FFCP PHASE1:Hg19::chr10:128110441..128110456,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:128110441..128110456,-
|short_description=p1@ENST00000456514
|description=CAGE_peak_1_at_ENST00000456514_5end
|association_with_transcript=0bp_to_ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000456514_5end | |||
|cluster_id=chr10:128110441..128110456,- | |||
|description=CAGE_peak_1_at_ENST00000456514_5end | |||
|id=chr10:128110441..128110456,- | |||
|ontology_enrichment_celltype=CL:0000055!1.38e-26!180;CL:0000057!4.44e-20!75;CL:0002620!5.71e-13!23;CL:0000048!5.92e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.80e-10;23!CL:0000153;8.55e-10;9!CL:0000447;8.55e-10;9!CL:0000138;4.21e-08;6!CL:0000499;1.38e-07;28!CL:0000188;5.25e-07;9!CL:0000680;9.66e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,4.26e-10,9;CL:0000447,4.26e-10,9;CL:0002620,4.73e-10,23;CL:0000058,2.28e-08,6;CL:0000138,2.28e-08,6;CL:0000499,7.65e-08,28;CL:0000057,1.77e-07,76;CL:0000188,4.00e-07,9;CL:0000135,6.45e-07,3;CL:0000388,6.45e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.17e-08!365;UBERON:0002199!1.61e-07!45;UBERON:0002416!1.61e-07!45;UBERON:0000914!2.42e-07!83;UBERON:0002329!2.42e-07!83;UBERON:0003077!2.42e-07!83;UBERON:0003059!2.42e-07!83;UBERON:0007282!2.42e-07!83;UBERON:0009618!2.42e-07!83;UBERON:0007285!2.42e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;1.10e-11;8!UBERON:0000982;1.10e-11;8!UBERON:0004770;1.10e-11;8!UBERON:0011135;2.00e-10;5!UBERON:0002216;2.00e-10;5!UBERON:0011134;2.00e-10;5!UBERON:0002209;2.00e-10;5!UBERON:0002213;2.00e-10;5!UBERON:0007844;2.00e-10;5!UBERON:0011138;2.00e-10;5!UBERON:0001130;2.00e-10;5!UBERON:0001066;2.00e-10;5!UBERON:0001468;2.00e-10;5!UBERON:0002204;7.79e-10;70!UBERON:0001434;3.54e-09;36!UBERON:0004765;8.62e-09;26!UBERON:0000075;1.73e-08;16!UBERON:0002385;1.57e-07;31!UBERON:0001015;1.57e-07;31!UBERON:0000383;1.57e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,8.16e-12,8;UBERON:0000982,8.16e-12,8;UBERON:0004770,8.16e-12,8;UBERON:0011135,1.70e-10,5;UBERON:0002216,1.70e-10,5;UBERON:0011134,1.70e-10,5;UBERON:0002209,1.70e-10,5;UBERON:0002213,1.70e-10,5;UBERON:0005856,1.70e-10,5;UBERON:0005866,1.70e-10,5;UBERON:0005863,1.70e-10,5;UBERON:0007844,1.70e-10,5;UBERON:0011138,1.70e-10,5;UBERON:0001130,1.70e-10,5;UBERON:0001066,1.70e-10,5;UBERON:0001468,1.70e-10,5;UBERON:0000075,2.02e-08,16;UBERON:0007846,6.45e-07,3;UBERON:0000043,6.45e-07,3;UBERON:0007845,6.45e-07,3 | |||
|phase1_expression=0.363356758541113,1.2846031433459,0.422863212287913,2.00146596706261,1.34088328328186,0,0,2.52687949370732,0.261185628199839,0,0,0,0,8.53987835424322,5.63375538737457,2.6893005858071,4.82155622419182,0.730310090387373,0,0.738726348460727,0,0.940364164434263,1.71741592278634,2.32686522623903,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,1.80719576192283,2.00535164254356,2.89693037921647,1.5905718941022,4.86634870302636,0.945348171640679,0.665188192387692,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,3.70745706277013,0.860509862246441,0.709336764396714,0,0,0,0.622422070799533,0.134710672069688,0,0.151357427644931,0,0.234321431833797,0,0.570471821544449,0.298897361103602,0.352303495931295,0.323745888736263,0.421352420106746,1.42907919878425,0.737005903870608,0.826606249406124,1.18800285728205,0.247266929278557,0,0,1.17835279767846,0.250237039743928,0.831192346452549,2.19488810440419,2.14541457059314,0.300476117813194,0.113432183160021,0.358779271377724,1.06778694409284,1.27159140695737,1.20036438433761,1.44273540933814,1.8034837803194,1.11670113798954,0.843881661206331,1.16924406193438,2.77677151668526,1.93304787148829,1.93975268182574,1.42003837006646,0.906768884048762,1.3564847384839,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.354920400119532,0.337169380156203,0.241011029883482,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.36669142910475,0.904902010304444,0,1.690605505112,0,0,0.514414748524284,0,0,0,0,0,1.95441710576241,0,1.58390374586686,0.602878754119172,0.871533458600294,0.099972991182057,0,0,0,1.91699884393266,0,0,3.04040744001916