FFCP PHASE1:Hg19::chr10:54339875..54339879,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:54339875..54339879,+
|short_description=p@chr10:54339875..54339879,+
|description=CAGE_peak_at_chr10:54339875..54339879,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:54339875..54339879,+ | |||
|coexpression_cluster_id=C234 | |||
|description=CAGE_peak_at_chr10:54339875..54339879,+ | |||
|id=chr10:54339875..54339879,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.18e-11;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008814;3.18e-11;2!UBERON:0010056;3.18e-11;2 | |||
|ontology_enrichment_disease=DOID:1749!3.43e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.83e-23;14!DOID:3151;1.87e-21;1!DOID:3149;1.87e-21;1!DOID:3451;2.02e-11;2!DOID:4159;2.02e-11;2!DOID:0060122;2.02e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.19e-23,14;DOID:3151,1.88e-21,1;DOID:3149,1.88e-21,1;DOID:3451,2.02e-11,2;DOID:4159,2.02e-11,2;DOID:0060122,2.02e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000344!7.38e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;6.01e-21;4!UBERON:0004785;6.01e-21;4!UBERON:0000974;2.57e-14;6!UBERON:0001723;6.56e-08;3!UBERON:0001033;6.56e-08;3!UBERON:0003729;4.19e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,5.17e-21,4;UBERON:0004785,5.17e-21,4;UBERON:0000974,5.36e-09,10;UBERON:0001723,5.93e-08,3;UBERON:0001033,5.93e-08,3;UBERON:0010056,5.93e-08,3;UBERON:0003729,4.00e-07,13 | |||
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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0.403008392910561,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0.723906533337896,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0,0,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0,0,0,0.709522128141196,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0.311039587661807,0.179736702294654,1.25314822272926,0,0,0,0,0,0,0,0,0,0,1.93448862085349,0,0,0,0,0,0,0,0,0,0,0,0,1.67308493134324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0.216388639742091,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881931576729399,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0.80175617316141,0,0,0,0,0.407712618220842,0.313808538937,0,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34804281319486,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,1.40963004463334,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.491545817507439,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67404485806974,0.353909170043221,0,1.5018336599544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.333694205676207,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401206833445841,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:54339875..54339879,+ | |||
}} | }} |
Latest revision as of 14:10, 23 July 2015
Short description: | p@chr10:54339875..54339879, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:54339875..54339879, + |
Coexpression cluster: | C234_oral_epidermoid_malignant_cervical_ductal_lung_keratoacanthoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 5.17e-21 | 4 |
respiratory system mucosa | 5.17e-21 | 4 |
neck | 5.36e-09 | 10 |
tongue | 5.93e-08 | 3 |
gustatory system | 5.93e-08 | 3 |
future tongue | 5.93e-08 | 3 |
mouth mucosa | 4.00e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.19e-23 | 14 |
skin squamous cell carcinoma | 1.88e-21 | 1 |
keratoacanthoma | 1.88e-21 | 1 |
skin carcinoma | 2.02e-11 | 2 |
skin cancer | 2.02e-11 | 2 |
integumentary system cancer | 2.02e-11 | 2 |