FFCP PHASE1:Hg19::chr17:48262782..48262783,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1277 | |EntrezGene=1277 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2197 | |HGNC=2197 | ||
|TSSclassifier=strong | |||
|UniProt=P02452 | |UniProt=P02452 | ||
|association_with_transcript=117bp_to_J00113_5end | |association_with_transcript=117bp_to_J00113_5end | ||
|cluster_id=chr17:48262782..48262783,- | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_55_at_COL1A1_5end | |description=CAGE_peak_55_at_COL1A1_5end | ||
|id=chr17:48262782..48262783,- | |id=chr17:48262782..48262783,- | ||
|ontology_enrichment_celltype=CL:0000055!2.84e-20!180;CL:0000057!1.77e-18!75;CL:0002620!1.17e-10!23;CL:0002334!2.58e-09!12;CL:0000048!4.20e-08!430;CL:0000723!1.30e-07!436;CL:0000034!5.50e-07!444 | |ontology_enrichment_celltype=CL:0000055!2.84e-20!180;CL:0000057!1.77e-18!75;CL:0002620!1.17e-10!23;CL:0002334!2.58e-09!12;CL:0000048!4.20e-08!430;CL:0000723!1.30e-07!436;CL:0000034!5.50e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.45e-11;12!CL:0002579;4.20e-10;3!CL:0000135;6.93e-10;3!CL:0000388;6.93e-10;3!CL:0002615;8.43e-10;3!CL:0002580;8.43e-10;3!CL:0000197;7.24e-09;6!CL:0000098;7.24e-09;6!CL:0002167;7.24e-09;6!CL:0002569;2.00e-08;6!CL:0002620;3.79e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.41e-12,76;CL:0002334,1.66e-11,12;CL:0000135,4.16e-10,3;CL:0000388,4.16e-10,3;CL:0002580,5.81e-10,3;CL:0002579,6.97e-10,3;CL:0002615,1.09e-09,3;CL:0000197,7.20e-09,6;CL:0000098,7.20e-09,6;CL:0002167,7.20e-09,6;CL:0002569,2.01e-08,6;CL:0002620,3.04e-07,23;CL:0002561,9.27e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!5.60e-07!5;DOID:450!5.60e-07!5;DOID:66!5.60e-07!5;DOID:423!5.60e-07!5;DOID:0080000!5.60e-07!5;DOID:11722!5.60e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;8.59e-10;5!DOID:450;8.59e-10;5!DOID:66;8.59e-10;5!DOID:423;8.59e-10;5!DOID:0080000;8.59e-10;5!DOID:11722;8.59e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.10e-10,5;DOID:450,5.10e-10,5;DOID:66,5.10e-10,5;DOID:423,5.10e-10,5;DOID:0080000,5.10e-10,5;DOID:11722,5.10e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!5.00e-09!45;UBERON:0002416!5.00e-09!45;UBERON:0003688!1.59e-08!6;UBERON:0002358!1.59e-08!6;UBERON:0003684!1.59e-08!6;UBERON:0001178!1.59e-08!6;UBERON:0002097!8.01e-08!40;UBERON:0004457!2.85e-07!12;UBERON:0000042!2.85e-07!12;UBERON:0000914!9.81e-07!83;UBERON:0002329!9.81e-07!83;UBERON:0003077!9.81e-07!83;UBERON:0003059!9.81e-07!83;UBERON:0007282!9.81e-07!83;UBERON:0009618!9.81e-07!83;UBERON:0007285!9.81e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.45e-18;6!UBERON:0002358;3.45e-18;6!UBERON:0003684;3.45e-18;6!UBERON:0001178;3.45e-18;6!UBERON:0004457;4.91e-16;9!UBERON:0000042;4.91e-16;9!UBERON:0003104;4.40e-11;7!UBERON:0009142;4.40e-11;7!UBERON:0007846;6.93e-10;3!UBERON:0000043;6.93e-10;3!UBERON:0007845;6.93e-10;3!UBERON:0002199;6.88e-09;46!UBERON:0002416;6.88e-09;46!UBERON:0003422;2.00e-08;6!UBERON:0002097;1.53e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.36e-18,6;UBERON:0002358,7.36e-18,6;UBERON:0003684,7.36e-18,6;UBERON:0001178,7.36e-18,6;UBERON:0004457,1.53e-11,12;UBERON:0000042,1.53e-11,12;UBERON:0002199,3.37e-11,46;UBERON:0002416,3.37e-11,46;UBERON:0007846,4.16e-10,3;UBERON:0000043,4.16e-10,3;UBERON:0007845,4.16e-10,3;UBERON:0002097,1.39e-09,41;UBERON:0003422,2.01e-08,6;UBERON:0003102,3.87e-07,99;UBERON:0005933,9.27e-07,2;UBERON:0005942,9.27e-07,2;UBERON:0005932,9.27e-07,2 | |||
|phase1_expression=0.908391896352783,0.642301571672949,1.40954404095971,3.00219895059391,2.23480547213644,0,2.53299878168311,0,0,0,0,0.218441372130172,0.263766978228454,0.247532705920093,0,0,0,0.730310090387373,0.487932798790507,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.579386075843295,1.5905718941022,0,0.189069634328136,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,4.47274756525787,0.759783069987479,0.132409180813219,0,0,0,0,1.2333377420858,0,0,0.163461903113459,0.302714855289863,1.15235184896,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,2.47266929278557,0,0.718618141816238,0.336672227908132,0,0,0.438977620880838,0,0.150238058906597,0.226864366320042,3.22901344239952,2.34913127700424,1.69545520927649,1.80054657650641,0.515262646192195,1.54584324027377,0.744467425326359,3.03797398034279,0.194874010322397,2.52433774244115,3.03764665519588,0.161646056818812,0.710019185033229,