,1.64381058040307,0.358121926479791,0,0,0,0,0.254094624222463,0,0,1.00509759200609,0,0,0,0,9.20186187893549,1.50051156317903,1.35632511849868,0.623912584592421,1.24900292158013,0.630809660135739,0.468565659970853,0,0,0,0.664225598535437,0.553107505625109,0.434418072340414,0.587403472388222,0,0,0,0,0,0,0,0.496215615637554,0.767309866440312,0.280660094433074,0.256278298511402,0.511707249066704,0.160853921143607,0,0.154209693802656,0.532685175939381,0.574890092096664,0.519254429183621,0.348631135379878,0,0,0,0.229628896329213,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0,0.103041011647722,0.640986253728404,0.330037999682352,0,0,0,0.580024309752732,1.23238893691716,1.84204409671355,0.827019434907183,5.15617175367713,1.74020032697074,1.19317278382541,2.75999310504886,0,0,0,0,0,2.51849877464512,0.6970372701606,0.308033580176089,1.06461206063404,2.60979897622522,1.11194531462352,0.143124886741991,0,1.58189712359363,0.190630193923825,0,0,0.318203247925937,0,0.359744915166629,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0,0,0,0,1.47775344708365,2.63435914367922,0.379473173765715,0.349934720244983,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,6.23328748128273,0,0,0.398495976502139,0,0,0.20453736500431,0,0.311039587661807,0.0898683511473268,1.25314822272926,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0,0,0,0,0,0,5.01345045726805,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0,0,0.19566461893209,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0.293977192243133,1.56706571844725,0,0,0.387025325156341,1.46178634172371,1.14961639874493,0,0,0,2.74083849293502,5.36529451598072,0,0,1.92381168603681,0,0,0,0,0,0,0.49701014226173,0,1.49494626680975,0.523014231561666,8.36385384617839,0.288950589901519,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0,1.08599920350743,1.72844298240254,0.979762080328227,1.19730191562487,0,3.23737241392301,0.566560457600628,0,0,0.258565912723101,1.3223260174269,0,2.11444506695002,0,0,0,0,0,0,1.27668251554036,1.08803560673895,0,1.22538230705385,0.327872630709804,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0.443716206147409,0.248385611765534,0,0.499921631848426,0,0,0,0,0,1.94031243752936,2.57084640831947,0.554805861502613,6.25029917407794,10.5658518736082,4.44905610798268,0.686520205190771,2.11723293268535,1.5543720058278,4.43565449968902,0.796483835818512,0.899606224327209,0.465788870628778,0.829412415681711,0.53168342911599,0.521745061811734,0.901545653983311,0.380805212168795,1.62748293281865,0.181848659202559,0.214821114084977,0,0.398095888698616,2.0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| ||
|short_description=p1@ENST00000456514 | |||
}} | }} |
Latest revision as of 11:31, 23 July 2015
Short description: | p1@ENST00000456514 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000456514_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000456514_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 4.26e-10 | 9 |
carbohydrate secreting cell | 4.26e-10 | 9 |
skin fibroblast | 4.73e-10 | 23 |
chondroblast | 2.28e-08 | 6 |
chondrocyte | 2.28e-08 | 6 |
stromal cell | 7.65e-08 | 28 |
fibroblast | 1.77e-07 | 76 |
cell of skeletal muscle | 4.00e-07 | 9 |
fibrocyte | 6.45e-07 | 3 |
tendon cell | 6.45e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
articulation | 8.16e-12 | 8 |
skeletal joint | 8.16e-12 | 8 |
articular system | 8.16e-12 | 8 |
intervertebral cartilage | 1.70e-10 | 5 |
symphysis | 1.70e-10 | 5 |
nonsynovial joint | 1.70e-10 | 5 |
fibrous joint | 1.70e-10 | 5 |
cartilaginous joint | 1.70e-10 | 5 |
developing mesenchymal condensation | 1.70e-10 | 5 |
pre-cartilage condensation | 1.70e-10 | 5 |
cartilaginous condensation | 1.70e-10 | 5 |
cartilage element | 1.70e-10 | 5 |
post-cranial axial skeletal system | 1.70e-10 | 5 |
vertebral column | 1.70e-10 | 5 |
intervertebral disk | 1.70e-10 | 5 |
intervertebral joint | 1.70e-10 | 5 |
subdivision of skeletal system | 2.02e-08 | 16 |
dense regular connective tissue | 6.45e-07 | 3 |
tendon | 6.45e-07 | 3 |
regular connective tissue | 6.45e-07 | 3 |