FFCP PHASE1:Mm9::chr5:15440503..15440514,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12293 | |EntrezGene=12293 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=O08532,E9Q1X8,Q14BH8,Q8C6Y3 | |UniProt=O08532,E9Q1X8,Q14BH8,Q8C6Y3 | ||
|association_with_transcript=0bp_to_ENSMUST00000039370,ENSMUST00000078272,ENSMUST00000101581,ENSMUST00000167946,NM_001110843,NM_001110844,NM_001110845,NM_001110846,NM_009784,uc008wmw.2,uc008wmx.2,uc008wmy.2,uc008wmz.2,uc008wna.2,uc008wnb.2_5end | |association_with_transcript=0bp_to_ENSMUST00000039370,ENSMUST00000078272,ENSMUST00000101581,ENSMUST00000167946,NM_001110843,NM_001110844,NM_001110845,NM_001110846,NM_009784,uc008wmw.2,uc008wmx.2,uc008wmy.2,uc008wmz.2,uc008wna.2,uc008wnb.2_5end | ||
|cluster_id=chr5:15440503..15440514,+ | |||
|description=CAGE_peak_5_at_Cacna2d1_5end | |description=CAGE_peak_5_at_Cacna2d1_5end | ||
|id=chr5:15440503..15440514,+ | |id=chr5:15440503..15440514,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.02e-08!333;UBERON:0002346!3.92e-08!71;UBERON:0003075!3.92e-08!71;UBERON:0007284!3.92e-08!71;UBERON:0004111!7.75e-08!122;UBERON:0000033!1.19e-07!63;UBERON:0000025!4.98e-07!114;UBERON:0004121!6.30e-07!102;UBERON:0000924!6.30e-07!102;UBERON:0006601!6.30e-07!102 | |ontology_enrichment_uberon=UBERON:0000468!3.02e-08!333;UBERON:0002346!3.92e-08!71;UBERON:0003075!3.92e-08!71;UBERON:0007284!3.92e-08!71;UBERON:0004111!7.75e-08!122;UBERON:0000033!1.19e-07!63;UBERON:0000025!4.98e-07!114;UBERON:0004121!6.30e-07!102;UBERON:0000924!6.30e-07!102;UBERON:0006601!6.30e-07!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.29e-09,92;UBERON:0007100,6.37e-07,18;UBERON:0000948,6.37e-07,18;UBERON:0005498,6.37e-07,18;UBERON:0004140,6.37e-07,18;UBERON:0009881,6.37e-07,18;UBERON:0004141,6.37e-07,18;UBERON:0003084,6.37e-07,18;UBERON:0007005,6.37e-07,18;UBERON:0004139,6.37e-07,18;UBERON:0004291,6.37e-07,18 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.11514624341466,1.28482726513177,0.782391344348039,0.872100625521786,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,1.80081605225163,2.57880095944881,1.54701627683233,0.606949382578793,1.05798195854407,0,1.35537812827653,0,0.449949858640699,0,0,0.299600110518405,0.768436610643109,1.24427534770173,0.810035629990144,1.05162480675691,0.856952953211411,0.883474163806454,0.61245399607477,0.0958454710182364,0.919218786610021,0,0.893811366596314,1.53606533256243,0.263772575460388,0.457438218012048,1.56274011167028,0.558365998002762,0.56276261003168,1.37518422999129,0.589257170947335,1.85083185038834,0.372798891650601,0.605809546665472,0.604572480854284,0.289864488701678,0,0,0,0,0,0.561777680527007,1.1930122580464,1.03914401841148,0,1.12674735821344,1.28326477414318,0,0,0.216491041011214,0,0,0.34255163915718,0.258937883647172,0.742210695324124,0.693941307064543,1.21786191324856,2.30615497256059,1.05505848386836,2.23418543557839,1.75933227861546,0.247194967734374,1.01219549843938,1.76922110389975,2.91180329905337,1.54589062922275,1.45462575940567,0,3.22058876712702,5.02672096352292,0.766371165625774,0,0,0,1.79748767285787,2.28750301409313,0.753926112677186,1.91206752211504,1.02286182932132,1.0389402227978,2.43361894601636,1.12023300235348,0.373220911830279,0.505445516867349,0.420883711772948,0.780722657776222,0.689706313300419,1.26043490863744,1.50704817835715,1.56483948048054,1.7935920839879,1.59292931751539,0.776110112217047,0.862271971731369,0.945530400839096,1.40760899331159,0.43839146485515,1.11218899690239,2.089512999133,1.4404749548556,0.59710280045548,0,0,0,1.24275463521301,0.703578179943289,0.720248245844059,1.42046841351126,0.393528463494808,2.1597395804233,1.39520366850245,1.3413670069981,2.91913355917924,3.12663714835613,3.77585167381919,2.1888578577381,1.31579988682799,1.3173006917463,2.14730270016595,1.68231958851302,2.05809224758569,0,0.793351699990633,0.426576501070468,2.09013004674395,0.644337306610467,0.80673409849337,0.667134131534611,0.380451252225118,0,0.329397909448022,0.251335208800269,0.397912944082302,0.779856348476481,0,0.648414149624083,0,0.569003702859245,1.14248