FFCP PHASE1:Hg19::chr12:3600112..3600125,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56341 | |EntrezGene=56341 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5188 | |HGNC=5188 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NR22 | |UniProt=Q9NR22 | ||
|association_with_transcript=-276bp_to_ENST00000382622_5end | |association_with_transcript=-276bp_to_ENST00000382622_5end | ||
|cluster_id=chr12:3600112..3600125,+ | |||
|coexpression_cluster_id=C441 | |||
|description=CAGE_peak_6_at_PRMT8_5end | |description=CAGE_peak_6_at_PRMT8_5end | ||
|id=chr12:3600112..3600125,+ | |id=chr12:3600112..3600125,+ | ||
|ontology_enrichment_celltype=CL:0002623!2.28e-12!3;CL:0002327!7.06e-09!4;CL:0000622!1.48e-07!5;CL:0000312!4.80e-07!5 | |ontology_enrichment_celltype=CL:0002623!2.28e-12!3;CL:0002327!7.06e-09!4;CL:0000622!1.48e-07!5;CL:0000312!4.80e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002623;1.72e-66;3!CL:0000622;2.72e-40;5!CL:0000154;9.92e-34;6!CL:0000150;9.01e-23;9!CL:0000197;1.41e-15;6!CL:0000098;1.41e-15;6!CL:0002167;1.41e-15;6!CL:0002251;1.21e-10;20!CL:0002327;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,9.82e-67,3;CL:0000622,1.95e-40,5;CL:0000154,7.51e-34,6;CL:0000150,7.49e-23,9;CL:0000197,1.31e-15,6;CL:0000098,1.31e-15,6;CL:0002167,1.31e-15,6;CL:0002251,1.12e-10,20;CL:0002327,8.61e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;1.06e-23;1!DOID:3149;1.06e-23;1!DOID:3451;1.48e-12;2!DOID:4159;1.48e-12;2!DOID:0060122;1.48e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.07e-23,1;DOID:3149,1.07e-23,1;DOID:3451,1.48e-12,2;DOID:4159,1.48e-12,2;DOID:0060122,1.48e-12,2 | |||
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| ||
|short_description=p6@PRMT8 | |short_description=p6@PRMT8 | ||
}} | }} |
Latest revision as of 05:41, 18 September 2015
Short description: | p6@PRMT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PRMT8_5end |
Coexpression cluster: | C441_keratoacanthoma_skin_tongue_esophagus_cervical_salivary_Sebocyte |
Association with transcript: | -276bp_to_ENST00000382622_5end |
EntrezGene: | PRMT8 |
HGNC: | 5188 |
UniProt: | Q9NR22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 9.82e-67 | 3 |
acinar cell | 1.95e-40 | 5 |
protein secreting cell | 7.51e-34 | 6 |
glandular epithelial cell | 7.49e-23 | 9 |
receptor cell | 1.31e-15 | 6 |
sensory epithelial cell | 1.31e-15 | 6 |
olfactory epithelial cell | 1.31e-15 | 6 |
epithelial cell of alimentary canal | 1.12e-10 | 20 |
mammary gland epithelial cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 7.51e-34 | 6 |
gland of oral region | 7.51e-34 | 6 |
gland of foregut | 7.51e-34 | 6 |
oral gland | 7.51e-34 | 6 |
oral cavity | 7.51e-34 | 6 |
gland of gut | 1.20e-20 | 10 |
exocrine gland | 7.57e-12 | 31 |
exocrine system | 7.57e-12 | 31 |
oral opening | 9.12e-10 | 22 |
mouth | 1.49e-07 | 29 |
stomodeum | 1.49e-07 | 29 |
zone of skin | 6.50e-07 | 4 |
mammary gland | 8.61e-07 | 4 |
mammary bud | 8.61e-07 | 4 |
mammary ridge | 8.61e-07 | 4 |
mammary placode | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.07e-23 | 1 |
keratoacanthoma | 1.07e-23 | 1 |
skin carcinoma | 1.48e-12 | 2 |
skin cancer | 1.48e-12 | 2 |
integumentary system cancer | 1.48e-12 | 2 |