FFCP PHASE1:Hg19::chr17:20059346..20059355,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92521 | |EntrezGene=92521 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30615 | |HGNC=30615 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000467722_5end | |association_with_transcript=28bp_to_ENST00000467722_5end | ||
|cluster_id=chr17:20059346..20059355,+ | |||
|coexpression_cluster_id=C3613 | |||
|description=CAGE_peak_5_at_SPECC1_5end | |description=CAGE_peak_5_at_SPECC1_5end | ||
|id=chr17:20059346..20059355,+ | |id=chr17:20059346..20059355,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.19e-13!254 | |ontology_enrichment_celltype=CL:0000066!2.19e-13!254 | ||
|ontology_enrichment_celltype_v019=CL:0000077;9.47e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.47e-13,253;CL:0000077,5.99e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.43e-12!106;DOID:0050687!1.85e-10!143;DOID:162!3.63e-09!235;DOID:14566!4.40e-09!239;DOID:193!9.84e-07!29 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.56e-09,106;DOID:162,2.34e-08,235;DOID:0050687,8.74e-08,143;DOID:14566,9.16e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.88e-13!86;UBERON:0001017!5.63e-13!82;UBERON:0000073!3.00e-12!94;UBERON:0001016!3.00e-12!94;UBERON:0004121!9.60e-11!169;UBERON:0000064!1.93e-10!219;UBERON:0000924!4.51e-10!173;UBERON:0006601!4.51e-10!173;UBERON:0000955!1.83e-09!69;UBERON:0006238!1.83e-09!69;UBERON:0001049!6.23e-09!57;UBERON:0005068!6.23e-09!57;UBERON:0006241!6.23e-09!57;UBERON:0007135!6.23e-09!57;UBERON:0003075!6.85e-09!86;UBERON:0007284!6.85e-09!86;UBERON:0000033!1.72e-08!123;UBERON:0002346!5.21e-08!90;UBERON:0002616!6.15e-08!59;UBERON:0001737!6.47e-08!9;UBERON:0000153!1.39e-07!129;UBERON:0007811!1.39e-07!129;UBERON:0002780!7.01e-07!41;UBERON:0001890!7.01e-07!41;UBERON:0006240!7.01e-07!41;UBERON:0001893!7.35e-07!34;UBERON:0003056!7.71e-07!61;UBERON:0002020!8.47e-07!34;UBERON:0003528!8.47e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.65e-12;9!UBERON:0001557;4.65e-12;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.27e-12,9;UBERON:0001017,3.29e-08,81;UBERON:0001016,4.35e-07,89 | |||
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|phase1_expression=0.726713517082227,0.642301571672949,0.563817616383885,1.0007329835313,0.893922188854576,0,0,0,0,1.22866968250754,0,0.655324116390517,2.11013582582763,0,0,0,0,0,0.487932798790507,1.10808952269109,1.02000345622126,0,1.43117993565528,0.684372125364421,1.75759695432724,1.83392173795083,0.903106483949403,1.25937250101887,0,0,0.154816123316076,0,2.10844143144775,1.84877005083394,0.0774672005803016,0,0,0.553995408531877,0,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0.639337125799041,0,0.398927315243264,0,0.290209238628584,0,0.622822248995575,0,0,0,1.21079900526674,0,0,0,0.212604299965044,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0.954053754535364,0.569212969109448,1.17447437874188,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,2.43806866313962,0,0.511450247374121,0.361439152384566,0,0.579386075843295,7.95285947051099,1.45990461090791,1.13441780596881,1.33037638477538,1.14185221401064,0.916853528483988,1.45718115317017,0.741568885568859,0.649094787309367,1.74129737299267,1.19662164466979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,0,0,0.436094052142534,1.49091585508596,0.379891534993739,0.529636723252875,0.286836620748814,0.354668382198357,0.560677600142307,0,0.98667019366864,0.311211035399766,0.404132016209064,0.163461903113459,0.302714855289863,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0.438977620880838,1.22595118319608,0.300476117813194,0.226864366320042,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0,0,0.18611685633159,0.506328996723799,0.68205903612839,0,0.184099797284599,0,0.355009592516614,0.604512589365842,0,1.73934767846967,2.45471508531751,2.00763216772303,0.609868530647977,0.927708