FFCP PHASE1:Hg19::chr10:4713181..4713220,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:4713181..4713220,+ | |||
|description=CAGE_peak_at_chr10:4713181..4713220,+ | |description=CAGE_peak_at_chr10:4713181..4713220,+ | ||
|id=chr10:4713181..4713220,+ | |id=chr10:4713181..4713220,+ | ||
|ontology_enrichment_celltype=CL:0002076!3.36e-13!43;CL:0000066!1.32e-12!254;CL:0000223!6.15e-11!59;CL:0002166!5.64e-09!3;CL:0002621!2.01e-08!3;CL:0002159!7.27e-07!13 | |ontology_enrichment_celltype=CL:0002076!3.36e-13!43;CL:0000066!1.32e-12!254;CL:0000223!6.15e-11!59;CL:0002166!5.64e-09!3;CL:0002621!2.01e-08!3;CL:0002159!7.27e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002166;1.56e-34;3!CL:0002159;3.46e-28;14!CL:0002621;8.75e-16;3!CL:0000362;1.57e-11;9!CL:0002077;1.76e-10;34!CL:0000312;1.06e-09;5!CL:0000240;3.13e-08;6!CL:0000311;3.13e-08;6!CL:0000079;3.13e-08;6!CL:0000237;3.13e-08;6!CL:0000317;9.01e-07;2!CL:1000448;9.01e-07;2!CL:0002308;9.01e-07;2!CL:0002140;9.01e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.75e-34,3;CL:0002159,3.46e-28,14;CL:0002621,1.22e-15,3;CL:0000362,1.52e-11,9;CL:0002077,2.01e-11,34;CL:0000312,1.11e-09,5;CL:0000066,5.01e-09,253;CL:0000240,3.25e-08,6;CL:0000311,3.25e-08,6;CL:0000079,3.25e-08,6;CL:0000237,3.25e-08,6;CL:0000036,3.25e-08,6;CL:0000357,3.25e-08,6;CL:0000114,3.25e-08,6;CL:0000317,8.06e-07,2;CL:1000448,8.06e-07,2;CL:0002308,8.06e-07,2;CL:0002140,8.06e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000357;3.13e-08;6!CL:0000114;3.13e-08;6 | |||
|ontology_enrichment_disease=DOID:120!8.09e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:5662;2.75e-12;1!DOID:4468;4.82e-07;2!DOID:4074;9.01e-07;2!DOID:4905;9.01e-07;2!DOID:3498;9.01e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,2.46e-12,1;DOID:4468,5.11e-07,2;DOID:4074,9.54e-07,2;DOID:4905,9.54e-07,2;DOID:3498,9.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001949!2.01e-08!3;UBERON:0001708!8.71e-07!4;UBERON:0001704!8.71e-07!4;UBERON:0005910!9.47e-07!6 | |ontology_enrichment_uberon=UBERON:0001949!2.01e-08!3;UBERON:0001708!8.71e-07!4;UBERON:0001704!8.71e-07!4;UBERON:0005910!9.47e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;4.34e-26;4!UBERON:0008895;4.34e-26;4!UBERON:0011159;5.20e-21;5!UBERON:0001949;8.75e-16;3!UBERON:0011137;7.18e-10;11!UBERON:0010323;7.18e-10;11!UBERON:0010371;4.26e-09;31!UBERON:0000486;7.16e-09;12!UBERON:0003929;2.82e-07;7!UBERON:0001003;3.98e-07;15!UBERON:0007376;3.98e-07;15!UBERON:0000075;6.15e-07;16!UBERON:0002419;9.01e-07;2!UBERON:0007771;9.01e-07;2!UBERON:0003297;9.01e-07;2!UBERON:0001821;9.01e-07;2!UBERON:0003487;9.01e-07;2!UBERON:0001820;9.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,4.74e-26,4;UBERON:0008895,4.74e-26,4;UBERON:0011159,5.57e-21,5;UBERON:0010188,1.36e-17,6;UBERON:0002539,1.36e-17,6;UBERON:0008816,1.36e-17,6;UBERON:0001949,1.22e-15,3;UBERON:0010323,7.40e-10,11;UBERON:0003102,6.05e-08,99;UBERON:0011137,7.49e-08,14;UBERON:0001003,3.90e-07,15;UBERON:0007376,3.90e-07,15;UBERON:0007383,3.90e-07,15;UBERON:0000075,6.28e-07,16;UBERON:0002419,8.06e-07,2;UBERON:0007771,8.06e-07,2;UBERON:0003297,8.06e-07,2;UBERON:0001821,8.06e-07,2;UBERON:0003487,8.06e-07,2;UBERON:0001820,8.06e-07,2;UBERON:0005089,8.06e-07,2;UBERON:0005088,8.06e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,2.51577443545116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0.337552664482532,0,0.252433774244115,0,0,1.77504796258307,0.201504196455281,0,0.386521706326594,2.18196896472668,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86575485194663,1.1240175325762,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74935335947108,2.01578553838631,2.26840155587818,0.358234090811393,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.802025881213139,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0,0,0,1.72279661398852,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,3.95599408733211,0,0,0.31481234683064,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.86101074534246,1.68471475667626,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0.667852230137435,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37596903244843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45668227720456,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0.277349346026277,0,0.0979923974143777,0,0,0.171986032471617,0,0,0,0,0,0,0.137041924646751,0,0,0,0.561111741760736,0,0,0,0