FFCP PHASE1:Hg19::chr11:121972578..121972593,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-168bp_to_ENST00000530955_5end | |association_with_transcript=-168bp_to_ENST00000530955_5end | ||
|cluster_id=chr11:121972578..121972593,- | |||
|description=CAGE_peak_3_at_ENST00000530955_5end | |description=CAGE_peak_3_at_ENST00000530955_5end | ||
|id=chr11:121972578..121972593,- | |id=chr11:121972578..121972593,- | ||
|ontology_enrichment_celltype=CL:0000055!3.58e-21!180;CL:0002620!4.69e-15!23;CL:0000057!1.50e-13!75;CL:0000393!2.07e-07!60;CL:0000211!2.07e-07!60;CL:0000153!2.65e-07!9;CL:0000447!2.65e-07!9 | |ontology_enrichment_celltype=CL:0000055!3.58e-21!180;CL:0002620!4.69e-15!23;CL:0000057!1.50e-13!75;CL:0000393!2.07e-07!60;CL:0000211!2.07e-07!60;CL:0000153!2.65e-07!9;CL:0000447!2.65e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.47e-34;23!CL:0002580;1.22e-13;3!CL:0000057;4.01e-09;73!CL:0000540;2.45e-07;6!CL:0000404;2.45e-07;6!CL:0002605;7.03e-07;3!CL:0000197;8.46e-07;6!CL:0000098;8.46e-07;6!CL:0002167;8.46e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.29e-34,23;CL:0000057,6.48e-27,76;CL:0002580,1.81e-13,3;CL:0000047,2.19e-09,8;CL:0000540,1.80e-07,6;CL:0000031,1.80e-07,6;CL:0000404,1.80e-07,6;CL:0002605,8.27e-07,3;CL:0000197,8.39e-07,6;CL:0000098,8.39e-07,6;CL:0002167,8.39e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;2.45e-07;6 | |||
|ontology_enrichment_disease=DOID:17!4.39e-07!5;DOID:450!4.39e-07!5;DOID:66!4.39e-07!5;DOID:423!4.39e-07!5;DOID:0080000!4.39e-07!5;DOID:11722!4.39e-07!5 | |ontology_enrichment_disease=DOID:17!4.39e-07!5;DOID:450!4.39e-07!5;DOID:66!4.39e-07!5;DOID:423!4.39e-07!5;DOID:0080000!4.39e-07!5;DOID:11722!4.39e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;1.84e-21;5!DOID:450;1.84e-21;5!DOID:66;1.84e-21;5!DOID:423;1.84e-21;5!DOID:0080000;1.84e-21;5!DOID:11722;1.84e-21;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.13e-21,5;DOID:450,1.13e-21,5;DOID:66,1.13e-21,5;DOID:423,1.13e-21,5;DOID:0080000,1.13e-21,5;DOID:11722,1.13e-21,5 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.76e-15!86;UBERON:0001017!3.22e-15!82;UBERON:0001049!6.02e-15!57;UBERON:0005068!6.02e-15!57;UBERON:0006241!6.02e-15!57;UBERON:0007135!6.02e-15!57;UBERON:0002616!6.73e-14!59;UBERON:0000073!1.62e-13!94;UBERON:0001016!1.62e-13!94;UBERON:0000475!1.84e-13!365;UBERON:0003075!2.80e-12!86;UBERON:0007284!2.80e-12!86;UBERON:0001869!1.40e-11!32;UBERON:0001893!2.26e-11!34;UBERON:0002346!3.80e-11!90;UBERON:0002791!5.09e-11!33;UBERON:0000955!1.22e-10!69;UBERON:0006238!1.22e-10!69;UBERON:0002020!1.50e-10!34;UBERON:0003528!1.50e-10!34;UBERON:0002780!2.84e-10!41;UBERON:0001890!2.84e-10!41;UBERON:0006240!2.84e-10!41;UBERON:0000033!4.41e-10!123;UBERON:0003080!7.53e-10!42;UBERON:0003056!1.94e-09!61;UBERON:0000153!6.12e-09!129;UBERON:0007811!6.12e-09!129;UBERON:0000956!7.92e-09!25;UBERON:0000203!7.92e-09!25;UBERON:0004121!1.46e-07!169;UBERON:0000914!2.79e-07!83;UBERON:0002329!2.79e-07!83;UBERON:0003077!2.79e-07!83;UBERON:0003059!2.79e-07!83;UBERON:0007282!2.79e-07!83;UBERON:0009618!2.79e-07!83;UBERON:0007285!2.79e-07!83;UBERON:0000924!4.84e-07!173;UBERON:0006601!4.84e-07!173;UBERON:0001950!7.12e-07!20;UBERON:0002097!7.44e-07!40;UBERON:0002199!7.60e-07!45;UBERON:0002416!7.60e-07!45;UBERON:0002619!8.76e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.75e-12;41!UBERON:0002199;3.15e-11;46!UBERON:0002416;3.15e-11;46!UBERON:0003102;8.85e-08;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,7.27e-18,41;UBERON:0002199,1.41e-15,46;UBERON:0002416,1.41e-15,46;UBERON:0003102,1.21e-07,99 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.563817616383885,1.0007329835313,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0.495065411840187,0,0,0,0,0,0.61560529038394,0,0.313454721478088,5.72471974262113,0.136874425072884,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,2.00535164254356,1.30361867064741,0.795285947051099,0.973269740605272,0.283604451492204,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,1.32409180813219,0.860509862246441,0,0,0,0,1.24484414159907,0,0,0.302714855289863,0,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0,0,0.122834317311768,0,0,0.741800787835671,0,0,0.168336113954066,0.125118519871964,0,1.75591048352335