FFCP PHASE1:Mm9::chr7:72948871..72948878,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100503969 | |EntrezGene=100503969 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-59bp_to_NR_045301,uc009hgv.1_5end | |association_with_transcript=-59bp_to_NR_045301,uc009hgv.1_5end | ||
|cluster_id=chr7:72948871..72948878,+ | |||
|description=CAGE_peak_5_at_1810008I18Rik_5end | |description=CAGE_peak_5_at_1810008I18Rik_5end | ||
|id=chr7:72948871..72948878,+ | |id=chr7:72948871..72948878,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.72e-07!5;CL:0000417!2.72e-07!5;CL:0000668!2.72e-07!5;CL:0000412!2.72e-07!5;CL:0000182!2.72e-07!5 | |ontology_enrichment_celltype=CL:0000181!2.72e-07!5;CL:0000417!2.72e-07!5;CL:0000668!2.72e-07!5;CL:0000412!2.72e-07!5;CL:0000182!2.72e-07!5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.03e-20,5;CL:0000057,1.83e-07,1;CL:0000632,1.83e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.16e-23!22;UBERON:0007499!1.16e-23!22;UBERON:0006925!1.16e-23!22;UBERON:0009497!1.16e-23!22;UBERON:0000015!1.16e-23!22;UBERON:0002423!1.16e-23!22;UBERON:0006235!1.16e-23!22;UBERON:0008835!1.16e-23!22;UBERON:0003894!1.16e-23!22;UBERON:0004161!1.16e-23!22;UBERON:0008836!1.16e-23!22;UBERON:0009854!2.03e-22!23;UBERON:0009856!2.03e-22!23;UBERON:0002365!3.11e-20!25;UBERON:0002330!3.11e-20!25;UBERON:0000949!2.19e-13!72;UBERON:0005256!8.87e-11!47;UBERON:0005177!2.99e-10!85;UBERON:0005172!3.92e-10!49;UBERON:0005173!3.92e-10!49;UBERON:0002417!3.92e-10!49;UBERON:0000916!3.92e-10!49;UBERON:0000466!1.10e-09!79;UBERON:0003914!1.27e-09!47;UBERON:0001264!5.46e-09!12;UBERON:0003922!5.46e-09!12;UBERON:0002114!5.46e-09!12;UBERON:0003923!5.46e-09!12;UBERON:0003924!5.46e-09!12;UBERON:0003921!5.46e-09!12;UBERON:0001041!3.34e-08!92;UBERON:0001045!3.52e-08!13;UBERON:0002100!5.61e-08!98;UBERON:0005057!1.44e-07!51;UBERON:0000077!1.92e-07!97;UBERON:0002368!2.19e-07!60 | |ontology_enrichment_uberon=UBERON:0002107!1.16e-23!22;UBERON:0007499!1.16e-23!22;UBERON:0006925!1.16e-23!22;UBERON:0009497!1.16e-23!22;UBERON:0000015!1.16e-23!22;UBERON:0002423!1.16e-23!22;UBERON:0006235!1.16e-23!22;UBERON:0008835!1.16e-23!22;UBERON:0003894!1.16e-23!22;UBERON:0004161!1.16e-23!22;UBERON:0008836!1.16e-23!22;UBERON:0009854!2.03e-22!23;UBERON:0009856!2.03e-22!23;UBERON:0002365!3.11e-20!25;UBERON:0002330!3.11e-20!25;UBERON:0000949!2.19e-13!72;UBERON:0005256!8.87e-11!47;UBERON:0005177!2.99e-10!85;UBERON:0005172!3.92e-10!49;UBERON:0005173!3.92e-10!49;UBERON:0002417!3.92e-10!49;UBERON:0000916!3.92e-10!49;UBERON:0000466!1.10e-09!79;UBERON:0003914!1.27e-09!47;UBERON:0001264!5.46e-09!12;UBERON:0003922!5.46e-09!12;UBERON:0002114!5.46e-09!12;UBERON:0003923!5.46e-09!12;UBERON:0003924!5.46e-09!12;UBERON:0003921!5.46e-09!12;UBERON:0001041!3.34e-08!92;UBERON:0001045!3.52e-08!13;UBERON:0002100!5.61e-08!98;UBERON:0005057!1.44e-07!51;UBERON:0000077!1.92e-07!97;UBERON:0002368!2.19e-07!60 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.48e-31,22;UBERON:0007499,1.48e-31,22;UBERON:0006925,1.48e-31,22;UBERON:0009497,1.48e-31,22;UBERON:0000015,1.48e-31,22;UBERON:0002423,1.48e-31,22;UBERON:0006235,1.48e-31,22;UBERON:0008835,1.48e-31,22;UBERON:0003894,1.48e-31,22;UBERON:0004161,1.48e-31,22;UBERON:0008836,1.48e-31,22;UBERON:0009854,3.93e-30,23;UBERON:0009856,3.93e-30,23;UBERON:0002365,1.26e-27,25;UBERON:0002330,1.26e-27,25;UBERON:0005256,8.68e-15,45;UBERON:0003914,4.21e-14,47;UBERON:0005172,1.80e-13,49;UBERON:0005173,1.80e-13,49;UBERON:0002417,1.80e-13,49;UBERON:0000916,1.80e-13,49;UBERON:0000949,2.21e-12,72;UBERON:0003929,7.46e-12,55;UBERON:0005177,3.84e-11,79;UBERON:0002368,9.45e-11,60;UBERON:0003104,1.49e-10,61;UBERON:0009142,1.49e-10,61;UBERON:0002530,8.13e-10,65;UBERON:0000490,1.20e-09,66;UBERON:0009569,1.20e-09,66;UBERON:0002100,1.40e-09,90;UBERON:0005911,3.64e-09,69;UBERON:0001041,1.05e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.74381489283248,14.2793980078628,12.9528765993076,3.24888208723835,5.37632264516803,2.10666630197628,0,0,0,0,0,0,0,0,0,0,5.59501010623394,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,5.33614728756868,0,0,0,0.405720242777006,0,0.763877555344259,3.45235364940973,2.10775794807546,0.549122826376163,1.43768206527355,0.744281895337007,0.936113019343682,2.52578877947112,15.0693827358406,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0.604647113929502,0.565815239267694,0.295301892880773,0.614870295887855,0.258428293168221,0,0,0.632073515871632,0,2.06271086496374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.187283014939765,0,0,0,0.231768651889711,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.74381489283248,14.2793980078628,12.9528765993076,3.24888208723835,5.37632264516803,2.10666630197628,0,0,0,0,0,0,0,0,0,0,5.59501010623394,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,5.33614728756868,0,0,0,0.405720242777006,0,0.763877555344259,3.45235364940973,2.10775794807546,0.549122826376163,1.43768206527355,0.744281895337007,0.936113019343682,2.52578877947112,15.0693827358406,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0.604647113929502,0.565815239267694,0.295301892880773,0.614870295887855,0.258428293168221,0,0,0.632073515871632,0,2.06271086496374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0.187283014939765,0,0,0,0.231768651889711,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0,0,0 | ||
|short_description=p5@1810008I18Rik | |short_description=p5@1810008I18Rik | ||
}} | }} |
Latest revision as of 00:52, 27 September 2015
Short description: | p5@1810008I18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_1810008I18Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | -59bp_to_NR_045301, uc009hgv.1_5end |
EntrezGene: | 1810008I18Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.03e-20 | 5 |
fibroblast | 1.83e-07 | 1 |
hepatic stellate cell | 1.83e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 1.48e-31 | 22 |
epithelial sac | 1.48e-31 | 22 |
digestive gland | 1.48e-31 | 22 |
epithelium of foregut-midgut junction | 1.48e-31 | 22 |
anatomical boundary | 1.48e-31 | 22 |
hepatobiliary system | 1.48e-31 | 22 |
foregut-midgut junction | 1.48e-31 | 22 |
hepatic diverticulum | 1.48e-31 | 22 |
liver primordium | 1.48e-31 | 22 |
septum transversum | 1.48e-31 | 22 |
liver bud | 1.48e-31 | 22 |
digestive tract diverticulum | 3.93e-30 | 23 |
sac | 3.93e-30 | 23 |
exocrine gland | 1.26e-27 | 25 |
exocrine system | 1.26e-27 | 25 |
trunk mesenchyme | 8.68e-15 | 45 |
epithelial tube | 4.21e-14 | 47 |
abdomen element | 1.80e-13 | 49 |
abdominal segment element | 1.80e-13 | 49 |
abdominal segment of trunk | 1.80e-13 | 49 |
abdomen | 1.80e-13 | 49 |
endocrine system | 2.21e-12 | 72 |
gut epithelium | 7.46e-12 | 55 |
trunk region element | 3.84e-11 | 79 |
endocrine gland | 9.45e-11 | 60 |
mesenchyme | 1.49e-10 | 61 |
entire embryonic mesenchyme | 1.49e-10 | 61 |
gland | 8.13e-10 | 65 |
unilaminar epithelium | 1.20e-09 | 66 |
subdivision of trunk | 1.20e-09 | 66 |
trunk | 1.40e-09 | 90 |
endo-epithelium | 3.64e-09 | 69 |
foregut | 1.05e-07 | 80 |