378250397,1.39432731443422,0.621966330092223,1.51392510525377,1.82488679537915,0,0,0,0,0,5.91534000199219,7.75489574359268,6.50729780685401,6.94852028214082,6.972142210957,6.16903609688851,4.85392709376592,6.47530834913642,5.38646019724947,0,0,0.4115740113314,0,0,0,0,0,0.614942192715568,1.02940686179115,1.86575485194663,0,0.201057944823262,1.11106134190236,0,0,0,1.04337364477569,2.23076519048061,0.144366447761074,0,0,0,0.858486162094873,0,3.27605971194933,1.63494278517601,2.81201501960331,2.01578553838631,1.55952606966625,0.895585227028483,0.871901815541886,1.53353071666084,0,0.616339038092582,0,0,0,1.07946420296687,1.14596527667483,0,0,0.308482478109971,0.600686115687835,0.571652865261156,0.224262168690721,0.43596006883328,0.2933531432838,1.93907573636667,0,0,4.25500986535793,2.08014873822732,0,0,0,0.285955987316295,0,1.64648067356154,0,0.355391948742546,1.58390374586686,2.1100756394171,0,2.0994328148232,1.2162378064119,0.502257091432126,0,0.479249710983165,0,2.85273810081437,0.144781306667579,0,0.716243852959582,0,0,0,0,3.55732473911449,2.60279707715243,0.773288812777695,1.34013012267479,1.91381625495949,0,0,0,0.12269149171914,0,0,0.831883446123229,0.178428988797162,0.630809660135739,0.585707074963566,0,0,1.03473071292505,1.99267679560631,1.29058417979192,0.0868836144680828,0,0,0,0,0,0.909382714338778,0,0.30239029332968,1.24053903909388,3.52962538562544,1.68396056659844,0.640695746278505,1.02341449813341,1.93024705372329,0,0.308419387605311,0.532685175939381,0.574890092096664,1.03850885836724,0.581051892299796,1.0877350463246,2.40607764363942,0.828728900423067,0.34444334449382,0.182091168006717,0.393373244878272,2.25599806453706,0.693138033939733,0.784349769176855,0,1.37217117560738,0,0,0.647747748306418,0,2.98041081298238,1.50506932156456,1.78413391131527,0.831076008928724,0.671624264166535,0.438519753291869,0.522870902049801,0.769350375349168,6.56029291399411,1.62689197332152,0,0.366277859273374,0.41254749960294,1.72279661398852,1.95018073810956,0,0.193341436584244,0,0.15350367472613,0.137836572484531,0.644521469209642,0.145016693914229,0.596586391912706,0.801288320820636,0.826424576804891,3.2672311452068,3.06270509987002,1.51736671283325,0,0.62962469366128,1.3940745403212,0.616067160352178,0,0,0.18532421910392,1.00187420719394,0.372158369359667,0.316379424718726,0.762520775695299,0,0,0.318203247925937,0,0.899362287916574,0.54907405947211,0.589062011728432,0.202182481573316,0,0.842516912477962,0.48763373908959,0.487426979262569,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.717056761020258,0.687743287091848,1.07001315444375,0.354761064070598,0.422215270595328,0.987884678879706,0,0,2.11688647996127,0.670302275535787,0,0.0941438007767792,2.15252686335615,0,1.33029046061003,0.459446800413919,0,0,0,0,0.411362273086194,0,0,0,0,0,1.71528151186722,0,0,0,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,2.50565556505718,2.46174797895425,0,0,0,0.561421621224659,0.293016358543788,0.121360521749513,0,0.284136146806413,0.71623345421307,0.5939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| ||
|short_description=p5@SPECC1 | |short_description=p5@SPECC1 | ||
}} | }} |
Latest revision as of 01:06, 19 September 2015
Short description: | p5@SPECC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SPECC1_5end |
Coexpression cluster: | C3613_optic_Hep2_corpus_lens_Mesenchymal_globus_Chondrocyte |
Association with transcript: | 28bp_to_ENST00000467722_5end |
EntrezGene: | SPECC1 |
HGNC: | 30615 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.47e-13 | 253 |
mesothelial cell | 5.99e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.27e-12 | 9 |
central nervous system | 3.29e-08 | 81 |
nervous system | 4.35e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.56e-09 | 106 |
cancer | 2.34e-08 | 235 |
cell type cancer | 8.74e-08 | 143 |
disease of cellular proliferation | 9.16e-08 | 239 |