FFCP PHASE1:Hg19::chr14:50359705..50359733,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=382 | |EntrezGene=382 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=659 | |HGNC=659 | ||
|TSSclassifier=strong | |||
|UniProt=P62330,Q6FGZ2 | |UniProt=P62330,Q6FGZ2 | ||
|association_with_transcript=-2bp_to_NM_001663,uc001wxg.3_5end | |association_with_transcript=-2bp_to_NM_001663,uc001wxg.3_5end | ||
|cluster_id=chr14:50359705..50359733,+ | |||
|description=CAGE_peak_3_at_ARF6_5end | |description=CAGE_peak_3_at_ARF6_5end | ||
|id=chr14:50359705..50359733,+ | |id=chr14:50359705..50359733,+ | ||
|ontology_enrichment_celltype=CL:0000548!3.24e-14!679;CL:0000004!3.24e-14!679;CL:0000255!3.24e-14!679;CL:0000012!8.00e-14!682;CL:0002057!9.88e-12!42;CL:0000063!4.16e-11!578;CL:0000860!1.64e-10!45;CL:0000003!1.57e-09!722;CL:0002009!1.61e-09!65;CL:0002371!2.89e-09!591;CL:0000839!5.42e-09!70;CL:0002194!7.59e-09!63;CL:0000576!7.59e-09!63;CL:0000040!7.59e-09!63;CL:0000559!7.59e-09!63;CL:0002031!1.36e-08!124;CL:0000144!2.05e-08!625;CL:0000738!2.98e-08!140;CL:0000557!3.69e-08!71;CL:0000766!1.57e-07!76;CL:0002087!2.70e-07!119 | |ontology_enrichment_celltype=CL:0000548!3.24e-14!679;CL:0000004!3.24e-14!679;CL:0000255!3.24e-14!679;CL:0000012!8.00e-14!682;CL:0002057!9.88e-12!42;CL:0000063!4.16e-11!578;CL:0000860!1.64e-10!45;CL:0000003!1.57e-09!722;CL:0002009!1.61e-09!65;CL:0002371!2.89e-09!591;CL:0000839!5.42e-09!70;CL:0002194!7.59e-09!63;CL:0000576!7.59e-09!63;CL:0000040!7.59e-09!63;CL:0000559!7.59e-09!63;CL:0002031!1.36e-08!124;CL:0000144!2.05e-08!625;CL:0000738!2.98e-08!140;CL:0000557!3.69e-08!71;CL:0000766!1.57e-07!76;CL:0002087!2.70e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.91e-11;33!CL:0002057;3.91e-11;33!CL:0000473;2.91e-09;39!CL:0000234;2.91e-09;39!CL:1000507;1.37e-07;10!CL:1000494;1.37e-07;10!CL:0000576;6.32e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.71e-12,42;CL:0002057,9.71e-12,42;CL:0000473,1.42e-11,48;CL:0000234,1.42e-11,48;CL:0002009,8.72e-11,61;CL:0000839,3.88e-10,66;CL:0002194,4.55e-10,59;CL:0000576,4.55e-10,59;CL:0000040,4.55e-10,59;CL:0000559,4.55e-10,59;CL:0002031,2.47e-09,120;CL:0000557,3.01e-09,67;CL:0000738,5.66e-09,136;CL:0000766,1.53e-08,72;CL:0002087,5.74e-08,115;CL:1000507,1.74e-07,10;CL:1000494,1.74e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;2.47e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.55e-09!80;UBERON:0004765!1.95e-07!101;UBERON:0001434!1.95e-07!101;UBERON:0001474!2.48e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.37e-07;10!UBERON:0009773;1.37e-07;10!UBERON:0001231;1.37e-07;10!UBERON:0004810;1.37e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.45e-10,76;UBERON:0001474,3.30e-08,82;UBERON:0001434,6.02e-08,100;UBERON:0004765,1.17e-07,90;UBERON:0004810,1.74e-07,10;UBERON:0002390,5.06e-07,98;UBERON:0003061,5.06e-07,98 | |||
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| ||
|short_description=p3@ARF6 | |short_description=p3@ARF6 | ||
}} | }} |
Latest revision as of 02:36, 20 September 2015
Short description: | p3@ARF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARF6_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_NM_001663, uc001wxg.3_5end |
EntrezGene: | ARF6 |
HGNC: | 659 |
UniProt: | P62330Q6FGZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.71e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.71e-12 | 42 |
defensive cell | 1.42e-11 | 48 |
phagocyte | 1.42e-11 | 48 |
macrophage dendritic cell progenitor | 8.72e-11 | 61 |
myeloid lineage restricted progenitor cell | 3.88e-10 | 66 |
monopoietic cell | 4.55e-10 | 59 |
monocyte | 4.55e-10 | 59 |
monoblast | 4.55e-10 | 59 |
promonocyte | 4.55e-10 | 59 |
hematopoietic lineage restricted progenitor cell | 2.47e-09 | 120 |
granulocyte monocyte progenitor cell | 3.01e-09 | 67 |
leukocyte | 5.66e-09 | 136 |
myeloid leukocyte | 1.53e-08 | 72 |
nongranular leukocyte | 5.74e-08 | 115 |
kidney tubule cell | 1.74e-07 | 10 |
nephron tubule epithelial cell | 1.74e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.45e-10 | 76 |
bone element | 3.30e-08 | 82 |
skeletal system | 6.02e-08 | 100 |
skeletal element | 1.17e-07 | 90 |
nephron tubule epithelium | 1.74e-07 | 10 |
hematopoietic system | 5.06e-07 | 98 |
blood island | 5.06e-07 | 98 |