,0,0,0.248505071130865,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.318593534327405,0,0.310525913752519,0,0,0.521745061811734,0,0,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0.57785949122191,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,1.71488009437418,0,0,0.354581522651905,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0.51215543128185,0,0,0.118332000730565,0,0,0.22910686854405,0.31020638566432,1.91107787795487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41157948686277,0.401206833445841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,2.51577443545116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0.337552664482532,0,0.252433774244115,0,0,1.77504796258307,0.201504196455281,0,0.386521706326594,2.18196896472668,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86575485194663,1.1240175325762,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74935335947108,2.01578553838631,2.26840155587818,0.358234090811393,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.802025881213139,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0,0,0,1.72279661398852,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,3.95599408733211,0,0,0.31481234683064,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.86101074534246,1.68471475667626,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0.667852230137435,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37596903244843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45668227720456,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0.277349346026277,0,0.0979923974143777,0,0,0.171986032471617,0,0,0,0,0,0,0.137041924646751,0,0,0,0.561111741760736,0,0,0,0,0,0,0.248505071130865,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.318593534327405,0,0.310525913752519,0,0,0.521745061811734,0,0,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0.57785949122191,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,1.71488009437418,0,0,0.354581522651905,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0.51215543128185,0,0,0.118332000730565,0,0,0.22910686854405,0.31020638566432,1.91107787795487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41157948686277,0.401206833445841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:4713181..4713220,+ | |short_description=p@chr10:4713181..4713220,+ | ||
}} | }} |
Latest revision as of 13:51, 23 July 2015
Short description: | p@chr10:4713181..4713220, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:4713181..4713220, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.75e-34 | 3 |
general ecto-epithelial cell | 3.46e-28 | 14 |
gingival epithelial cell | 1.22e-15 | 3 |
epidermal cell | 1.52e-11 | 9 |
ecto-epithelial cell | 2.01e-11 | 34 |
keratinocyte | 1.11e-09 | 5 |
epithelial cell | 5.01e-09 | 253 |
stratified squamous epithelial cell | 3.25e-08 | 6 |
keratin accumulating cell | 3.25e-08 | 6 |
stratified epithelial cell | 3.25e-08 | 6 |
keratinizing barrier epithelial cell | 3.25e-08 | 6 |
epithelial fate stem cell | 3.25e-08 | 6 |
stratified epithelial stem cell | 3.25e-08 | 6 |
surface ectodermal cell | 3.25e-08 | 6 |
sebum secreting cell | 8.06e-07 | 2 |
epithelial cell of sweat gland | 8.06e-07 | 2 |
epithelial cell of skin gland | 8.06e-07 | 2 |
acinar cell of sebaceous gland | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 4.74e-26 | 4 |
splanchnocranium | 4.74e-26 | 4 |
primary subdivision of cranial skeletal system | 5.57e-21 | 5 |
protuberance | 1.36e-17 | 6 |
pharyngeal arch | 1.36e-17 | 6 |
embryonic head | 1.36e-17 | 6 |
gingival epithelium | 1.22e-15 | 3 |
cranial skeletal system | 7.40e-10 | 11 |
surface structure | 6.05e-08 | 99 |
axial skeletal system | 7.49e-08 | 14 |
skin epidermis | 3.90e-07 | 15 |
outer epithelium | 3.90e-07 | 15 |
enveloping layer of ectoderm | 3.90e-07 | 15 |
subdivision of skeletal system | 6.28e-07 | 16 |
skin gland | 8.06e-07 | 2 |
epidermis gland | 8.06e-07 | 2 |
gland of integumental system | 8.06e-07 | 2 |
sebaceous gland | 8.06e-07 | 2 |
skin sebaceous gland | 8.06e-07 | 2 |
sweat gland | 8.06e-07 | 2 |
sweat gland placode | 8.06e-07 | 2 |
sebaceous gland placode | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 2.46e-12 | 1 |
clear cell adenocarcinoma | 5.11e-07 | 2 |
pancreas adenocarcinoma | 9.54e-07 | 2 |
pancreatic carcinoma | 9.54e-07 | 2 |
pancreatic ductal adenocarcinoma | 9.54e-07 | 2 |