FFCP PHASE1:Hg19::chr16:87866488..87866504,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8140 | |EntrezGene=8140 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11063 | |HGNC=11063 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-378bp_to_BC114608_5end | |association_with_transcript=-378bp_to_BC114608_5end | ||
|cluster_id=chr16:87866488..87866504,- | |||
|description=CAGE_peak_10_at_SLC7A5_5end | |description=CAGE_peak_10_at_SLC7A5_5end | ||
|id=chr16:87866488..87866504,- | |id=chr16:87866488..87866504,- | ||
|ontology_enrichment_celltype=CL:0000066!5.84e-19!254;CL:0000223!8.95e-10!59;CL:0002076!3.45e-09!43;CL:0000063!4.83e-08!578;CL:0000147!2.69e-07!14;CL:0000548!3.52e-07!679;CL:0000004!3.52e-07!679;CL:0000255!3.52e-07!679;CL:0002077!5.55e-07!33;CL:0000012!7.11e-07!682 | |ontology_enrichment_celltype=CL:0000066!5.84e-19!254;CL:0000223!8.95e-10!59;CL:0002076!3.45e-09!43;CL:0000063!4.83e-08!578;CL:0000147!2.69e-07!14;CL:0000548!3.52e-07!679;CL:0000004!3.52e-07!679;CL:0000255!3.52e-07!679;CL:0002077!5.55e-07!33;CL:0000012!7.11e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0002231;5.39e-14;3!CL:0002076;4.63e-09;42!CL:0000147;1.81e-07;14!CL:0000148;4.10e-07;10!CL:0002567;4.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,3.92e-14,3;CL:0002076,3.05e-10,42;CL:0000223,3.44e-08,58;CL:0000147,2.14e-07,14;CL:0002567,4.21e-07,3;CL:0000148,5.81e-07,10;CL:0000541,5.81e-07,10;CL:0002577,8.21e-07,3;CL:0000066,9.42e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.82e-10!143;DOID:305!4.30e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.44e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,7.90e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.68e-09!169;UBERON:0000925!1.68e-09!169;UBERON:0006595!1.68e-09!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0010371;8.81e-08;31!UBERON:0001003;5.65e-07;15!UBERON:0007376;5.65e-07;15!UBERON:0000077;7.17e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.75e-07,99;UBERON:0001003,4.42e-07,15;UBERON:0007376,4.42e-07,15;UBERON:0007383,4.42e-07,15 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,2.53299878168311,0.631719873426831,0,0.491467873003018,0.697801167972428,0.436882744260345,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0.689491361473237,0,1.35426486594342,0.376484679085209,0.272906150057846,0.224723484445085,1.22433556948361,0,1.91801137739712,0,0,0,0.870627715885752,0,0,0,0,0,1.21079900526674,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,2.1686349143074,0,0,0,0,0,0,0,0,3.27865759463288,0.370784442784429,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0.132409180813219,0.573673241497627,0,0,0,1.2333377420858,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0,0,0.494533858557114,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0,0,1.54608682530637,0.545492241181669,0.860413786167011,0,0.132529768321485,0.232387885739037,0.207322110030741,1.00928340350251,0,0,1.28648187638577,0,0,0,0.354920400119532,0.337169380156203,0.482022059766964,0.330881918197182,0.435758888184812,0.237270619111097,0,0.588664395376038,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,0,2.74375713521564,0,0.301586917234893,1.20364978706088,0,1.03993478527958,0,0,0.117408694235822,0.144366447761074,0,0,0,0.858486162094873,0,0,0,0,0.335964256397719,0.283550194484773,0.716468181622786,0.290633938513962,0.766765358330422,0,0.264145302039678,0,0,0.25248486685276,0.63497894292169,4.20187268114105,3.51652341630141,0,0.822619941626588,0.901029173531752,1.14330573052231,0.112131084345361,0.43596006883328,0,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0,0.862510299438069,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0,0.300946099727719,0,1.03473071292505,0,0,0.173767228936166,0,0,0,0.215714200818617,0.106727557803444,2.72814814301633,1.66435439510497,0.604780586659361,0.248107807818777,0.153461973288062,0,0.512556597022804,0,0.160853921143607,0,0,0,0,0,0,1.57117284469109,3.00759705454927,5.43277834721788,0.918515585316854,0.182091168006717,0.131124414959424,0.902399225814824,0.0770153371044148,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0.254876273045038,0.831076008928724,0,0.657779629937804,0.522870902049801,0.256450125116389,0.328014645699706,1.62689197332152,0.206082023295445,0,0,2.29706215198469,0.650060246036521,0,2.12675580242668,0,0,0,0,0,0.0852266274161009,0.267096106940212,7.76839102196597,0.960950336825531,0.510450849978337,1.71968227454