512609729,0,0,0.775809948670503,1.68325967736765,0.948548056863859,0.147610147979602,0.470996183524124,0.246794327843601,0,0.333690211432188,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0.358794827043824,0,1.10851914099963,0.947457058852424,0.651859905768103,1.18821560042632,0.938760993154008,0.837531287209079,2.14239276797412,1.95133647857799,1.41871629695572,1.99318220683897,2.55127629851979,0.655453258862952,0.690739927463582,0.867894351489069,0,0,0,0,0.642202359951168,0.820481806145422,0.819674726883377,3.53459298086122,0.631016438832513,0.780877488593277,0.646270193198397,1.19484398976276,0.891194696329576,1.69845918473299,0.809621403349789,0.292255857911312,1.18586333383957,2.89189184779626,1.41940085208269,0.534196811001766,1.79175655288934,1.15479086080775,1.32745138339963,0.242780636154981,0.906970670894253,0,0.590603785761546,1.22974059177571,1.03371317267288,1.09060118843252,1.42598951353889,0.632073515871632,0,0,2.04263763452273,0.900305470156551,0.129358683782755,0.428674070063185,1.59606210278046,2.14042581122485,1.81003922662333,1.8267896946876,0.23467170806371,0,0.441056796109924,0.65954501176592,1.45317984026315,0.965006798850494,0.596861720015682,0.328281799490123,0.291480836629851,0.556275906031529,0,0.82554747185289,0,0.188368457004691,0,0,0,0,0,0,1.10717597753397,1.21991680276109,0.756037385752609,0.627264888043406,0.218362563746178,1.48350781023303,2.56225712748541,1.30877970992015,0.777689839750757,0.621339313086926,0,0.897099276263873,0.496375471371293,0.972255941720238,0.516639293910924,1.18269287843545,1.76035857968631,2.0832701575032,1.15345278868282,0.241584120826006,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.906921534460845,0.221985953374065,0.269141569828427,0.167884616364078,1.73870634628971,0.93841237725591,0.73260649706906,1.07184189539533,1.00314420807073,0,3.22227665555024,1.14579102687879,1.3748254587495,1.37016503954128,3.0215755895588,1.35004500046361,1.35096360967266,1.81256963593682,0.51776031175182,0.103787347584177,0.399024873401031,1.02440163452481,0.972426868273176,0.628839487883947,0.367687016900028,2.66696073361938,1.85431551515005,0.962757628775446,1.76888048234658,1.52087579934144,1.69763707247469,1.40462261204824,1.21647789569252,1.95280594449085,1.90517476513229,2.66533949673168,1.92909220463705,0.824171801606613,1.76638704161277,0.342869252385415,1.4198064492747,0.715308569841963,1.45346416632329,1.2234219453993,1.4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| |phase1_expression=1.44133962394315,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.11514624341466,1.28482726513177,0.782391344348039,0.872100625521786,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,1.80081605225163,2.57880095944881,1.54701627683233,0.606949382578793,1.05798195854407,0,1.35537812827653,0,0.449949858640699,0,0,0.299600110518405,0.768436610643109,1.24427534770173,0.810035629990144,1.05162480675691,0.856952953211411,0.883474163806454,0.61245399607477,0.0958454710182364,0.919218786610021,0,0.893811366596314,1.53606533256243,0.263772575460388,0.457438218012048,1.56274011167028,0.558365998002762,0.56276261003168,1.37518422999129,0.589257170947335,1.85083185038834,0.372798891650601,0.605809546665472,0.604572480854284,0.289864488701678,0,0,0,0,0,0.561777680527007,1.1930122580464,1.03914401841148,0,1.12674735821344,1.28326477414318,0,0,0.216491041011214,0,0,0.34255163915718,0.258937883647172,0.742210695324124,0.693941307064543,1.21786191324856,2.30615497256059,1.05505848386836,2.23418543557839,1.75933227861546,0.247194967734374,1.01219549843938,1.76922110389975,2.91180329905337,1.54589062922275,1.45462575940567,0,3.22058876712702,5.02672096352292,0.766371165625774,0,0,0,1.79748767285787,2.28750301409313,0.753926112677186,1.91206752211504,1.02286182932132,1.0389402227978,2.43361894601636,1.12023300235348,0.373220911830279,0.505445516867349,0.420883711772948,0.780722657776222,0.689706313300419,1.26043490863744,1.50704817835715,1.56483948048054,1.7935920839879,1.59292931751539,0.776110112217047,0.862271971731369,0.945530400839096,1.40