FFCP PHASE1:Mm9::chr9:119250605..119250617,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=113868 | |EntrezGene=113868 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BLD7 | |UniProt=Q8BLD7 | ||
|association_with_transcript=27bp_to_ENSMUST00000063335_5end | |association_with_transcript=27bp_to_ENSMUST00000063335_5end | ||
|cluster_id=chr9:119250605..119250617,+ | |||
|description=CAGE_peak_4_at_Acaa1a_5end | |description=CAGE_peak_4_at_Acaa1a_5end | ||
|id=chr9:119250605..119250617,+ | |id=chr9:119250605..119250617,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.41e-07!25 | |ontology_enrichment_celltype=CL:0000066!3.41e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.38e-10,25;CL:0000223,1.07e-08,20;CL:0002563,5.70e-08,9;CL:0002251,5.70e-08,9;CL:0000075,8.72e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.48e-12!130;UBERON:0000925!1.48e-12!130;UBERON:0006595!1.48e-12!130;UBERON:0001007!6.50e-12!128;UBERON:0001555!6.50e-12!128;UBERON:0007026!6.50e-12!128;UBERON:0000160!8.51e-12!43;UBERON:0005409!2.50e-11!59;UBERON:0004921!5.56e-11!126;UBERON:0004185!5.56e-11!126;UBERON:0000344!3.64e-10!15;UBERON:0001242!5.99e-09!13;UBERON:0000060!5.99e-09!13;UBERON:0001262!5.99e-09!13;UBERON:0004786!5.99e-09!13 | |ontology_enrichment_uberon=UBERON:0004119!1.48e-12!130;UBERON:0000925!1.48e-12!130;UBERON:0006595!1.48e-12!130;UBERON:0001007!6.50e-12!128;UBERON:0001555!6.50e-12!128;UBERON:0007026!6.50e-12!128;UBERON:0000160!8.51e-12!43;UBERON:0005409!2.50e-11!59;UBERON:0004921!5.56e-11!126;UBERON:0004185!5.56e-11!126;UBERON:0000344!3.64e-10!15;UBERON:0001242!5.99e-09!13;UBERON:0000060!5.99e-09!13;UBERON:0001262!5.99e-09!13;UBERON:0004786!5.99e-09!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.06e-13,15;UBERON:0000160,1.09e-11,31;UBERON:0005409,1.79e-11,47;UBERON:0004119,1.94e-11,118;UBERON:0000925,1.94e-11,118;UBERON:0006595,1.94e-11,118;UBERON:0001242,3.47e-11,13;UBERON:0001262,3.47e-11,13;UBERON:0004786,3.47e-11,13;UBERON:0001007,1.01e-10,116;UBERON:0001555,1.01e-10,116;UBERON:0007026,1.01e-10,116;UBERON:0004921,1.07e-09,114;UBERON:0004923,1.76e-08,24;UBERON:0003350,5.70e-08,9;UBERON:0004808,5.70e-08,9;UBERON:0001277,5.70e-08,9;UBERON:0009854,3.31e-07,23;UBERON:0009856,3.31e-07,23;UBERON:0000485,4.29e-07,11;UBERON:0002107,7.52e-07,22;UBERON:0007499,7.52e-07,22;UBERON:0006925,7.52e-07,22;UBERON:0009497,7.52e-07,22;UBERON:0000015,7.52e-07,22;UBERON:0002423,7.52e-07,22;UBERON:0006235,7.52e-07,22;UBERON:0008835,7.52e-07,22;UBERON:0003894,7.52e-07,22;UBERON:0004161,7.52e-07,22;UBERON:0008836,7.52e-07,22;UBERON:0002365,7.64e-07,25;UBERON:0002330,7.64e-07,25 | |||
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| ||
|short_description=p4@Acaa1a | |short_description=p4@Acaa1a | ||
}} | }} |
Latest revision as of 07:49, 26 September 2015
Short description: | p4@Acaa1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Acaa1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 27bp_to_ENSMUST00000063335_5end |
EntrezGene: | Acaa1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.38e-10 | 25 |
endodermal cell | 1.07e-08 | 20 |
intestinal epithelial cell | 5.70e-08 | 9 |
epithelial cell of alimentary canal | 5.70e-08 | 9 |
columnar/cuboidal epithelial cell | 8.72e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.06e-13 | 15 |
intestine | 1.09e-11 | 31 |
gastrointestinal system | 1.79e-11 | 47 |
endoderm-derived structure | 1.94e-11 | 118 |
endoderm | 1.94e-11 | 118 |
presumptive endoderm | 1.94e-11 | 118 |
intestinal mucosa | 3.47e-11 | 13 |
wall of intestine | 3.47e-11 | 13 |
gastrointestinal system mucosa | 3.47e-11 | 13 |
digestive system | 1.01e-10 | 116 |
digestive tract | 1.01e-10 | 116 |
primitive gut | 1.01e-10 | 116 |
subdivision of digestive tract | 1.07e-09 | 114 |
organ component layer | 1.76e-08 | 24 |
epithelium of mucosa | 5.70e-08 | 9 |
gastrointestinal system epithelium | 5.70e-08 | 9 |
intestinal epithelium | 5.70e-08 | 9 |
digestive tract diverticulum | 3.31e-07 | 23 |
sac | 3.31e-07 | 23 |
simple columnar epithelium | 4.29e-07 | 11 |
liver | 7.52e-07 | 22 |
epithelial sac | 7.52e-07 | 22 |
digestive gland | 7.52e-07 | 22 |
epithelium of foregut-midgut junction | 7.52e-07 | 22 |
anatomical boundary | 7.52e-07 | 22 |
hepatobiliary system | 7.52e-07 | 22 |
foregut-midgut junction | 7.52e-07 | 22 |
hepatic diverticulum | 7.52e-07 | 22 |
liver primordium | 7.52e-07 | 22 |
septum transversum | 7.52e-07 | 22 |
liver bud | 7.52e-07 | 22 |
exocrine gland | 7.64e-07 | 25 |
exocrine system | 7.64e-07 | 25 |