FFCP PHASE1:Hg19::chr10:88734366..88734378,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:88734366..88734378,- | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_at_chr10:88734366..88734378,- | |description=CAGE_peak_at_chr10:88734366..88734378,- | ||
|id=chr10:88734366..88734378,- | |id=chr10:88734366..88734378,- | ||
|ontology_enrichment_celltype=CL:0002541!6.66e-21!3;CL:0002537!2.78e-13!5;CL:1001319!9.94e-08!1;CL:1000600!9.94e-08!1;CL:0000083!1.07e-07!4 | |ontology_enrichment_celltype=CL:0002541!6.66e-21!3;CL:0002537!2.78e-13!5;CL:1001319!9.94e-08!1;CL:1000600!9.94e-08!1;CL:0000083!1.07e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002537;2.01e-59;5!CL:0000039;6.48e-20;7!CL:0000586;6.48e-20;7!CL:0000349;2.39e-16;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.46e-59,5;CL:0000039,6.48e-20,7;CL:0000586,6.48e-20,7;CL:0000349,2.52e-16,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.05e-34;1 | |||
|ontology_enrichment_disease=DOID:178!2.52e-08!1;DOID:326!2.52e-08!1;DOID:3978!2.52e-08!1;DOID:3394!2.52e-08!1;DOID:5844!2.52e-08!1;DOID:1799!4.40e-08!1;DOID:10165!4.40e-08!1;DOID:1798!4.40e-08!1;DOID:1793!1.07e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.09e-07;22!DOID:2994;5.09e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.09e-07,22;DOID:2994,5.09e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.77e-30!14;UBERON:0000158!1.77e-30!14;UBERON:0003124!2.33e-24!7;UBERON:0000476!6.66e-21!3;UBERON:0000920!6.66e-21!3;UBERON:0000478!2.61e-17!24;UBERON:0004923!2.14e-12!57;UBERON:0000305!1.27e-09!7;UBERON:0002075!3.89e-09!18;UBERON:0004871!1.78e-08!8;UBERON:0002171!5.05e-08!1;UBERON:0006518!5.05e-08!1;UBERON:0008949!5.05e-08!1;UBERON:0000101!5.05e-08!1;UBERON:0002167!5.05e-08!1;UBERON:0001987!6.00e-08!4;UBERON:0004340!6.00e-08!4;UBERON:0004645!9.94e-08!1;UBERON:0001256!9.94e-08!1;UBERON:0001259!9.94e-08!1 | |ontology_enrichment_uberon=UBERON:0005631!1.77e-30!14;UBERON:0000158!1.77e-30!14;UBERON:0003124!2.33e-24!7;UBERON:0000476!6.66e-21!3;UBERON:0000920!6.66e-21!3;UBERON:0000478!2.61e-17!24;UBERON:0004923!2.14e-12!57;UBERON:0000305!1.27e-09!7;UBERON:0002075!3.89e-09!18;UBERON:0004871!1.78e-08!8;UBERON:0002171!5.05e-08!1;UBERON:0006518!5.05e-08!1;UBERON:0008949!5.05e-08!1;UBERON:0000101!5.05e-08!1;UBERON:0002167!5.05e-08!1;UBERON:0001987!6.00e-08!4;UBERON:0004340!6.00e-08!4;UBERON:0004645!9.94e-08!1;UBERON:0001256!9.94e-08!1;UBERON:0001259!9.94e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;9.26e-43;7!UBERON:0005631;3.07e-30;10!UBERON:0000158;3.07e-30;10!UBERON:0000478;1.82e-22;24!UBERON:0001987;1.44e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.07e-42,7;UBERON:0005631,5.99e-38,14;UBERON:0000158,5.99e-38,14;UBERON:0004871,1.72e-37,8;UBERON:0000478,1.82e-22,24;UBERON:0001987,1.32e-09,4;UBERON:0004340,1.32e-09,4;UBERON:0004923,1.49e-08,66 | |||
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|short_description=p@chr10:88734366..88734378,- | |short_description=p@chr10:88734366..88734378,- | ||
}} | }} |
Latest revision as of 16:23, 23 July 2015
Short description: | p@chr10:88734366..88734378, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:88734366..88734378, - |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.46e-59 | 5 |
germ line cell | 6.48e-20 | 7 |
germ cell | 6.48e-20 | 7 |
extraembryonic cell | 2.52e-16 | 19 |
Ontology term | p-value | n |
---|---|---|
amnion | 1.07e-42 | 7 |
extraembryonic membrane | 5.99e-38 | 14 |
membranous layer | 5.99e-38 | 14 |
somatic layer of lateral plate mesoderm | 1.72e-37 | 8 |
extraembryonic structure | 1.82e-22 | 24 |
placenta | 1.32e-09 | 4 |
allantois | 1.32e-09 | 4 |
organ component layer | 1.49e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.09e-07 | 22 |
germ cell cancer | 5.09e-07 | 22 |