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FFCP PHASE1:Hg19::chr15:85427860..85427878,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=9154
|EntrezGene=9154
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=11001
|HGNC=11001
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-6bp_to_ENST00000338602_5end
|association_with_transcript=-6bp_to_ENST00000338602_5end
|cluster_id=chr15:85427860..85427878,+
|coexpression_cluster_id=C5
|description=CAGE_peak_4_at_SLC28A1_5end
|description=CAGE_peak_4_at_SLC28A1_5end
|id=chr15:85427860..85427878,+
|id=chr15:85427860..85427878,+
|ontology_enrichment_celltype=CL:0000181!2.68e-28!12;CL:0000417!2.68e-28!12;CL:0000668!2.68e-28!12;CL:0000414!2.68e-28!12;CL:0000412!2.68e-28!12;CL:0000182!2.68e-28!12
|ontology_enrichment_celltype=CL:0000181!2.68e-28!12;CL:0000417!2.68e-28!12;CL:0000668!2.68e-28!12;CL:0000414!2.68e-28!12;CL:0000412!2.68e-28!12;CL:0000182!2.68e-28!12
|ontology_enrichment_celltype_v019=CL:0000182;2.65e-13;12
|ontology_enrichment_celltype_v019_2=CL:0000182,2.65e-13,12
|ontology_enrichment_development_v019=UBERON:0003918;1.44e-07;10!UBERON:0007687;1.44e-07;10
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!4.57e-24!19;UBERON:0006925!4.57e-24!19;UBERON:0008836!4.57e-24!19;UBERON:0008835!1.07e-20!22;UBERON:0003894!1.07e-20!22;UBERON:0009854!9.02e-20!23;UBERON:0005172!2.40e-19!55;UBERON:0005173!2.40e-19!55;UBERON:0007499!3.88e-18!25;UBERON:0009497!3.88e-18!25;UBERON:0000015!3.88e-18!25;UBERON:0002423!3.88e-18!25;UBERON:0006235!3.88e-18!25;UBERON:0004161!3.88e-18!25;UBERON:0005057!2.05e-17!26;UBERON:0009856!2.05e-17!26;UBERON:0002417!2.79e-17!61;UBERON:0000916!2.79e-17!61;UBERON:0002368!1.51e-16!35;UBERON:0002365!1.70e-14!31;UBERON:0002330!1.70e-14!31;UBERON:0000949!1.17e-12!45;UBERON:0001301!1.61e-10!1;UBERON:0002530!2.02e-09!59;UBERON:0005177!3.99e-09!107;UBERON:0009569!1.50e-08!113;UBERON:0003929!5.15e-08!54
|ontology_enrichment_uberon_v019=UBERON:0002107;1.61e-14;19!UBERON:0006925;1.61e-14;19!UBERON:0002423;4.11e-11;25!UBERON:0002365;2.62e-09;31!UBERON:0002330;2.62e-09;31!UBERON:0005172;2.95e-09;52!UBERON:0005173;2.95e-09;52!UBERON:0002368;1.39e-07;33
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.61e-14,19;UBERON:0006925,1.61e-14,19;UBERON:0008836,1.61e-14,19;UBERON:0008835,1.38e-12,22;UBERON:0003894,1.38e-12,22;UBERON:0009854,4.73e-12,23;UBERON:0007499,4.11e-11,25;UBERON:0009497,4.11e-11,25;UBERON:0000015,4.11e-11,25;UBERON:0002423,4.11e-11,25;UBERON:0006235,4.11e-11,25;UBERON:0004161,4.11e-11,25;UBERON:0005172,5.40e-11,54;UBERON:0005173,5.40e-11,54;UBERON:0009856,1.07e-10,26;UBERON:0002417,7.14e-10,60;UBERON:0000916,7.14e-10,60;UBERON:0002365,5.14e-09,31;UBERON:0002330,5.14e-09,31;UBERON:0002368,5.16e-08,35
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42311289670768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,12.7767538168091,15.3605375737165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.315132729228895,0.329663433524666,0.337017719270924,0,0,0,0,0,0,0,0,0,0,0,4.3343139014559,0.786818822024972,0,0,0,0,0,0,0,0,0,0,0,0,0,7.4741639175822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59113109462346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16087642702245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p4@SLC28A1
|short_description=p4@SLC28A1
}}
}}

Latest revision as of 13:14, 19 September 2015

Short description:p4@SLC28A1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_4_at_SLC28A1_5end
Coexpression cluster:C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas
Association with transcript: -6bp_to_ENST00000338602_5end
EntrezGene:SLC28A1
HGNC: 11001
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data