760899331159,0.43839146485515,1.11218899690239,2.089512999133,1.4404749548556,0.59710280045548,0,0,0,1.24275463521301,0.703578179943289,0.720248245844059,1.42046841351126,0.393528463494808,2.1597395804233,1.39520366850245,1.3413670069981,2.91913355917924,3.12663714835613,3.77585167381919,2.1888578577381,1.31579988682799,1.3173006917463,2.14730270016595,1.68231958851302,2.05809224758569,0,0.793351699990633,0.426576501070468,2.09013004674395,0.644337306610467,0.80673409849337,0.667134131534611,0.380451252225118,0,0.329397909448022,0.251335208800269,0.397912944082302,0.779856348476481,0,0.648414149624083,0,0.569003702859245,1.14248512609729,0,0,0.775809948670503,1.68325967736765,0.948548056863859,0.147610147979602,0.470996183524124,0.246794327843601,0,0.333690211432188,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0.358794827043824,0,1.10851914099963,0.947457058852424,0.651859905768103,1.18821560042632,0.938760993154008,0.837531287209079,2.14239276797412,1.95133647857799,1.41871629695572,1.99318220683897,2.55127629851979,0.655453258862952,0.690739927463582,0.867894351489069,0,0,0,0,0.642202359951168,0.820481806145422,0.819674726883377,3.53459298086122,0.631016438832513,0.780877488593277,0.646270193198397,1.19484398976276,0.891194696329576,1.69845918473299,0.809621403349789,0.292255857911312,1.18586333383957,2.89189184779626,1.41940085208269,0.534196811001766,1.79175655288934,1.15479086080775,1.32745138339963,0.242780636154981,0.906970670894253,0,0.590603785761546,1.22974059177571,1.03371317267288,1.09060118843252,1.42598951353889,0.632073515871632,0,0,2.04263763452273,0.900305470156551,0.129358683782755,0.428674070063185,1.59606210278046,2.14042581122485,1.81003922662333,1.8267896946876,0.23467170806371,0,0.441056796109924,0.65954501176592,1.45317984026315,0.965006798850494,0.596861720015682,0.328281799490123,0.291480836629851,0.556275906031529,0,0.82554747185289,0,0.188368457004691,0,0,0,0,0,0,1.10717597753397,1.21991680276109,0.756037385752609,0.627264888043406,0.218362563746178,1.48350781023303,2.56225712748541,1.30877970992015,0.777689839750757,0.621339313086926,0,0.897099276263873,0.496375471371293,0.972255941720238,0.516639293910924,1.18269287843545,1.76035857968631,2.0832701575032,1.15345278868282,0.241584120826006,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.906921534460845,0.221985953374065,0.269141569828427,0.167884616364078,1.73870634628971,0.93841237725591,0.73260649706906,1.07184189539533,1.00314420807073,0,3.22227665555024,1.14579102687879,1.3748254587495,1.37016503954128,3.0215755895588,1.35004500046361,1.35096360967266,1.81256963593682,0.51776031175182,0.103787347584177,0.399024873401031,1.02440163452481,0.972426868273176,0.628839487883947,0.367687016900028,2.66696073361938,1.85431551515005,0.962757628775446,1.76888048234658,1.52087579934144,1.69763707247469,1.40462261204824,1.21647789569252,1.95280594449085,1.90517476513229,2.66533949673168,1.92909220463705,0.824171801606613,1.76638704161277,0.342869252385415,1.4198064492747,0.715308569841963,1.45346416632329,1.2234219453993,1.4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| ||
|short_description=p5@Cacna2d1 | |short_description=p5@Cacna2d1 | ||
}} | }} |
Latest revision as of 19:19, 25 September 2015
Short description: | p5@Cacna2d1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cacna2d1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000039370, ENSMUST00000078272, ENSMUST00000101581, ENSMUST00000167946, NM_001110843, NM_001110844, NM_001110845, NM_001110846, NM_009784, uc008wmw.2, uc008wmx.2, uc008wmy.2, uc008wmz.2, uc008wna.2, uc008wnb.2_5end |
EntrezGene: | Cacna2d1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 3.29e-09 | 92 |
primary circulatory organ | 6.37e-07 | 18 |
heart | 6.37e-07 | 18 |
primitive heart tube | 6.37e-07 | 18 |
primary heart field | 6.37e-07 | 18 |
anterior lateral plate mesoderm | 6.37e-07 | 18 |
heart tube | 6.37e-07 | 18 |
heart primordium | 6.37e-07 | 18 |
cardiac mesoderm | 6.37e-07 | 18 |
cardiogenic plate | 6.37e-07 | 18 |
heart rudiment | 6.37e-07 | 18 |