FFCP PHASE1:Mm9::chr7:125743692..125743697,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74424 | |EntrezGene=74424 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q32NZ6 | |UniProt=Q32NZ6 | ||
|association_with_transcript=8bp_to_ENSMUST00000121744_5end | |association_with_transcript=8bp_to_ENSMUST00000121744_5end | ||
|cluster_id=chr7:125743692..125743697,+ | |||
|description=CAGE_peak_8_at_Tmc5_5end | |description=CAGE_peak_8_at_Tmc5_5end | ||
|id=chr7:125743692..125743697,+ | |id=chr7:125743692..125743697,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.30e-12!9;CL:0002251!1.30e-12!9;CL:0000239!2.25e-09!6;CL:0000677!2.25e-09!6;CL:0000212!2.25e-09!6;CL:0000584!2.25e-09!6;CL:0000075!7.29e-08!7 | |ontology_enrichment_celltype=CL:0002563!1.30e-12!9;CL:0002251!1.30e-12!9;CL:0000239!2.25e-09!6;CL:0000677!2.25e-09!6;CL:0000212!2.25e-09!6;CL:0000584!2.25e-09!6;CL:0000075!7.29e-08!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.38e-15,6;CL:0000677,1.38e-15,6;CL:0000584,1.38e-15,6;CL:0000075,2.46e-13,7;CL:0002563,2.52e-10,9;CL:0002251,2.52e-10,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!7.28e-26!59;UBERON:0000160!2.17e-25!43;UBERON:0000344!5.61e-20!15;UBERON:0001242!8.74e-18!13;UBERON:0000060!8.74e-18!13;UBERON:0001262!8.74e-18!13;UBERON:0004786!8.74e-18!13;UBERON:0003350!1.30e-12!9;UBERON:0004808!1.30e-12!9;UBERON:0001277!1.30e-12!9;UBERON:0004923!9.18e-11!24;UBERON:0000485!6.81e-10!11;UBERON:0001007!6.38e-08!128;UBERON:0001555!6.38e-08!128;UBERON:0007026!6.38e-08!128;UBERON:0004119!1.23e-07!130;UBERON:0000925!1.23e-07!130;UBERON:0006595!1.23e-07!130;UBERON:0004921!6.57e-07!126;UBERON:0004185!6.57e-07!126 | |ontology_enrichment_uberon=UBERON:0005409!7.28e-26!59;UBERON:0000160!2.17e-25!43;UBERON:0000344!5.61e-20!15;UBERON:0001242!8.74e-18!13;UBERON:0000060!8.74e-18!13;UBERON:0001262!8.74e-18!13;UBERON:0004786!8.74e-18!13;UBERON:0003350!1.30e-12!9;UBERON:0004808!1.30e-12!9;UBERON:0001277!1.30e-12!9;UBERON:0004923!9.18e-11!24;UBERON:0000485!6.81e-10!11;UBERON:0001007!6.38e-08!128;UBERON:0001555!6.38e-08!128;UBERON:0007026!6.38e-08!128;UBERON:0004119!1.23e-07!130;UBERON:0000925!1.23e-07!130;UBERON:0006595!1.23e-07!130;UBERON:0004921!6.57e-07!126;UBERON:0004185!6.57e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.20e-55,31;UBERON:0005409,1.07e-38,47;UBERON:0001242,2.20e-17,13;UBERON:0001262,2.20e-17,13;UBERON:0004786,2.20e-17,13;UBERON:0000344,6.40e-15,15;UBERON:0004921,8.66e-14,114;UBERON:0001007,1.74e-13,116;UBERON:0001555,1.74e-13,116;UBERON:0007026,1.74e-13,116;UBERON:0004119,3.42e-13,118;UBERON:0000925,3.42e-13,118;UBERON:0006595,3.42e-13,118;UBERON:0003350,2.52e-10,9;UBERON:0004808,2.52e-10,9;UBERON:0001277,2.52e-10,9;UBERON:0004923,6.62e-09,24;UBERON:0002108,1.29e-08,4;UBERON:0000485,2.09e-08,11;UBERON:0001155,2.12e-08,2;UBERON:0000059,2.12e-08,2 | |||
|phase1_expression=0,2.79180326111489,3.63999391511629,4.53696316960245,1.00179145989269,1.17515490338323,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.68822784320151,2.29692785646008,0.430761996159075,0.861884930743556,1.71021077510736,1.26015064879965,0.886922042621219,0,0,0,0.577703239502549,0.664938581433969,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,1.85115396664481,0,0,0.257734922644187,1.61346819698674,2.2237804384487,4.37518940058886,5.21981967698963,3.45867804920423,1.50801125280162,1.98956472041151,0.974820435595601,1.79763881730844,2.16138049874694,1.39398891278057,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0.209088296014469,0.218362563746178,0.134864346384821,0.330613822901344,0.26175594198403,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0,0.187283014939765,0.256100609619477,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,2.79180326111489,3.63999391511629,4.53696316960245,1.00179145989269,1.17515490338323,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.68822784320151,2.29692785646008,0.430761996159075,0.861884930743556,1.71021077510736,1.26015064879965,0.886922042621219,0,0,0,0.577703239502549,0.664938581433969,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,1.85115396664481,0,0,0.257734922644187,1.61346819698674,2.2237804384487,4.37518940058886,5.21981967698963,3.45867804920423,1.50801125280162,1.98956472041151,0.974820435595601,1.79763881730844,2.16138049874694,1.39398891278057,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0.209088296014469,0.218362563746178,0.134864346384821,0.330613822901344,0.26175594198403,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0,0.187283014939765,0.256100609619477,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p8@Tmc5 | |short_description=p8@Tmc5 | ||
}} | }} |
Latest revision as of 19:02, 25 September 2015
Short description: | p8@Tmc5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Tmc5_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 8bp_to_ENSMUST00000121744_5end |
EntrezGene: | Tmc5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.38e-15 | 6 |
gut absorptive cell | 1.38e-15 | 6 |
enterocyte | 1.38e-15 | 6 |
columnar/cuboidal epithelial cell | 2.46e-13 | 7 |
intestinal epithelial cell | 2.52e-10 | 9 |
epithelial cell of alimentary canal | 2.52e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.20e-55 | 31 |
gastrointestinal system | 1.07e-38 | 47 |
intestinal mucosa | 2.20e-17 | 13 |
wall of intestine | 2.20e-17 | 13 |
gastrointestinal system mucosa | 2.20e-17 | 13 |
mucosa | 6.40e-15 | 15 |
subdivision of digestive tract | 8.66e-14 | 114 |
digestive system | 1.74e-13 | 116 |
digestive tract | 1.74e-13 | 116 |
primitive gut | 1.74e-13 | 116 |
endoderm-derived structure | 3.42e-13 | 118 |
endoderm | 3.42e-13 | 118 |
presumptive endoderm | 3.42e-13 | 118 |
epithelium of mucosa | 2.52e-10 | 9 |
gastrointestinal system epithelium | 2.52e-10 | 9 |
intestinal epithelium | 2.52e-10 | 9 |
organ component layer | 6.62e-09 | 24 |
small intestine | 1.29e-08 | 4 |
simple columnar epithelium | 2.09e-08 | 11 |
colon | 2.12e-08 | 2 |
large intestine | 2.12e-08 | 2 |