FFCP PHASE1:Hg19::chr17:46189383..46189391,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29916 | |EntrezGene=29916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14975 | |HGNC=14975 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5W9 | |UniProt=Q9Y5W9 | ||
|association_with_transcript=-14bp_to_BT006723,CU674392_5end | |association_with_transcript=-14bp_to_BT006723,CU674392_5end | ||
|cluster_id=chr17:46189383..46189391,+ | |||
|coexpression_cluster_id=C342 | |||
|description=CAGE_peak_6_at_SNX11_5end | |description=CAGE_peak_6_at_SNX11_5end | ||
|id=chr17:46189383..46189391,+ | |id=chr17:46189383..46189391,+ | ||
|ontology_enrichment_celltype=CL:0000945!1.62e-26!24;CL:0000826!1.62e-26!24;CL:0000838!2.24e-18!52;CL:0000542!5.68e-18!53;CL:0000051!5.68e-18!53;CL:0000990!9.56e-15!8;CL:0000451!4.98e-12!10;CL:0000738!2.19e-11!140;CL:0000988!4.46e-11!182;CL:0000453!2.99e-10!5;CL:0002031!3.04e-09!124;CL:0002032!5.02e-09!165;CL:0000837!5.02e-09!165;CL:0000080!6.56e-09!6;CL:0002087!1.59e-08!119;CL:0000037!1.73e-08!172;CL:0000566!1.73e-08!172;CL:0000946!4.69e-07!1;CL:0000786!4.69e-07!1;CL:0000980!4.69e-07!1 | |ontology_enrichment_celltype=CL:0000945!1.62e-26!24;CL:0000826!1.62e-26!24;CL:0000838!2.24e-18!52;CL:0000542!5.68e-18!53;CL:0000051!5.68e-18!53;CL:0000990!9.56e-15!8;CL:0000451!4.98e-12!10;CL:0000738!2.19e-11!140;CL:0000988!4.46e-11!182;CL:0000453!2.99e-10!5;CL:0002031!3.04e-09!124;CL:0002032!5.02e-09!165;CL:0000837!5.02e-09!165;CL:0000080!6.56e-09!6;CL:0002087!1.59e-08!119;CL:0000037!1.73e-08!172;CL:0000566!1.73e-08!172;CL:0000946!4.69e-07!1;CL:0000786!4.69e-07!1;CL:0000980!4.69e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000945;7.52e-33;24!CL:0000946;4.10e-23;1!CL:0000786;4.10e-23;1!CL:0000542;2.16e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.65e-33,24;CL:0000826,8.65e-33,24;CL:0000838,8.50e-27,52;CL:0000542,2.73e-26,53;CL:0000051,2.73e-26,53;CL:0000946,6.40e-23,1;CL:0000786,6.40e-23,1;CL:0000980,6.40e-23,1;CL:0000785,3.62e-12,2;CL:0000955,3.62e-12,2;CL:0000818,3.62e-12,2;CL:0000954,3.62e-12,2;CL:0000816,3.62e-12,2;CL:0002087,6.12e-12,115;CL:0002031,1.95e-11,120;CL:0000738,4.52e-10,136;CL:0000817,1.51e-08,3;CL:0002032,1.80e-08,161;CL:0000837,1.80e-08,161;CL:0000037,4.16e-08,168;CL:0000988,1.11e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;2.16e-12;53!CL:0000954;2.90e-12;2 | |||
|ontology_enrichment_disease=DOID:0060058!3.06e-14!10;DOID:630!2.95e-07!1;DOID:0050177!2.95e-07!1;DOID:0050427!2.95e-07!1;DOID:0060060!3.32e-07!1;DOID:0060061!3.32e-07!1;DOID:8691!3.32e-07!1;DOID:2355!8.27e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.25e-35;10!DOID:630;1.07e-23;1!DOID:0050177;1.07e-23;1!DOID:0050427;1.07e-23;1!DOID:0060060;1.87e-23;1!DOID:0060061;1.87e-23;1!DOID:8691;1.87e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.25e-35,10;DOID:630,1.07e-23,1;DOID:0050177,1.07e-23,1;DOID:0050427,1.07e-23,1;DOID:0060060,1.67e-23,1;DOID:0060061,1.67e-23,1;DOID:8691,1.67e-23,1;DOID:2531,4.99e-11,51;DOID:0060083,4.99e-11,51 