FFCP PHASE1:Mm9::chr9:46051225..46051236,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=191 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:46051225..46051236,+ | |||
|description=CAGE_peak_at_chr9:46051225..46051236,+ | |description=CAGE_peak_at_chr9:46051225..46051236,+ | ||
|id=chr9:46051225..46051236,+ | |id=chr9:46051225..46051236,+ | ||
|ontology_enrichment_celltype=CL:0000239!9.88e-13!6;CL:0000677!9.88e-13!6;CL:0000212!9.88e-13!6;CL:0000584!9.88e-13!6;CL:0000075!8.74e-11!7;CL:0000066!3.21e-08!25;CL:0002563!3.44e-08!9;CL:0002251!3.44e-08!9;CL:0000473!1.83e-07!3;CL:0000627!1.83e-07!3;CL:0000682!1.83e-07!3 | |ontology_enrichment_celltype=CL:0000239!9.88e-13!6;CL:0000677!9.88e-13!6;CL:0000212!9.88e-13!6;CL:0000584!9.88e-13!6;CL:0000075!8.74e-11!7;CL:0000066!3.21e-08!25;CL:0002563!3.44e-08!9;CL:0002251!3.44e-08!9;CL:0000473!1.83e-07!3;CL:0000627!1.83e-07!3;CL:0000682!1.83e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.61e-21,6;CL:0000677,3.61e-21,6;CL:0000584,3.61e-21,6;CL:0000075,4.47e-18,7;CL:0002563,6.02e-14,9;CL:0002251,6.02e-14,9;CL:0000066,6.69e-13,25;CL:0000682,6.31e-12,3;CL:0002076,3.78e-08,15;CL:0000223,5.54e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.55e-22!43;UBERON:0005409!2.30e-17!59;UBERON:0000344!1.26e-15!15;UBERON:0001242!6.84e-12!13;UBERON:0000060!6.84e-12!13;UBERON:0001262!6.84e-12!13;UBERON:0004786!6.84e-12!13;UBERON:0004923!8.92e-09!24;UBERON:0003350!3.44e-08!9;UBERON:0004808!3.44e-08!9;UBERON:0001277!3.44e-08!9;UBERON:0001007!3.70e-08!128;UBERON:0001555!3.70e-08!128;UBERON:0007026!3.70e-08!128;UBERON:0004119!6.43e-08!130;UBERON:0000925!6.43e-08!130;UBERON:0006595!6.43e-08!130 | |ontology_enrichment_uberon=UBERON:0000160!2.55e-22!43;UBERON:0005409!2.30e-17!59;UBERON:0000344!1.26e-15!15;UBERON:0001242!6.84e-12!13;UBERON:0000060!6.84e-12!13;UBERON:0001262!6.84e-12!13;UBERON:0004786!6.84e-12!13;UBERON:0004923!8.92e-09!24;UBERON:0003350!3.44e-08!9;UBERON:0004808!3.44e-08!9;UBERON:0001277!3.44e-08!9;UBERON:0001007!3.70e-08!128;UBERON:0001555!3.70e-08!128;UBERON:0007026!3.70e-08!128;UBERON:0004119!6.43e-08!130;UBERON:0000925!6.43e-08!130;UBERON:0006595!6.43e-08!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.78e-38,31;UBERON:0005409,7.07e-24,47;UBERON:0000344,6.52e-23,15;UBERON:0001242,1.22e-16,13;UBERON:0001262,1.22e-16,13;UBERON:0004786,1.22e-16,13;UBERON:0003350,6.02e-14,9;UBERON:0004808,6.02e-14,9;UBERON:0001277,6.02e-14,9;UBERON:0004923,1.11e-13,24;UBERON:0000485,2.58e-11,11;UBERON:0001007,3.31e-11,116;UBERON:0001555,3.31e-11,116;UBERON:0007026,3.31e-11,116;UBERON:0004119,5.99e-11,118;UBERON:0000925,5.99e-11,118;UBERON:0006595,5.99e-11,118;UBERON:0001962,4.93e-09,2;UBERON:0001961,4.93e-09,2;UBERON:0001744,4.93e-09,2;UBERON:0004921,7.56e-09,114 | |||
|phase1_expression=0,4.88565570695105,11.8299802241279,1.81478526784098,4.00716583957078,1.17515490338323,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5593104742,15.8292403936347,6.89078356938024,2.15380998079537,4.95583835177545,0.760093677825496,0,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03991400112325,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,1.58670339998127,0,0,0,0.201683524623343,1.11189021922435,1.33157938278791,2.84717436926707,5.59976446061637,4.52403375840485,4.37704238490532,1.75467678407208,5.39291645192533,0.648414149624083,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549122826376163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0.237270036248348,0,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,4.88565570695105,11.8299802241279,1.81478526784098,4.00716583957078,1.17515490338323,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5593104742,15.8292403936347,6.89078356938024,2.15380998079537,4.95583835177545,0.760093677825496,0,2.43903561720835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03991400112325,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,1.58670339998127,0,0,0,0.201683524623343,1.11189021922435,1.33157938278791,2.84717436926707,5.59976446061637,4.52403375840485,4.37704238490532,1.75467678407208,5.39291645192533,0.648414149624083,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549122826376163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0.237270036248348,0,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr9:46051225..46051236,+ | |short_description=p@chr9:46051225..46051236,+ | ||
}} | }} |
Latest revision as of 05:43, 5 August 2015
Short description: | p@chr9:46051225..46051236, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46051225..46051236, + |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.61e-21 | 6 |
gut absorptive cell | 3.61e-21 | 6 |
enterocyte | 3.61e-21 | 6 |
columnar/cuboidal epithelial cell | 4.47e-18 | 7 |
intestinal epithelial cell | 6.02e-14 | 9 |
epithelial cell of alimentary canal | 6.02e-14 | 9 |
epithelial cell | 6.69e-13 | 25 |
M cell of gut | 6.31e-12 | 3 |
endo-epithelial cell | 3.78e-08 | 15 |
endodermal cell | 5.54e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.78e-38 | 31 |
gastrointestinal system | 7.07e-24 | 47 |
mucosa | 6.52e-23 | 15 |
intestinal mucosa | 1.22e-16 | 13 |
wall of intestine | 1.22e-16 | 13 |
gastrointestinal system mucosa | 1.22e-16 | 13 |
epithelium of mucosa | 6.02e-14 | 9 |
gastrointestinal system epithelium | 6.02e-14 | 9 |
intestinal epithelium | 6.02e-14 | 9 |
organ component layer | 1.11e-13 | 24 |
simple columnar epithelium | 2.58e-11 | 11 |
digestive system | 3.31e-11 | 116 |
digestive tract | 3.31e-11 | 116 |
primitive gut | 3.31e-11 | 116 |
endoderm-derived structure | 5.99e-11 | 118 |
endoderm | 5.99e-11 | 118 |
presumptive endoderm | 5.99e-11 | 118 |
gut-associated lymphoid tissue | 4.93e-09 | 2 |
mucosa-associated lymphoid tissue | 4.93e-09 | 2 |
lymphoid tissue | 4.93e-09 | 2 |
subdivision of digestive tract | 7.56e-09 | 114 |