FFCP PHASE1:Hg19::chr11:16133375..16133390,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55553 | |EntrezGene=55553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16421 | |HGNC=16421 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENST00000524650_5end | |association_with_transcript=24bp_to_ENST00000524650_5end | ||
|cluster_id=chr11:16133375..16133390,- | |||
|description=CAGE_peak_19_at_SOX6_5end | |description=CAGE_peak_19_at_SOX6_5end | ||
|id=chr11:16133375..16133390,- | |id=chr11:16133375..16133390,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.68e-08;3!UBERON:0006241;7.50e-08;3!UBERON:0003057;7.50e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;2.60e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.23e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.68e-53!115;UBERON:0001049!2.18e-23!57;UBERON:0005068!2.18e-23!57;UBERON:0006241!2.18e-23!57;UBERON:0007135!2.18e-23!57;UBERON:0002346!2.64e-20!90;UBERON:0005743!5.57e-20!86;UBERON:0001017!7.51e-20!82;UBERON:0000955!8.35e-19!69;UBERON:0006238!8.35e-19!69;UBERON:0002616!1.10e-18!59;UBERON:0001893!1.22e-18!34;UBERON:0002020!3.73e-18!34;UBERON:0003528!3.73e-18!34;UBERON:0001869!6.97e-18!32;UBERON:0002780!7.32e-18!41;UBERON:0001890!7.32e-18!41;UBERON:0006240!7.32e-18!41;UBERON:0003080!2.70e-17!42;UBERON:0002791!3.32e-17!33;UBERON:0000073!3.78e-17!94;UBERON:0001016!3.78e-17!94;UBERON:0003075!3.44e-16!86;UBERON:0007284!3.44e-16!86;UBERON:0000924!2.63e-13!173;UBERON:0006601!2.63e-13!173;UBERON:0000153!2.77e-13!129;UBERON:0007811!2.77e-13!129;UBERON:0002619!4.98e-13!22;UBERON:0001950!2.81e-12!20;UBERON:0000033!1.04e-11!123;UBERON:0003056!2.28e-11!61;UBERON:0000956!4.06e-11!25;UBERON:0000203!4.06e-11!25;UBERON:0004121!1.26e-10!169;UBERON:0002308!3.68e-09!9;UBERON:0000125!3.68e-09!9;UBERON:0000025!6.41e-08!194;UBERON:0000369!7.15e-08!4;UBERON:0002435!7.15e-08!4;UBERON:0000204!7.15e-08!4;UBERON:0010082!7.15e-08!4;UBERON:0000200!1.08e-07!6;UBERON:0003076!2.62e-07!15;UBERON:0003057!2.62e-07!15;UBERON:0000468!3.96e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;7.50e-08;3!UBERON:0005174;7.50e-08;3!UBERON:0001137;7.50e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,8.29e-08,3;UBERON:0005174,8.29e-08,3;UBERON:0001137,8.29e-08,3 | |||
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| ||
|short_description=p19@SOX6 | |short_description=p19@SOX6 | ||
}} | }} |
Latest revision as of 22:51, 16 September 2015
Short description: | p19@SOX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SOX6_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000524650_5end |
EntrezGene: | SOX6 |
HGNC: | 16421 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spinal cord | 8.29e-08 | 3 |
dorsal region element | 8.29e-08 | 3 |
dorsum | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.23e-11 | 2 |