435,0,0.94443704049192,0,0,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0.9554993798559,0.424216295861138,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0,0,0.349934720244983,0.384888450902048,0,1.08890984861323,0,2.15252686335615,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0.246169610922139,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0.0927680981618513,0,0.7812832832557,0,0,0,0,0,0,0.291604613383254,0.520874984799877,0,0,0,0.110579259931225,0,0,0.980446171670911,0.975966209950223,0.153900517007594,0.227884111694002,0.69169171316418,3.2312751987518,0.217294743844016,0,0.274792780205587,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,1.05499032264014,0,0.141353071433941,0,0,0.0884575645033392,0,0,0.247127877893006,0,0,0,0,0,0.782658475728359,0.728341138602278,0,0,0.30607276163049,0,0.751617097072463,0,0,0.330991955875499,0,2.38944859545918,0,0.416024019039416,0.173559738335131,0.783939179315021,0.34823682632161,0.17472666824203,0.343972064943233,0.19351266257817,0.292357268344742,0,0.193978032976839,0.264768380074501,0,0.274083849293502,0,0,0,0.0801588202515337,0,0.599428828746391,0,0,0,0.14405479798815,0.49701014226173,1.17847017308398,0,0,0,1.15580235960608,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0,0.321506296930038,0.687697182986169,0.83088067605837,0,0,0.0607495566580247,0.670869375198532,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0.0620964029413835,0.276697269872462,0,1.66814029295813,2.56918800190471,0,0.468334905806882,0,0,0,0,0,0,0,0.457680136793847,0,0.15543720058278,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0.686791410365586,0,0,0.192619830407303,0,1.30497145982606,0,0,1.22368352253234,0.179088841081487,0,0.438568099157414,0.353378291891762,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0,0,0.516644938982447,0.567515953566836,0,0.279759015438889,0,0.127894371303652,0,0,0,0.169732529954025,0,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.63699922809025,0.707818340086442,1.28400018965175,0.924205329202706,0,1.3807198521202,0.596748666348824,0,0,0,0.523813388962845,0.49131575253029,0.295712172434091,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0.222462803784138,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0.347716544605159,0,0,0.17071847709395,0,0,0,0.170426809518315,0,0.4582137370881,0,0,0.111855431797792,0.588901401691458,0,0,0,0,0,0,0.198950775161368,0,0.45178432815584,0,0,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0,0,0.178553938605658,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.253397002022874,0.101988829741982,0,0,0,0.378893491091197,0,0,0,0,0,0.193766729508018,0,0.112131862580613,0,0,0.435433495793923,0,0,0.143444410785353,0.332660356546013,0.162806537221949,0.426909383510862,0,0.628776414746108,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,2.53299878168311,0.631719873426831,0,0.491467873003018,0.697801167972428,0.436882744260345,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0.689491361473237,0,1.35426486594342,0.376484679085209,0.272906150057846,0.224723484445085,1.22433556948361,0,1.91801137739712,0,0,0,0.870627715885752,0,0,0,0,0,1.21079900526674,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,2.1686349143074,0,0,0,0,0,0,0,0,3.27865759463288,0.370784442784429,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0.132409180813219,0.573673241497627,0,0,0,1.2333377420858,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0,0,0.494533858557114,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0,0,1.54608682530637,0.545492241181669,0.860413786167011,0,0.132529768321485,0.232387885739037,0.207322110030741,1.00928340350251,0,0,1.28648187638577,0,0,0,0.354920400119532,0.337169380156203,0.482022059766964,0.330881918197182,0.435758888184812,0.237270619111097,0,0.588664395376038,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,0,2.74375713521564,0,0.301586917234893,1.20364978706088,0,1.03993478527958,0,0,0.117408694235822,0.144366447761074,0,0,0,0.858486162094873,0,0,0,0,0.335964256397719,0.283550194484773,0.716468181622786,0.290633938513962,0.766765358330422,0,0.264145302039678,0,0,0.25248486685276,0.63497894292169,4.20187268114105,3.51652341630141,0,0.822619941626588,0.901029173531752,1.14330573052231,0.112131084345361,0.43596006883328,0,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0,0.862510299438069,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0,0.300946099727719,0,1.03473071292