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,1.85747171212792,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.22001485746285,1.29271715757778,0,0.845302752556,0.797814349754612,0,0.514414748524284,0,0,2.00169191121407,4.34097284313154,0.823240336780769,0.977208552881205,0.355391948742546,0,0.602878754119172,0,0,0,0,0,2.63587341040741,2.29723871668228,0,0,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,0,0,8.11086359970148,11.2410262942212,5.36188211115378,1.40569697991256,0.300946099727719,2.27407504055985,1.03473071292505,3.32112799267718,0.184369168541703,0.60818530127658,0.391602314925481,0.686286847621712,0,0,0,0,0,0.604780586659361,1.48864684691266,2.60885354589706,3.64858122762996,3.07533958213682,1.02341449813341,6.11244900345709,0,0.308419387605311,1.24293207719189,0.574890092096664,0.519254429183621,0,0,0,0,1.03333003348146,0.364182336013434,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0.966782203814463,0.145016693914229,0.170453254832202,0.979352392114111,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0.54907405947211,0.589062011728432,0.202182481573316,0,0,0.48763373908959,0.487426979262569,0,0,2.82810863907426,0,0,0,0,0.578775534266688,1.31178950409327,0,0,0.281695602532241,0.860468113224309,1.17898849215745,0,0.354761064070598,0.211107635297664,2.30506425071931,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21031058919516,0,0,0,0,0,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0.0882561266915003,3.84167259326905,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0.326587360109409,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19403842309499,0.233713309847224,0,0,0,0.889811221596536,0,0,0.932623203496683,0,0.159296767163702,0.449803112163605,0.310525913752519,0,0,0.521745061811734,1.95334891696384,1.52322084867518,0,0,0.429642228169954,0,1.59238355479446,0.400027764663154,1.71697852591396,0.336749488765919,1.26184898228651,0,0.214441591374926,0,0.226705925512272,0.231522474323834,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,5.64281509905094,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0.198916222116275,0.150420656698515,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,23.7998386598978,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0.8453114551668,0.339854229375634,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0,4.46394021800102,1.84870251452567,2.59575937274273,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,1.1903221573187,0,0,0.112131862580613,0,1.0105859447911,0,1.02669990325584,0,0,2.32862249582209,0,0,0,0,0,0.122241444182866,1.22068853494722,0,0,0 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| ||
|short_description=p55@COL1A1 | |short_description=p55@COL1A1 | ||
}} | }} |
Latest revision as of 23:31, 15 September 2015
Short description: | p55@COL1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_55_at_COL1A1_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | 117bp_to_J00113_5end |
EntrezGene: | COL1A1 |
HGNC: | 2197 |
UniProt: | P02452 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.41e-12 | 76 |
preadipocyte | 1.66e-11 | 12 |
fibrocyte | 4.16e-10 | 3 |
tendon cell | 4.16e-10 | 3 |
preadipocyte of the breast | 5.81e-10 | 3 |
omentum preadipocyte | 6.97e-10 | 3 |
adipocyte of omentum tissue | 1.09e-09 | 3 |
receptor cell | 7.20e-09 | 6 |
sensory epithelial cell | 7.20e-09 | 6 |
olfactory epithelial cell | 7.20e-09 | 6 |
mesenchymal stem cell of umbilical cord | 2.01e-08 | 6 |
skin fibroblast | 3.04e-07 | 23 |
outer root sheath cell | 9.27e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.36e-18 | 6 |
peritoneum | 7.36e-18 | 6 |
abdominal cavity | 7.36e-18 | 6 |
visceral peritoneum | 7.36e-18 | 6 |
cavity lining | 1.53e-11 | 12 |
serous membrane | 1.53e-11 | 12 |
integument | 3.37e-11 | 46 |
integumental system | 3.37e-11 | 46 |
dense regular connective tissue | 4.16e-10 | 3 |
tendon | 4.16e-10 | 3 |
regular connective tissue | 4.16e-10 | 3 |
skin of body | 1.39e-09 | 41 |
mesenchyme of umbilical cord | 2.01e-08 | 6 |
surface structure | 3.87e-07 | 99 |
hair root sheath | 9.27e-07 | 2 |
hair outer root sheath | 9.27e-07 | 2 |
bulb of hair follicle | 9.27e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.10e-10 | 5 |
myotonic disease | 5.10e-10 | 5 |
muscle tissue disease | 5.10e-10 | 5 |
myopathy | 5.10e-10 | 5 |
muscular disease | 5.10e-10 | 5 |
myotonic dystrophy | 5.10e-10 | 5 |