,0.30648779579902,1.20190447125277,0.113432183160021,2.51145489964407,1.06778694409284,1.90738711043606,1.80054657650641,2.16410311400722,2.31876486041066,0.930584281657949,2.36286865137773,2.92311015483596,3.78650661366172,2.02509777013059,2.90962902273861,2.84007674013291,1.20902517873168,1.01736355386293,0,0,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0.43596006883328,0,0.904902010304444,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0.479249710983165,3.44585807502342,0,0,0,0,0,0,0,0,0.254094624222463,2.60279707715243,4.63973287666617,4.85797169469611,1.91381625495949,0,0,0,0.49076596687656,0,0,1.03985430765404,0.178428988797162,1.26161932027148,1.7571212248907,1.20378439891088,0,0,0,0.921845842708516,0.434418072340414,0.195801157462741,0,0,0,0,0,0,0,1.24053903909388,3.37616341233737,1.12264037773229,0.512556597022804,1.53512174720011,0.160853921143607,0,0.154209693802656,0,0.492762936082855,0,0,0,0,0,0.114814448164607,0.364182336013434,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.290012154876366,0.308097234229289,0.15350367472613,0.137836572484531,0.751941714077915,0.725083469571143,0.255679882248303,0.178064071293475,0,0,0.127612712494584,0,0.929691098594572,1.5740617341532,0,0.924100740528266,0,0,0,0,0,0.316379424718726,0.190630193923825,0.511795582622668,0,1.59101623962968,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0.487426979262569,0,0.545999645631943,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0.578775534266688,0,0,0,0.845086807596724,1.72093622644862,0.491245205065606,0,0,0.844430541190656,0.658589785919804,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.110579259931225,0.295547618953547,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,1.83643656978294,0.126373159256976,0,0,0,0.330991955875499,0,0,0,0.277349346026277,0,0,0,0,0.343972064943233,0,0,0,0,0.176512253383001,0.225980740780532,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,1.08089965062721,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.511164065356265,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.3755727921195,0.573409195690071,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0.467426619694449,0.554805861502613,0.378806010550178,0,0.889811221596536,0,0.151230923763239,0.15543720058278,0.443565449968902,0,0.449803112163605,0.155262956876259,0.414706207840855,0.265841714557995,0,0,0,0,0.181848659202559,0,0.464033759878494,0.398095888698616,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.352675943690684,0,0.642292250964595,0,0.159633859057151,0,4.53729053199093,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0.0675375846183947,0.781078098613847,0.206686796501184,0,8.75159694429151,0,0,0,0,0,0,0,0.455324382702595,0,0,0,1.01954599465248,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0.245148321753905,0,0.392616934229891,0.297046400327086,0.4226557275834,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0.271965960763659,2.61810414204226,0,1.48798007266701,0,0,0,0,0,0,0,0,0,0,0,0.82916943945877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| ||
|short_description=p3@ENST00000530955 | |short_description=p3@ENST00000530955 | ||
}} | }} |
Latest revision as of 19:16, 23 July 2015
Short description: | p3@ENST00000530955 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000530955_5end |
Coexpression cluster: | NA |
Association with transcript: | -168bp_to_ENST00000530955_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.29e-34 | 23 |
fibroblast | 6.48e-27 | 76 |
preadipocyte of the breast | 1.81e-13 | 3 |
neuronal stem cell | 2.19e-09 | 8 |
neuron | 1.80e-07 | 6 |
neuroblast | 1.80e-07 | 6 |
electrically signaling cell | 1.80e-07 | 6 |
astrocyte of the cerebral cortex | 8.27e-07 | 3 |
receptor cell | 8.39e-07 | 6 |
sensory epithelial cell | 8.39e-07 | 6 |
olfactory epithelial cell | 8.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin of body | 7.27e-18 | 41 |
integument | 1.41e-15 | 46 |
integumental system | 1.41e-15 | 46 |
surface structure | 1.21e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.13e-21 | 5 |
myotonic disease | 1.13e-21 | 5 |
muscle tissue disease | 1.13e-21 | 5 |
myopathy | 1.13e-21 | 5 |
muscular disease | 1.13e-21 | 5 |
myotonic dystrophy | 1.13e-21 | 5 |