FFCP PHASE1:Hg19::chr12:32259890..32259893,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=636 | |EntrezGene=636 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1049 | |HGNC=1049 | ||
|TSSclassifier=strong | |||
|UniProt=F8VZX7 | |UniProt=F8VZX7 | ||
|association_with_transcript=71bp_to_ENST00000550207_5end | |association_with_transcript=71bp_to_ENST00000550207_5end | ||
|cluster_id=chr12:32259890..32259893,+ | |||
|description=CAGE_peak_10_at_BICD1_5end | |description=CAGE_peak_10_at_BICD1_5end | ||
|id=chr12:32259890..32259893,+ | |id=chr12:32259890..32259893,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.24e-11;7!CL:0000586;2.24e-11;7!CL:0002593;2.60e-10;2!CL:0000784;2.71e-07;3!CL:0002592;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.42e-11,7;CL:0000586,2.42e-11,7;CL:0002593,2.72e-10,2;CL:0002592,2.32e-07,3;CL:0000784,2.47e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.08e-08;10!UBERON:0005564;3.08e-08;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.80e-10!69;UBERON:0006238!1.80e-10!69;UBERON:0001017!1.41e-09!82;UBERON:0002616!1.53e-09!59;UBERON:0001049!2.07e-09!57;UBERON:0005068!2.07e-09!57;UBERON:0006241!2.07e-09!57;UBERON:0007135!2.07e-09!57;UBERON:0005743!1.20e-08!86;UBERON:0002780!2.52e-08!41;UBERON:0001890!2.52e-08!41;UBERON:0006240!2.52e-08!41;UBERON:0000073!5.20e-08!94;UBERON:0001016!5.20e-08!94;UBERON:0003080!5.61e-08!42;UBERON:0001869!5.05e-07!32;UBERON:0001893!5.12e-07!34;UBERON:0002619!7.63e-07!22;UBERON:0001950!7.81e-07!20 | |ontology_enrichment_uberon=UBERON:0000955!1.80e-10!69;UBERON:0006238!1.80e-10!69;UBERON:0001017!1.41e-09!82;UBERON:0002616!1.53e-09!59;UBERON:0001049!2.07e-09!57;UBERON:0005068!2.07e-09!57;UBERON:0006241!2.07e-09!57;UBERON:0007135!2.07e-09!57;UBERON:0005743!1.20e-08!86;UBERON:0002780!2.52e-08!41;UBERON:0001890!2.52e-08!41;UBERON:0006240!2.52e-08!41;UBERON:0000073!5.20e-08!94;UBERON:0001016!5.20e-08!94;UBERON:0003080!5.61e-08!42;UBERON:0001869!5.05e-07!32;UBERON:0001893!5.12e-07!34;UBERON:0002619!7.63e-07!22;UBERON:0001950!7.81e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;2.60e-10;2!UBERON:0000473;4.52e-10;8!UBERON:0003135;1.44e-07;11!UBERON:0003498;2.71e-07;3!UBERON:0005985;2.71e-07;3!UBERON:0001621;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,2.72e-10,2;UBERON:0000473,4.84e-10,8;UBERON:0003135,1.51e-07,11;UBERON:0001621,2.32e-07,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.251085279189606,0,0,0.0787107813136792,0,0.383829398097213,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.764546456250458,1.32171328579026,0.560508562981536,0,0,0,0.205601498999509,0,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,0.403213486449465,0.802320587350522,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.0654895377488563,0,0,0,0,0,0.953962497221368,0,1.48583000531826,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0.18611685633159,0.337552664482532,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.609868530647977,0.530119073285941,0.116193942869518,0.10366105501537,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,2.31986643833309,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.170453254832202,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0,0.404364963146632,1.58510321173008,0.421258456238981,0.975267478179181,0,1.05650146756755,0,0,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0.0711418433484141,0.159426272728822,0,0,0.211673582723883,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0,0,0,0.562677665642051,0,0,0,0,0,0,0.511343412510774,0.123084805461069,0,0,0.179021174675609,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0.254253650292766,0,0,0,0.868124974666461,0,0,0,0.221158519862449,0.591095237907095,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0.210998064528027,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0,0,0.91821828489147,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0.19871461170299,0.253243183823515,0,0,0,0,0.144090417154106,0.114536596165916,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0.202210631562555,0.196854963029498,0.0846733320657845,0,0.136203406111576,0.643012593860077,0.275078873194468,0,0,0,0.425246896606173,0,0.0788057072991982,0.104909176269996,0.528001682597033,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.248385611765534,0.553394539744923,0,0,0.285465333544967,0,0,0,0.149254802886874,0,0.554805861502613,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0.512483037175893,0.345430341731199,0,0.414775308455192,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.615349092722265,1.00828678488687,0.276629009856872,0.161475645631851,0,0.0981477185010256,0.11796972334774,0,0,0.381382095467167,0,0,0.0752103283