-16 | 98 |
cardiovascular system | 2.39e-14 | 109 |
hemolymphoid system | 2.39e-14 | 108 |
circulatory system | 5.94e-14 | 112 |
lateral plate mesoderm | 1.97e-07 | 203 |
Showing 1 to 10 of 10 entries