FFCP PHASE1:Hg19::chr12:5198401..5198415,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:5198401..5198415,+ | |||
|coexpression_cluster_id=C182 | |||
|description=CAGE_peak_at_chr12:5198401..5198415,+ | |description=CAGE_peak_at_chr12:5198401..5198415,+ | ||
|id=chr12:5198401..5198415,+ | |id=chr12:5198401..5198415,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.33e-14!10;CL:0000541!1.33e-14!10;CL:0000147!1.99e-14!14;CL:0000346!5.72e-09!3;CL:1000428!5.72e-09!3;CL:0002567!6.94e-09!3;CL:0000333!1.57e-07!41;CL:0002566!2.36e-07!1;CL:0000710!3.70e-07!20;CL:0000864!5.37e-07!1;CL:0000091!5.37e-07!1;CL:0002559!6.39e-07!4;CL:0002598!7.15e-07!1;CL:0000319!8.02e-07!1 | |ontology_enrichment_celltype=CL:0000148!1.33e-14!10;CL:0000541!1.33e-14!10;CL:0000147!1.99e-14!14;CL:0000346!5.72e-09!3;CL:1000428!5.72e-09!3;CL:0002567!6.94e-09!3;CL:0000333!1.57e-07!41;CL:0002566!2.36e-07!1;CL:0000710!3.70e-07!20;CL:0000864!5.37e-07!1;CL:0000091!5.37e-07!1;CL:0002559!6.39e-07!4;CL:0002598!7.15e-07!1;CL:0000319!8.02e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000346;3.75e-53;3!CL:1000428;3.75e-53;3!CL:0002566;1.81e-40;1!CL:0002559;1.99e-32;5!CL:0000148;8.13e-17;10!CL:0002567;1.71e-14;3!CL:0000147;2.51e-12;14!CL:0000710;6.17e-09;20!CL:0000075;7.24e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.87e-53,3;CL:1000428,2.87e-53,3;CL:0002566,1.48e-40,1;CL:0002559,1.70e-32,5;CL:0000148,8.81e-17,10;CL:0000541,8.81e-17,10;CL:0000333,2.26e-15,41;CL:0002567,2.09e-14,3;CL:0000147,2.66e-12,14;CL:0000133,4.78e-11,59;CL:0000221,3.20e-09,72;CL:0000710,6.42e-09,20;CL:0000075,7.45e-07,27 | |||
|ontology_enrichment_development_v019=CL:0000133;2.82e-08;59 | |||
|ontology_enrichment_disease=DOID:5662!3.78e-07!1;DOID:3571!5.37e-07!1;DOID:3030!8.02e-07!1 | |ontology_enrichment_disease=DOID:5662!3.78e-07!1;DOID:3571!5.37e-07!1;DOID:3030!8.02e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000412!5.72e-09!3;UBERON:0001992!5.72e-09!3;UBERON:0002073!6.39e-07!4;UBERON:0005086!6.39e-07!4 | |ontology_enrichment_uberon=UBERON:0000412!5.72e-09!3;UBERON:0001992!5.72e-09!3;UBERON:0002073!6.39e-07!4;UBERON:0005086!6.39e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;3.75e-53;3!UBERON:0001992;3.75e-53;3!UBERON:0002073;1.99e-32;5!UBERON:0002067;1.48e-18;9!UBERON:0001003;1.42e-11;15!UBERON:0007376;1.42e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,2.87e-53,3;UBERON:0001992,2.87e-53,3;UBERON:0002073,1.70e-32,5;UBERON:0005086,1.70e-32,5;UBERON:0002067,1.35e-18,9;UBERON:0004016,1.35e-18,9;UBERON:0010083,1.35e-18,9;UBERON:0001003,1.34e-11,15;UBERON:0007376,1.34e-11,15;UBERON:0007383,1.34e-11,15 | |||
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|short_description=p@chr12:5198401..5198415,+ | |short_description=p@chr12:5198401..5198415,+ | ||
}} | }} |
Latest revision as of 09:22, 24 July 2015
Short description: | p@chr12:5198401..5198415, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:5198401..5198415, + |
Coexpression cluster: | C182_renal_mature_mesothelioma_lung_Mammary_Adipocyte_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.87e-53 | 3 |
stem cell of epidermis | 2.87e-53 | 3 |
dark melanocyte | 1.48e-40 | 1 |
hair follicle cell | 1.70e-32 | 5 |
melanocyte | 8.81e-17 | 10 |
melanoblast | 8.81e-17 | 10 |
migratory neural crest cell | 2.26e-15 | 41 |
light melanocyte | 2.09e-14 | 3 |
pigment cell | 2.66e-12 | 14 |
neurectodermal cell | 4.78e-11 | 59 |
ectodermal cell | 3.20e-09 | 72 |
neurecto-epithelial cell | 6.42e-09 | 20 |
columnar/cuboidal epithelial cell | 7.45e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.87e-53 | 3 |
papillary layer of dermis | 2.87e-53 | 3 |
hair follicle | 1.70e-32 | 5 |
hair follicle placode | 1.70e-32 | 5 |
dermis | 1.35e-18 | 9 |
dermatome | 1.35e-18 | 9 |
future dermis | 1.35e-18 | 9 |
skin epidermis | 1.34e-11 | 15 |
outer epithelium | 1.34e-11 | 15 |
enveloping layer of ectoderm | 1.34e-11 | 15 |