505,0,0,0.173767228936166,0,0,0,0.215714200818617,0.106727557803444,2.72814814301633,1.66435439510497,0.604780586659361,0.248107807818777,0.153461973288062,0,0.512556597022804,0,0.160853921143607,0,0,0,0,0,0,1.57117284469109,3.00759705454927,5.43277834721788,0.918515585316854,0.182091168006717,0.131124414959424,0.902399225814824,0.0770153371044148,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0.254876273045038,0.831076008928724,0,0.657779629937804,0.522870902049801,0.256450125116389,0.328014645699706,1.62689197332152,0.206082023295445,0,0,2.29706215198469,0.650060246036521,0,2.12675580242668,0,0,0,0,0,0.0852266274161009,0.267096106940212,7.76839102196597,0.960950336825531,0.510450849978337,1.71968227454435,0,0.94443704049192,0,0,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0.9554993798559,0.424216295861138,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0,0,0.349934720244983,0.384888450902048,0,1.08890984861323,0,2.15252686335615,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0.246169610922139,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0.0927680981618513,0,0.7812832832557,0,0,0,0,0,0,0.291604613383254,0.520874984799877,0,0,0,0.110579259931225,0,0,0.980446171670911,0.975966209950223,0.153900517007594,0.227884111694002,0.69169171316418,3.2312751987518,0.217294743844016,0,0.274792780205587,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,1.05499032264014,0,0.141353071433941,0,0,0.0884575645033392,0,0,0.247127877893006,0,0,0,0,0,0.782658475728359,0.728341138602278,0,0,0.30607276163049,0,0.751617097072463,0,0,0.330991955875499,0,2.38944859545918,0,0.416024019039416,0.173559738335131,0.783939179315021,0.34823682632161,0.17472666824203,0.343972064943233,0.19351266257817,0.292357268344742,0,0.193978032976839,0.264768380074501,0,0.274083849293502,0,0,0,0.0801588202515337,0,0.599428828746391,0,0,0,0.14405479798815,0.49701014226173,1.17847017308398,0,0,0,1.15580235960608,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0,0.321506296930038,0.687697182986169,0.83088067605837,0,0,0.0607495566580247,0.670869375198532,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0.0620964029413835,0.276697269872462,0,1.66814029295813,2.56918800190471,0,0.468334905806882,0,0,0,0,0,0,0,0.457680136793847,0,0.15543720058278,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0.686791410365586,0,0,0.192619830407303,0,1.30497145982606,0,0,1.22368352253234,0.179088841081487,0,0.438568099157414,0.353378291891762,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0,0,0.516644938982447,0.567515953566836,0,0.279759015438889,0,0.127894371303652,0,0,0,0.169732529954025,0,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.63699922809025,0.707818340086442,1.28400018965175,0.924205329202706,0,1.3807198521202,0.596748666348824,0,0,0,0.523813388962845,0.49131575253029,0.295712172434091,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0.222462803784138,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0.347716544605159,0,0,0.17071847709395,0,0,0,0.170426809518315,0,0.4582137370881,0,0,0.111855431797792,0.588901401691458,0,0,0,0,0,0,0.198950775161368,0,0.45178432815584,0,0,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,0,0,0.178553938605658,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.253397002022874,0.101988829741982,0,0,0,0.378893491091197,0,0,0,0,0,0.193766729508018,0,0.112131862580613,0,0,0.435433495793923,0,0,0.143444410785353,0.332660356546013,0.162806537221949,0.426909383510862,0,0.628776414746108,0,0,0,0,0,0 | ||
|short_description=p10@SLC7A5 | |short_description=p10@SLC7A5 | ||
}} | }} |
Latest revision as of 08:19, 18 September 2015
Short description: | p10@SLC7A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SLC7A5_5end |
Coexpression cluster: | NA |
Association with transcript: | -378bp_to_BC114608_5end |
EntrezGene: | SLC7A5 |
HGNC: | 11063 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 3.92e-14 | 3 |
endo-epithelial cell | 3.05e-10 | 42 |
endodermal cell | 3.44e-08 | 58 |
pigment cell | 2.14e-07 | 14 |
light melanocyte | 4.21e-07 | 3 |
melanocyte | 5.81e-07 | 10 |
melanoblast | 5.81e-07 | 10 |
placental epithelial cell | 8.21e-07 | 3 |
epithelial cell | 9.42e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.75e-07 | 99 |
skin epidermis | 4.42e-07 | 15 |
outer epithelium | 4.42e-07 | 15 |
enveloping layer of ectoderm | 4.42e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 7.90e-10 | 2 |