FFCP PHASE1:Hg19::chr12:112451000..112451011,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89894 | |EntrezGene=89894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25084 | |HGNC=25084 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BWF8,G3V1W7,Q8NCL8 | |UniProt=Q9BWF8,G3V1W7,Q8NCL8 | ||
|association_with_transcript=11bp_to_,-11bp_to_NM_001193453,NM_001193531,NM_138341,uc001ttj.1_5end | |association_with_transcript=11bp_to_,-11bp_to_NM_001193453,NM_001193531,NM_138341,uc001ttj.1_5end | ||
|cluster_id=chr12:112451000..112451011,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_7_at_TMEM116_5end | |description=CAGE_peak_7_at_TMEM116_5end | ||
|id=chr12:112451000..112451011,- | |id=chr12:112451000..112451011,- | ||
|ontology_enrichment_celltype=CL:0002242!6.59e-07!1;CL:0000228!6.59e-07!1;CL:0002372!6.59e-07!1 | |ontology_enrichment_celltype=CL:0002242!6.59e-07!1;CL:0000228!6.59e-07!1;CL:0002372!6.59e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000228;5.12e-50;1!CL:0002372;5.12e-50;1!CL:0000056;1.21e-13;4!CL:0000737;1.21e-13;4!CL:0000680;2.26e-08;7!CL:0000188;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,6.58e-50,1;CL:0002372,6.58e-50,1;CL:0000737,1.29e-13,4;CL:0000515,1.29e-13,4;CL:0000188,8.85e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10!CL:0000515;1.21e-13;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!9.35e-07!8 | |ontology_enrichment_uberon=UBERON:0000473!9.35e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22 | |||
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|short_description=p7@TMEM116 | |short_description=p7@TMEM116 | ||
}} | }} |
Latest revision as of 10:36, 16 September 2015
Short description: | p7@TMEM116 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TMEM116_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 11bp_to_, -11bp_to_NM_001193453, NM_001193531, NM_138341, uc001ttj.1_5end |
EntrezGene: | TMEM116 |
HGNC: | 25084 |
UniProt: | Q9BWF8G3V1W7Q8NCL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 6.58e-50 | 1 |
myotube | 6.58e-50 | 1 |
striated muscle cell | 1.29e-13 | 4 |
skeletal muscle myoblast | 1.29e-13 | 4 |
cell of skeletal muscle | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |