FFCP PHASE1:Hg19::chr10:24726425..24726450,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:24726425..24726450,+ | |||
|coexpression_cluster_id=C228 | |||
|description=CAGE_peak_at_chr10:24726425..24726450,+ | |description=CAGE_peak_at_chr10:24726425..24726450,+ | ||
|id=chr10:24726425..24726450,+ | |id=chr10:24726425..24726450,+ | ||
|ontology_enrichment_celltype=CL:0002166!2.86e-08!3 | |ontology_enrichment_celltype=CL:0002166!2.86e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.48e-40;4!CL:0002253;3.11e-21;2!CL:0002166;1.83e-14;3!CL:0002231;1.83e-14;3!CL:0002076;9.03e-10;42!CL:0002251;5.26e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.48e-40,4;CL:0002253,3.11e-21,2;CL:0002166,1.60e-14,3;CL:0002231,1.83e-14,3;CL:0002076,2.52e-09,42;CL:0002251,5.26e-09,20;CL:0000223,5.90e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001042!2.85e-13!10;UBERON:0009145!2.85e-13!10;UBERON:0006562!4.82e-12!11;UBERON:0003408!4.81e-09!10;UBERON:0001723!3.68e-08!3;UBERON:0001033!3.68e-08!3;UBERON:0010056!3.68e-08!3;UBERON:0000344!2.07e-07!12;UBERON:0004177!2.07e-07!7;UBERON:0000078!2.87e-07!18;UBERON:0007023!3.79e-07!115;UBERON:0007029!5.13e-07!1;UBERON:0006122!5.43e-07!1;UBERON:0000153!5.62e-07!129;UBERON:0007811!5.62e-07!129;UBERON:0001831!6.43e-07!1;UBERON:0001567!6.43e-07!1;UBERON:0008801!6.43e-07!1;UBERON:0001557!7.36e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.48e-40;4!UBERON:0001262;1.48e-40;4!UBERON:0004786;1.48e-40;4!UBERON:0004808;1.48e-40;4!UBERON:0001277;1.48e-40;4!UBERON:0007029;2.21e-40;1!UBERON:0000485;1.02e-23;7!UBERON:0003929;1.02e-23;7!UBERON:0003350;6.64e-21;8!UBERON:0001052;2.53e-11;4!UBERON:0000014;3.42e-11;4!UBERON:0001708;3.42e-11;4!UBERON:0008895;3.42e-11;4!UBERON:0000160;6.79e-10;17!UBERON:0004907;2.53e-09;5!UBERON:0011159;3.22e-09;5!UBERON:0000344;5.26e-09;20!UBERON:0005409;5.87e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.48e-40,4;UBERON:0001262,1.48e-40,4;UBERON:0004786,1.48e-40,4;UBERON:0004808,1.48e-40,4;UBERON:0001277,1.48e-40,4;UBERON:0007029,3.30e-40,1;UBERON:0003350,6.64e-21,8;UBERON:0000485,1.03e-18,9;UBERON:0001052,2.53e-11,4;UBERON:0001708,3.10e-11,4;UBERON:0008895,3.10e-11,4;UBERON:0000014,3.79e-11,4;UBERON:0000160,6.79e-10,17;UBERON:0001046,2.17e-09,19;UBERON:0004907,2.53e-09,5;UBERON:0011159,2.97e-09,5;UBERON:0000344,5.26e-09,20;UBERON:0010188,6.34e-08,6;UBERON:0002539,6.34e-08,6;UBERON:0008816,6.34e-08,6;UBERON:0003929,2.03e-07,54;UBERON:0005409,3.78e-07,25 | |||
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|short_description=p@chr10:24726425..24726450,+ | |short_description=p@chr10:24726425..24726450,+ | ||
}} | }} |
Latest revision as of 12:43, 23 July 2015
Short description: | p@chr10:24726425..24726450, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:24726425..24726450, + |
Coexpression cluster: | C228_colon_Intestinal_Prostate_hepatoblastoma_hepatocellular_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.48e-40 | 4 |
epithelial cell of large intestine | 3.11e-21 | 2 |
epithelial cell of Malassez | 1.60e-14 | 3 |
epithelial cell of prostate | 1.83e-14 | 3 |
endo-epithelial cell | 2.52e-09 | 42 |
epithelial cell of alimentary canal | 5.26e-09 | 20 |
endodermal cell | 5.90e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.48e-40 | 4 |
wall of intestine | 1.48e-40 | 4 |
gastrointestinal system mucosa | 1.48e-40 | 4 |
gastrointestinal system epithelium | 1.48e-40 | 4 |
intestinal epithelium | 1.48e-40 | 4 |
surface | 3.30e-40 | 1 |
epithelium of mucosa | 6.64e-21 | 8 |
simple columnar epithelium | 1.03e-18 | 9 |
rectum | 2.53e-11 | 4 |
jaw skeleton | 3.10e-11 | 4 |
splanchnocranium | 3.10e-11 | 4 |
zone of skin | 3.79e-11 | 4 |
intestine | 6.79e-10 | 17 |
hindgut | 2.17e-09 | 19 |
lower digestive tract | 2.53e-09 | 5 |
primary subdivision of cranial skeletal system | 2.97e-09 | 5 |
mucosa | 5.26e-09 | 20 |
protuberance | 6.34e-08 | 6 |
pharyngeal arch | 6.34e-08 | 6 |
embryonic head | 6.34e-08 | 6 |
gut epithelium | 2.03e-07 | 54 |
gastrointestinal system | 3.78e-07 | 25 |