492573,0.60511520611056,0,0.261906694481422,0,0,0.337687923091973,0,0,0.253663240775627,0.546974809018219,0,0,0,0,0,0,0,0.682986574053893,0.177404740325278,0,0,0.271878931907327,0.328863867814245,0,0,0,0.471346769748006,0.280272163313789,0,0,0,0,0,0.464965701472501,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.335566295393377,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0.11294608203896,0.329821550236287,0.150962843566674,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0,0,0.352894871715692,0.160482733378337,0.730336388246517,0,0,0,0.0679914901909147,0.872701380680755,0,0.371995018166751,0,0,0.378499274505237,0.109265571963696,0,0.815910637935854,4.80991329478009,1.01084389488329,0.50141507858475,0.0757786982182394,0,0.829169439458779,0.103432995861895,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.251085279189606,0,0,0.0787107813136792,0,0.383829398097213,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.764546456250458,1.32171328579026,0.560508562981536,0,0,0,0.205601498999509,0,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,0.403213486449465,0.802320587350522,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.0654895377488563,0,0,0,0,0,0.953962497221368,0,1.48583000531826,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0.18611685633159,0.337552664482532,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.609868530647977,0.530119073285941,0.116193942869518,0.10366105501537,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,2.31986643833309,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.170453254832202,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0,0.404364963146632,1.58510321173008,0.421258456238981,0.975267478179181,0,1.05650146756755,0,0,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0.0711418433484141,0.159426272728822,0,0,0.211673582723883,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0,0,0,0.562677665642051,0,0,0,0,0,0,0.511343412510774,0.123084805461069,0,0,0.179021174675609,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0.254253650292766,0,0,0,0.868124974666461,0,0,0,0.221158519862449,0.591095237907095,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0.210998064528027,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0,0,0.91821828489147,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0.19871461170299,0.253243183823515,0,0,0,0,0.144090417154106,0.114536596165916,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0.202210631562555,0.196854963029498,0.0846733320657845,0,0.136203406111576,0.643012593860077,0.275078873194468,0,0,0,0.425246896606173,0,0.0788057072991982,0.104909176269996,0.528001682597033,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.248385611765534,0.553394539744923,0,0,0.285465333544967,0,0,0,0.149254802886874,0,0.554805861502613,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0.512483037175893,0.345430341731199,0,0.414775308455192,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.615349092722265,1.00828678488687,0.276629009856872,0.161475645631851,0,0.0981477185010256,0.11796972334774,0,0,0.381382095467167,0,0,0.0752103283492573,0.60511520611056,0,0.261906694481422,0,0,0.337687923091973,0,0,0.253663240775627,0.546974809018219,0,0,0,0,0,0,0,0.682986574053893,0.177404740325278,0,0,0.271878931907327,0.328863867814245,0,0,0,0.471346769748006,0.280272163313789,0,0,0,0,0,0.464965701472501,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.335566295393377,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0.11294608203896,0.329821550236287,0.150962843566674,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0,0,0.352894871715692,0.160482733378337,0.730336388246517,0,0,0,0.0679914901909147,0.872701380680755,0,0.371995018166751,0,0,0.378499274505237,0.109265571963696,0,0.815910637935854,4.80991329478009,1.01084389488329,0.50141507858475,0.0757786982182394,0,0.829169439458779,0.103432995861895,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@BICD1 | |short_description=p10@BICD1 | ||
}} | }} |
Latest revision as of 04:40, 18 September 2015
Short description: | p10@BICD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_BICD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 71bp_to_ENST00000550207_5end |
EntrezGene: | BICD1 |
HGNC: | 1049 |
UniProt: | F8VZX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.42e-11 | 7 |
germ cell | 2.42e-11 | 7 |
smooth muscle cell of the internal thoracic artery | 2.72e-10 | 2 |
smooth muscle cell of the coronary artery | 2.32e-07 | 3 |
plasmacytoid dendritic cell | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 2.72e-10 | 2 |
testis | 4.84e-10 | 8 |
male reproductive organ | 1.51e-07 | 11 |
coronary artery | 2.32e-07 | 3 |