FFCP PHASE1:Hg19::chr11:12695944..12695989,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7003 | |EntrezGene=7003 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11714 | |HGNC=11714 | ||
|TSSclassifier=strong | |||
|UniProt=P28347,A4FUP2,Q59EF3 | |UniProt=P28347,A4FUP2,Q59EF3 | ||
|association_with_transcript=0bp_to_ENST00000361905,NM_021961,uc001mkj.3_5end | |association_with_transcript=0bp_to_ENST00000361905,NM_021961,uc001mkj.3_5end | ||
|cluster_id=chr11:12695944..12695989,+ | |||
|description=CAGE_peak_1_at_TEAD1_5end | |description=CAGE_peak_1_at_TEAD1_5end | ||
|id=chr11:12695944..12695989,+ | |id=chr11:12695944..12695989,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.33e-23!180;CL:0000057!1.18e-18!75;CL:0002620!1.33e-10!23;CL:0000133!4.35e-08!59;CL:0000220!2.89e-07!246;CL:0002321!4.09e-07!248 | |ontology_enrichment_celltype=CL:0000055!1.33e-23!180;CL:0000057!1.18e-18!75;CL:0002620!1.33e-10!23;CL:0000133!4.35e-08!59;CL:0000220!2.89e-07!246;CL:0002321!4.09e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.31e-10;23!CL:0000057;1.78e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.45e-19,76;CL:0002620,1.20e-10,23;CL:0000133,4.06e-08,59;CL:0002321,2.73e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.14e-11!143 | |ontology_enrichment_disease=DOID:0050687!3.14e-11!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.42e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.75e-16!365;UBERON:0003102!6.78e-14!95;UBERON:0000481!5.12e-13!347;UBERON:0003104!1.06e-09!238;UBERON:0009142!1.06e-09!238;UBERON:0002097!1.17e-09!40;UBERON:0002199!1.71e-09!45;UBERON:0002416!1.71e-09!45;UBERON:0000468!2.41e-09!659;UBERON:0002100!4.53e-09!216;UBERON:0005256!3.83e-08!143;UBERON:0000062!1.72e-07!511;UBERON:0000064!2.26e-07!219;UBERON:0000480!3.28e-07!626;UBERON:0000467!3.35e-07!625;UBERON:0001007!3.58e-07!155;UBERON:0001555!3.58e-07!155;UBERON:0007026!3.58e-07!155;UBERON:0000924!6.72e-07!173;UBERON:0006601!6.72e-07!173;UBERON:0000914!9.34e-07!83;UBERON:0002329!9.34e-07!83;UBERON:0003077!9.34e-07!83;UBERON:0003059!9.34e-07!83;UBERON:0007282!9.34e-07!83;UBERON:0009618!9.34e-07!83;UBERON:0007285!9.34e-07!83 | |ontology_enrichment_uberon=UBERON:0000475!2.75e-16!365;UBERON:0003102!6.78e-14!95;UBERON:0000481!5.12e-13!347;UBERON:0003104!1.06e-09!238;UBERON:0009142!1.06e-09!238;UBERON:0002097!1.17e-09!40;UBERON:0002199!1.71e-09!45;UBERON:0002416!1.71e-09!45;UBERON:0000468!2.41e-09!659;UBERON:0002100!4.53e-09!216;UBERON:0005256!3.83e-08!143;UBERON:0000062!1.72e-07!511;UBERON:0000064!2.26e-07!219;UBERON:0000480!3.28e-07!626;UBERON:0000467!3.35e-07!625;UBERON:0001007!3.58e-07!155;UBERON:0001555!3.58e-07!155;UBERON:0007026!3.58e-07!155;UBERON:0000924!6.72e-07!173;UBERON:0006601!6.72e-07!173;UBERON:0000914!9.34e-07!83;UBERON:0002329!9.34e-07!83;UBERON:0003077!9.34e-07!83;UBERON:0003059!9.34e-07!83;UBERON:0007282!9.34e-07!83;UBERON:0009618!9.34e-07!83;UBERON:0007285!9.34e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.07e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.94e-13,99;UBERON:0002097,1.64e-09,41;UBERON:0002199,2.27e-09,46;UBERON:0002416,2.27e-09,46;UBERON:0001007,2.42e-08,145;UBERON:0001555,2.42e-08,145;UBERON:0007026,2.42e-08,145;UBERON:0003104,2.95e-08,160;UBERON:0009142,2.95e-08,160;UBERON:0004119,1.61e-07,160;UBERON:0000925,1.61e-07,160;UBERON:0006595,1.61e-07,160;UBERON:0002100,1.84e-07,199;UBERON:0005256,8.92e-07,122 | |||
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| ||
|short_description=p1@TEAD1 | |short_description=p1@TEAD1 | ||
}} | }} |
Latest revision as of 15:29, 16 September 2015
Short description: | p1@TEAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TEAD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000361905, NM_021961, uc001mkj.3_5end |
EntrezGene: | TEAD1 |
HGNC: | 11714 |
UniProt: | P28347A4FUP2Q59EF3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.45e-19 | 76 |
skin fibroblast | 1.20e-10 | 23 |
neurectodermal cell | 4.06e-08 | 59 |
embryonic cell | 2.73e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.94e-13 | 99 |
skin of body | 1.64e-09 | 41 |
integument | 2.27e-09 | 46 |
integumental system | 2.27e-09 | 46 |
digestive system | 2.42e-08 | 145 |
digestive tract | 2.42e-08 | 145 |
primitive gut | 2.42e-08 | 145 |
mesenchyme | 2.95e-08 | 160 |
entire embryonic mesenchyme | 2.95e-08 | 160 |
endoderm-derived structure | 1.61e-07 | 160 |
endoderm | 1.61e-07 | 160 |
presumptive endoderm | 1.61e-07 | 160 |
trunk | 1.84e-07 | 199 |
trunk mesenchyme | 8.92e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.42e-11 | 143 |