FFCP PHASE1:Hg19::chr12:120724678..120724691,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:120724678..120724691,- | |||
|coexpression_cluster_id=C3105 | |||
|description=CAGE_peak_at_chr12:120724678..120724691,- | |description=CAGE_peak_at_chr12:120724678..120724691,- | ||
|id=chr12:120724678..120724691,- | |id=chr12:120724678..120724691,- | ||
|ontology_enrichment_celltype=CL:0000039!3.98e-29!7;CL:0000586!3.98e-29!7;CL:0002541!3.45e-26!3;CL:0000349!1.23e-25!3;CL:0002577!1.23e-25!3;CL:0002537!3.47e-16!5;CL:0000083!3.44e-09!4 | |ontology_enrichment_celltype=CL:0000039!3.98e-29!7;CL:0000586!3.98e-29!7;CL:0002541!3.45e-26!3;CL:0000349!1.23e-25!3;CL:0002577!1.23e-25!3;CL:0002537!3.47e-16!5;CL:0000083!3.44e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000349;5.80e-47;19!CL:0002541;4.55e-43;3!CL:0002537;1.66e-26;5!CL:0002577;1.33e-19;3!CL:0000134;7.96e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.97e-47,19;CL:0002541,5.25e-43,3;CL:0002537,1.66e-26,5;CL:0002577,1.27e-19,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.56e-16;1 | |||
|ontology_enrichment_disease=DOID:1799!8.17e-10!1;DOID:10165!8.17e-10!1;DOID:1798!8.17e-10!1;DOID:3095!3.33e-09!22;DOID:2994!3.33e-09!22;DOID:1793!3.44e-09!4 | |ontology_enrichment_disease=DOID:1799!8.17e-10!1;DOID:10165!8.17e-10!1;DOID:1798!8.17e-10!1;DOID:3095!3.33e-09!22;DOID:2994!3.33e-09!22;DOID:1793!3.44e-09!4 | ||
|ontology_enrichment_disease_v019=DOID:1799;1.92e-15;1!DOID:10165;1.92e-15;1!DOID:1798;1.92e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.06e-15,1;DOID:10165,2.06e-15,1;DOID:1798,2.06e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.52e-71!14;UBERON:0000158!3.52e-71!14;UBERON:0003124!2.16e-58!7;UBERON:0000478!7.84e-41!24;UBERON:0001987!5.36e-34!4;UBERON:0004340!5.36e-34!4;UBERON:0000476!3.45e-26!3;UBERON:0000920!3.45e-26!3;UBERON:0000305!1.09e-19!7;UBERON:0004871!2.94e-17!8;UBERON:0004923!3.61e-16!57 | |ontology_enrichment_uberon=UBERON:0005631!3.52e-71!14;UBERON:0000158!3.52e-71!14;UBERON:0003124!2.16e-58!7;UBERON:0000478!7.84e-41!24;UBERON:0001987!5.36e-34!4;UBERON:0004340!5.36e-34!4;UBERON:0000476!3.45e-26!3;UBERON:0000920!3.45e-26!3;UBERON:0000305!1.09e-19!7;UBERON:0004871!2.94e-17!8;UBERON:0004923!3.61e-16!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.79e-51;10!UBERON:0000158;5.79e-51;10!UBERON:0000478;5.01e-47;24!UBERON:0003124;4.55e-43;3!UBERON:0000920;4.55e-43;3!UBERON:0001987;1.92e-32;4!UBERON:0000305;3.86e-19;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.34e-81,14;UBERON:0000158,5.34e-81,14;UBERON:0003124,3.42e-72,7;UBERON:0000478,5.15e-47,24;UBERON:0000920,5.25e-43,3;UBERON:0001987,1.82e-32,4;UBERON:0004340,1.82e-32,4;UBERON:0000305,3.86e-19,7;UBERON:0004871,7.83e-17,8;UBERON:0004923,1.27e-16,66 | |||
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|short_description=p@chr12:120724678..120724691,- | |short_description=p@chr12:120724678..120724691,- | ||
}} | }} |
Latest revision as of 05:44, 24 July 2015
Short description: | p@chr12:120724678..120724691, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:120724678..120724691, - |
Coexpression cluster: | C3105_placenta_amniotic_chorionic_Placental_epidermoid_gall_Amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.97e-47 | 19 |
chorionic membrane mesenchymal stem cell | 5.25e-43 | 3 |
amnion mesenchymal stem cell | 1.66e-26 | 5 |
placental epithelial cell | 1.27e-19 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.34e-81 | 14 |
membranous layer | 5.34e-81 | 14 |
chorion | 3.42e-72 | 7 |
extraembryonic structure | 5.15e-47 | 24 |
egg chorion | 5.25e-43 | 3 |
placenta | 1.82e-32 | 4 |
allantois | 1.82e-32 | 4 |
amnion | 3.86e-19 | 7 |
somatic layer of lateral plate mesoderm | 7.83e-17 | 8 |
organ component layer | 1.27e-16 | 66 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.06e-15 | 1 |
endocrine pancreas cancer | 2.06e-15 | 1 |
pancreatic endocrine carcinoma | 2.06e-15 | 1 |