FFCP PHASE1:Hg19::chr12:105630020..105630031,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55198 | |EntrezGene=55198 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18242 | |HGNC=18242 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NEU8 | |UniProt=Q8NEU8 | ||
|association_with_transcript=-4bp_to_ENST00000258530_5end | |association_with_transcript=-4bp_to_ENST00000258530_5end | ||
|cluster_id=chr12:105630020..105630031,- | |||
|description=CAGE_peak_4_at_APPL2_5end | |description=CAGE_peak_4_at_APPL2_5end | ||
|id=chr12:105630020..105630031,- | |id=chr12:105630020..105630031,- | ||
|ontology_enrichment_celltype=CL:0000542!4.76e-09!53;CL:0000051!4.76e-09!53;CL:0000838!8.71e-09!52 | |ontology_enrichment_celltype=CL:0000542!4.76e-09!53;CL:0000051!4.76e-09!53;CL:0000838!8.71e-09!52 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.69e-08;18!CL:0000789;5.69e-08;18!CL:0002419;5.69e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.70e-08,18;CL:0000789,2.70e-08,18;CL:0002420,2.70e-08,18;CL:0002419,2.70e-08,18;CL:0000790,2.70e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000790;5.69e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.60e-08!32;UBERON:0002619!3.40e-08!22;UBERON:0001893!3.94e-08!34;UBERON:0002020!4.59e-08!34;UBERON:0003528!4.59e-08!34;UBERON:0002791!6.36e-08!33;UBERON:0000073!1.31e-07!94;UBERON:0001016!1.31e-07!94;UBERON:0001950!3.45e-07!20 | |ontology_enrichment_uberon=UBERON:0001869!1.60e-08!32;UBERON:0002619!3.40e-08!22;UBERON:0001893!3.94e-08!34;UBERON:0002020!4.59e-08!34;UBERON:0003528!4.59e-08!34;UBERON:0002791!6.36e-08!33;UBERON:0000073!1.31e-07!94;UBERON:0001016!1.31e-07!94;UBERON:0001950!3.45e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.07e-08;22!UBERON:0002791;6.92e-08;32!UBERON:0001869;7.57e-08;32!UBERON:0000956;2.31e-07;25!UBERON:0000203;2.31e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002791,2.39e-08,32;UBERON:0001869,2.39e-08,32;UBERON:0002619,2.44e-08,22;UBERON:0003528,1.16e-07,34;UBERON:0002020,1.16e-07,34;UBERON:0001893,1.16e-07,34;UBERON:0000956,4.66e-07,25;UBERON:0000203,4.66e-07,25 | |||
|phase1_expression=1.09007027562334,0.214100523890983,0.422863212287913,1.0007329835313,0,0,0,1.26343974685366,0.261185628199839,0.245733936501509,0,0.436882744260345,0.263766978228454,0,0,1.34465029290355,0,0,0.975865597581014,0.61560529038394,0,0,0,0,0,0.229240217243854,0.57470412614962,0.393553906568396,0.786728553697808,1.15148819429164,0.77408061658038,0,0.30120591877825,1.10926203050036,0.92960640696362,0.142169232487422,0.587200878669695,0.553995408531877,0.601633342410425,0.434021741431704,0.447830948479849,0.647787332037959,0.257575567634187,0.290796477559129,0,0,0.464858073811369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0.422510572623884,0.212604299965044,0.209658645508376,0.22465726229299,0,0.16072558669708,1.42506371870624,0,0.182664153764634,1.75996244461323,0.546138611262131,0.889509253863555,0.853460445133014,0.400395987036012,0.574752439954483,1.32208974556972,0.954053754535364,0.569212969109448,2.93618594685469,0.764546456250458,0,0.560508562981536,1.05353633910031,1.180258620683,1.96505381374582,0.616804496998528,1.83905144929746,0.977766799900771,1.4203434172042,1.94826728407911,1.44833593950726,1.17842362989935,1.55073726208535,0.812411591295047,2.5618263945135,2.34106825607781,1.97325485524411,1.10540007114339,1.44901542867526,1.63115219478266,1.33770414044857,1.04535523804977,2.03956816855619,2.68254345521345,1.37450978193052,0.253019692019503,1.59282707162048,1.30216690771284,1.90090408889675,0.451725357233318,0.511946444617674,0,0,0.821127996921047,1.61285394579786,2.13952156626806,2.17236605824198,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.527008714158756,0.458426764241994,0,0,0,0.696518949197069,0.132957960518865,1.66943437013739,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.662045904066094,0,0.354668382198357,0,1.06748995729705,0,0,0,0.163461903113459,1.05950199351452,0,0.70296429550139,0.312160076830321,0.570471821544449,0.448346041655403,0.587172493218824,1.29498355494505,1.54495887372473,0.204154171254893,0,0,0,0.494533858557114,0,0,0.673344455816265,0.625592599359821,0,0,0.919463387397059,0.150238058906597,0.113432183160021,0.358779271377724,0,0,0.600182192168805,0.309157587715317,0.515281080091258,0.18611685633159,0.168776332241266,0.0974370051611986,1.26216887122057,0.828449087780694,0.323292113637624,0.710019185033229,0.503760491138201,0.169560592310488,0.386521706326594,0.272746120590835,0.573609190778008,0.365921118388786,0.397589304964456,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0.928735856063958,0.721879481669586,0.118306800039844,0.337169380156203,0.241011029883482,0,0,0.474541238222193,0.134831308160164,0,0.769494313892781,0,0,0.8231480226628,0,0,0,0,2.20731549707325,0.122988438543114,0.343135620597051,0.439001141634502,0,1.20634766893957,0.555530670951178,0,0,0,0.231860809950154,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0.358234090811393,0.871901815541886,0.766765358330422,0,0.088048434013226,0.414656231081544,0.144119953416961,0.12624243342638,0.380987365753014,0.763976851116555,0,0,0.411309970813294,0,0.571652865261156,0.224262168690721,0.43596006883328,0.22001485746285,0.258543431515556,0,0,0,0,0.514414748524284,0,0.799266537048298,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0.602878754119172,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0.144781306667579,0.205476322550383,0.179060963239896,0.448340575974109,0.985153801009636,1.50939302401662,1.02674429023799,0,1.30139853857622,0,1.00509759200609,2.55175500661265,1.49801404789436,0,0.414415513436035,0,0.500170521059677,0,1.66376689224646,0.356857977594324,0.315404830067869,0.702848489956279,0.300946099727719,0,1.03473071292505,0.664225598535437,0.184369168541703,0.695068915744663,0.195801157462741,0.343143423810856,0.620304078368662,0.431428401637234,0.640365346820666,0.303127571446259,0,0,1.24053903909388,0.767309866440312,0.280660094433074,0.384417447767103,0,0.804269605718038,0,0,0.710246901252508,0.328508624055237,0,0.697262270759755,0.362578348774867,0.200506470303285,0.368323955743585,0.229628896329213,0.182091168006717,0,0.451199612907412,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0.223874754722178,1.31555925987561,1.3071772551245,0.256450125116389,0.328014645699706,0.325378394664303,0.206082023295445,0.54941678891006,0,0.574265537996172,0,0,0.096670718292122,0,0,0.827019434907183,1.28904293841928,0,0.170453254832202,0.623224249527161,0.330569830721956,0,0.510450849978337,0.30347334256665,0.464845549297286,0.62962469366128,0,0.308033580176089,0,0,0.37064843820784,0,0.372158369359667,0,0.190630193923825,0,0,0.95460974377781,1.56989728039846,0.179872457583315,0,0.235624804691373,0,0,1.68503382495592,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.563391205064483,0.143411352204052,0,0.35667105148125,0.709522128141196,0.422215270595328,0.329294892959902,0,0,0.673554789078584,0,0,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| ||
|short_description=p4@APPL2 | |short_description=p4@APPL2 | ||
}} | }} |
Latest revision as of 01:25, 16 September 2015
Short description: | p4@APPL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_APPL2_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000258530_5end |
EntrezGene: | APPL2 |
HGNC: | 18242 |
UniProt: | Q8NEU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.70e-08 | 18 |
alpha-beta T cell | 2.70e-08 | 18 |
immature T cell | 2.70e-08 | 18 |
mature T cell | 2.70e-08 | 18 |
immature alpha-beta T cell | 2.70e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
regional part of telencephalon | 2.39e-08 | 32 |
cerebral hemisphere | 2.39e-08 | 32 |
regional part of cerebral cortex | 2.44e-08 | 22 |
brain grey matter | 1.16e-07 | 34 |
gray matter | 1.16e-07 | 34 |
telencephalon | 1.16e-07 | 34 |
cerebral cortex | 4.66e-07 | 25 |
pallium | 4.66e-07 | 25 |