FFCP PHASE1:Hg19::chr17:39659278..39659313,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3860 | |EntrezGene=3860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6415 | |HGNC=6415 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-266bp_to_ENST00000464634_5end | |association_with_transcript=-266bp_to_ENST00000464634_5end | ||
|cluster_id=chr17:39659278..39659313,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_4_at_KRT13_5end | |description=CAGE_peak_4_at_KRT13_5end | ||
|id=chr17:39659278..39659313,- | |id=chr17:39659278..39659313,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.44e-16;1!UBERON:0000358;1.92e-15;1!UBERON:0004874;2.95e-15;1!UBERON:0008814;1.20e-08;2!UBERON:0010056;1.20e-08;2 | |||
|ontology_enrichment_disease=DOID:3151!1.27e-08!1;DOID:3149!1.27e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.95e-15;1!DOID:3149;2.95e-15;1!DOID:3451;2.77e-08;2!DOID:4159;2.77e-08;2!DOID:0060122;2.77e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.75e-15,1;DOID:3149,2.75e-15,1;DOID:3451,2.67e-08,2;DOID:4159,2.67e-08,2;DOID:0060122,2.67e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0006562!2.72e-16!11;UBERON:0000341!1.45e-15!2;UBERON:0003127!2.59e-15!2;UBERON:0001042!6.33e-12!10;UBERON:0009145!6.33e-12!10;UBERON:0000974!1.55e-11!10;UBERON:0001723!4.82e-11!3;UBERON:0001033!4.82e-11!3;UBERON:0010056!4.82e-11!3;UBERON:0000161!3.20e-09!35;UBERON:0002372!8.78e-09!1;UBERON:0001961!8.78e-09!1;UBERON:0001744!8.78e-09!1;UBERON:0001735!8.78e-09!1;UBERON:0000989!1.18e-08!1;UBERON:0008811!1.18e-08!1;UBERON:0006258!1.18e-08!1;UBERON:0005876!1.18e-08!1;UBERON:0004874!1.18e-08!1;UBERON:0000166!1.63e-08!21;UBERON:0000997!2.13e-08!1;UBERON:0005056!2.13e-08!1;UBERON:0006834!2.84e-08!1;UBERON:0005795!4.06e-08!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.74e-20;3!UBERON:0001033;2.74e-20;3!UBERON:0005795;8.63e-16;1!UBERON:0002372;1.34e-15;1!UBERON:0001961;1.34e-15;1!UBERON:0001744;1.34e-15;1!UBERON:0001042;1.34e-15;1!UBERON:0001735;1.34e-15;1!UBERON:0000989;2.95e-15;1!UBERON:0008811;2.95e-15;1!UBERON:0000002;1.81e-10;6!UBERON:0001560;1.81e-10;6!UBERON:0000341;1.39e-08;2!UBERON:0006562;1.86e-08;2!UBERON:0003127;2.77e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.74e-20,3;UBERON:0001033,2.74e-20,3;UBERON:0010056,2.74e-20,3;UBERON:0002372,1.34e-15,1;UBERON:0001961,1.34e-15,1;UBERON:0001744,1.34e-15,1;UBERON:0001735,1.34e-15,1;UBERON:0000989,2.38e-15,1;UBERON:0008811,2.38e-15,1;UBERON:0006258,2.38e-15,1;UBERON:0005876,2.38e-15,1;UBERON:0004874,2.38e-15,1;UBERON:0001042,1.35e-13,10;UBERON:0009145,1.35e-13,10;UBERON:0006562,2.05e-12,11;UBERON:0000002,1.81e-10,6;UBERON:0001560,1.81e-10,6;UBERON:0000341,1.39e-08,2;UBERON:0003127,2.87e-08,2;UBERON:0001557,2.04e-07,19 | |||
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|short_description=p4@KRT13 | |short_description=p4@KRT13 | ||
}} | }} |
Latest revision as of 05:27, 20 September 2015
Short description: | p4@KRT13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KRT13_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -266bp_to_ENST00000464634_5end |
EntrezGene: | KRT13 |
HGNC: | 6415 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 2.74e-20 | 3 |
gustatory system | 2.74e-20 | 3 |
future tongue | 2.74e-20 | 3 |
tonsil | 1.34e-15 | 1 |
mucosa-associated lymphoid tissue | 1.34e-15 | 1 |
lymphoid tissue | 1.34e-15 | 1 |
tonsillar ring | 1.34e-15 | 1 |
penis | 2.38e-15 | 1 |
intromittent organ | 2.38e-15 | 1 |
lateral plate mesenchyme | 2.38e-15 | 1 |
undifferentiated genital tubercle | 2.38e-15 | 1 |
somatopleure | 2.38e-15 | 1 |
chordate pharynx | 1.35e-13 | 10 |
pharyngeal region of foregut | 1.35e-13 | 10 |
pharynx | 2.05e-12 | 11 |
uterine cervix | 1.81e-10 | 6 |
neck of organ | 1.81e-10 | 6 |
throat | 1.39e-08 | 2 |
open tracheal system trachea | 2.87e-08 | 2 |
upper respiratory tract | 2.04e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.75e-15 | 1 |
keratoacanthoma | 2.75e-15 | 1 |
skin carcinoma | 2.67e-08 | 2 |
skin cancer | 2.67e-08 | 2 |
integumentary system cancer | 2.67e-08 | 2 |