FFCP PHASE1:Hg19::chr10:5535635..5535648,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:5535635..5535648,- | |||
|coexpression_cluster_id=C2064 | |||
|description=CAGE_peak_at_chr10:5535635..5535648,- | |description=CAGE_peak_at_chr10:5535635..5535648,- | ||
|id=chr10:5535635..5535648,- | |id=chr10:5535635..5535648,- | ||
|ontology_enrichment_celltype=CL:0000039!2.67e-23!7;CL:0000586!2.67e-23!7;CL:0002541!4.73e-14!3;CL:0002563!3.46e-11!4 | |ontology_enrichment_celltype=CL:0000039!2.67e-23!7;CL:0000586!2.67e-23!7;CL:0002541!4.73e-14!3;CL:0002563!3.46e-11!4 | ||
|ontology_enrichment_celltype_v019=CL:0000039;6.36e-24;7!CL:0000586;6.36e-24;7!CL:0002563;4.49e-19;4!CL:0002253;2.60e-10;2!CL:0002231;2.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.12e-24,7;CL:0000586,6.12e-24,7;CL:0002563,4.70e-19,4;CL:0002253,2.72e-10,2;CL:0002231,2.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.69e-19;1!UBERON:0008425;4.69e-19;1 | |||
|ontology_enrichment_disease=DOID:5093!2.53e-23!4;DOID:1612!2.53e-23!4;DOID:1799!1.18e-11!1;DOID:10165!1.18e-11!1;DOID:1798!1.18e-11!1;DOID:0050687!8.96e-10!143;DOID:305!6.44e-08!106;DOID:3095!1.47e-07!22;DOID:2994!1.47e-07!22 | |ontology_enrichment_disease=DOID:5093!2.53e-23!4;DOID:1612!2.53e-23!4;DOID:1799!1.18e-11!1;DOID:10165!1.18e-11!1;DOID:1798!1.18e-11!1;DOID:0050687!8.96e-10!143;DOID:305!6.44e-08!106;DOID:3095!1.47e-07!22;DOID:2994!1.47e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:1799;1.56e-19;1!DOID:10165;1.56e-19;1!DOID:1798;1.56e-19;1!DOID:5093;5.15e-19;4!DOID:1612;5.15e-19;4!DOID:3095;4.72e-08;22!DOID:2994;4.72e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.56e-19,1;DOID:10165,1.56e-19,1;DOID:1798,1.56e-19,1;DOID:5093,5.15e-19,4;DOID:1612,5.15e-19,4;DOID:3095,4.66e-08,22;DOID:2994,4.66e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000476!4.73e-14!3;UBERON:0000920!4.73e-14!3;UBERON:0003124!2.55e-13!7;UBERON:0001242!3.46e-11!4;UBERON:0001262!3.46e-11!4;UBERON:0004786!3.46e-11!4;UBERON:0004808!3.46e-11!4;UBERON:0001277!3.46e-11!4;UBERON:0000310!1.11e-09!10;UBERON:0003350!3.98e-09!5;UBERON:0001443!7.57e-09!11;UBERON:0000344!4.25e-08!12;UBERON:0005631!6.43e-07!14;UBERON:0000158!6.43e-07!14 | |ontology_enrichment_uberon=UBERON:0000476!4.73e-14!3;UBERON:0000920!4.73e-14!3;UBERON:0003124!2.55e-13!7;UBERON:0001242!3.46e-11!4;UBERON:0001262!3.46e-11!4;UBERON:0004786!3.46e-11!4;UBERON:0004808!3.46e-11!4;UBERON:0001277!3.46e-11!4;UBERON:0000310!1.11e-09!10;UBERON:0003350!3.98e-09!5;UBERON:0001443!7.57e-09!11;UBERON:0000344!4.25e-08!12;UBERON:0005631!6.43e-07!14;UBERON:0000158!6.43e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;4.49e-19;4!UBERON:0001262;4.49e-19;4!UBERON:0004786;4.49e-19;4!UBERON:0004808;4.49e-19;4!UBERON:0001277;4.49e-19;4!UBERON:0000485;2.49e-11;7!UBERON:0003929;2.49e-11;7!UBERON:0003350;4.95e-10;8!UBERON:0000310;3.50e-08;10!UBERON:0001443;1.62e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,4.70e-19,4;UBERON:0001262,4.70e-19,4;UBERON:0004786,4.70e-19,4;UBERON:0004808,4.70e-19,4;UBERON:0001277,4.70e-19,4;UBERON:0003350,5.06e-10,8;UBERON:0000485,5.20e-09,9;UBERON:0000310,3.50e-08,10;UBERON:0001443,1.62e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27241036569879,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23008073570678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.0315495493013,1.31189999994294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.68902247020896,11.3094631956313,2.39024218228418,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,2.12029607150911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,5.50004058410987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50794029276486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27241036569879,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23008073570678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.0315495493013,1.31189999994294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.68902247020896,11.3094631956313,2.39024218228418,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,2.12029607150911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,5.50004058410987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50794029276486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:5535635..5535648,- | |short_description=p@chr10:5535635..5535648,- | ||
}} | }} |
Latest revision as of 14:12, 23 July 2015
Short description: | p@chr10:5535635..5535648, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5535635..5535648, - |
Coexpression cluster: | C2064_Intestinal_choriocarcinoma_breast_Prostate_pancreatic_colon_MCF7 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.12e-24 | 7 |
germ cell | 6.12e-24 | 7 |
intestinal epithelial cell | 4.70e-19 | 4 |
epithelial cell of large intestine | 2.72e-10 | 2 |
epithelial cell of prostate | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 4.70e-19 | 4 |
wall of intestine | 4.70e-19 | 4 |
gastrointestinal system mucosa | 4.70e-19 | 4 |
gastrointestinal system epithelium | 4.70e-19 | 4 |
intestinal epithelium | 4.70e-19 | 4 |
epithelium of mucosa | 5.06e-10 | 8 |
simple columnar epithelium | 5.20e-09 | 9 |
breast | 3.50e-08 | 10 |
chest | 1.62e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.56e-19 | 1 |
endocrine pancreas cancer | 1.56e-19 | 1 |
pancreatic endocrine carcinoma | 1.56e-19 | 1 |
thoracic cancer | 5.15e-19 | 4 |
breast cancer | 5.15e-19 | 4 |
germ cell and embryonal cancer | 4.66e-08 | 22 |
germ cell cancer | 4.66e-08 | 22 |