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.36e-12!7;UBERON:0002106!3.06e-08!3;UBERON:0004854!3.06e-08!3;UBERON:0009034!3.06e-08!3;UBERON:0002095!3.06e-08!3;UBERON:0004782!3.06e-08!3;UBERON:0003281!3.06e-08!3;UBERON:0009664!3.06e-08!3;UBERON:0002296!3.06e-08!3;UBERON:0005602!3.06e-08!3;UBERON:0001179!3.06e-08!3;UBERON:0006293!3.06e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.96e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.96e-09,3;UBERON:0004854,8.96e-09,3;UBERON:0009034,8.96e-09,3;UBERON:0002095,8.96e-09,3;UBERON:0004782,8.96e-09,3;UBERON:0003281,8.96e-09,3;UBERON:0009664,8.96e-09,3;UBERON:0002296,8.96e-09,3;UBERON:0005602,8.96e-09,3;UBERON:0001179,8.96e-09,3;UBERON:0006293,8.96e-09,3 | |||
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|short_description=p6@SNX11 | |short_description=p6@SNX11 | ||
}} | }} |
Latest revision as of 05:37, 25 September 2015
Short description: | p6@SNX11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SNX11_5end |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | -14bp_to_BT006723, CU674392_5end |
EntrezGene: | SNX11 |
HGNC: | 14975 |
UniProt: | Q9Y5W9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.65e-33 | 24 |
pro-B cell | 8.65e-33 | 24 |
lymphoid lineage restricted progenitor cell | 8.50e-27 | 52 |
lymphocyte | 2.73e-26 | 53 |
common lymphoid progenitor | 2.73e-26 | 53 |
antibody secreting cell | 6.40e-23 | 1 |
plasma cell | 6.40e-23 | 1 |
plasmablast | 6.40e-23 | 1 |
mature B cell | 3.62e-12 | 2 |
pre-B-II cell | 3.62e-12 | 2 |
transitional stage B cell | 3.62e-12 | 2 |
small pre-B-II cell | 3.62e-12 | 2 |
immature B cell | 3.62e-12 | 2 |
nongranular leukocyte | 6.12e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.95e-11 | 120 |
leukocyte | 4.52e-10 | 136 |
precursor B cell | 1.51e-08 | 3 |
hematopoietic oligopotent progenitor cell | 1.80e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-08 | 161 |
hematopoietic stem cell | 4.16e-08 | 168 |
hematopoietic cell | 1.11e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.96e-09 | 3 |
gastrointestinal system mesentery | 8.96e-09 | 3 |
stomach region | 8.96e-09 | 3 |
mesentery | 8.96e-09 | 3 |
gastrointestinal system serosa | 8.96e-09 | 3 |
mesentery of stomach | 8.96e-09 | 3 |
gut mesentery | 8.96e-09 | 3 |
dorsal mesentery | 8.96e-09 | 3 |
dorsal mesogastrium | 8.96e-09 | 3 |
peritoneal cavity | 8.96e-09 | 3 |
spleen primordium | 8.96e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.25e-35 | 10 |
genetic disease | 1.07e-23 | 1 |
monogenic disease | 1.07e-23 | 1 |
xeroderma pigmentosum | 1.07e-23 | 1 |
non-Hodgkin lymphoma | 1.67e-23 | 1 |
cutaneous T cell lymphoma | 1.67e-23 | 1 |
mycosis fungoides | 1.67e-23 | 1 |
hematologic cancer | 4.99e-11 | 51 |
immune system cancer | 4.99e-11 | 51 |