FFCP PHASE1:Hg19::chr12:56351157..56351164,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6490 | |EntrezGene=6490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10880 | |HGNC=10880 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_ENST00000549564_5end | |association_with_transcript=-31bp_to_ENST00000549564_5end | ||
|cluster_id=chr12:56351157..56351164,- | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_22_at_PMEL_5end | |description=CAGE_peak_22_at_PMEL_5end | ||
|id=chr12:56351157..56351164,- | |id=chr12:56351157..56351164,- | ||
|ontology_enrichment_celltype=CL:0000148!1.67e-69!10;CL:0000541!1.67e-69!10;CL:0000147!1.66e-64!14;CL:0000710!1.24e-34!20;CL:0000075!1.44e-25!27;CL:0000325!7.82e-23!39;CL:0002077!7.54e-21!33;CL:0002567!3.32e-20!3;CL:0000333!6.70e-16!41;CL:0002566!1.34e-15!1;CL:0000149!2.22e-15!4;CL:0000133!2.46e-14!59;CL:0000221!7.29e-12!71 | |ontology_enrichment_celltype=CL:0000148!1.67e-69!10;CL:0000541!1.67e-69!10;CL:0000147!1.66e-64!14;CL:0000710!1.24e-34!20;CL:0000075!1.44e-25!27;CL:0000325!7.82e-23!39;CL:0002077!7.54e-21!33;CL:0002567!3.32e-20!3;CL:0000333!6.70e-16!41;CL:0002566!1.34e-15!1;CL:0000149!2.22e-15!4;CL:0000133!2.46e-14!59;CL:0000221!7.29e-12!71 | ||
|ontology_enrichment_celltype_v019=CL:0000148;5.07e-101;10!CL:0000147;2.34e-72;14!CL:0000710;7.76e-51;20!CL:0002567;1.80e-38;3!CL:0000075;8.48e-38;27!CL:0002566;3.16e-29;1!CL:0002077;1.72e-25;34!CL:0000149;1.70e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.02e-101,10;CL:0000541,6.02e-101,10;CL:0000147,2.65e-72,14;CL:0000710,8.47e-51,20;CL:0002567,1.80e-38,3;CL:0000075,9.04e-38,27;CL:0002077,4.29e-30,34;CL:0002566,4.20e-29,1;CL:0000333,6.92e-24,41;CL:0000133,6.05e-17,59;CL:0000221,5.08e-14,72;CL:0000149,1.70e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000221;2.93e-08;72!CL:0000133;5.78e-08;59 | |||
|ontology_enrichment_disease=DOID:1909!2.96e-29!2 | |ontology_enrichment_disease=DOID:1909!2.96e-29!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;2.37e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.05e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0000966!3.54e-12!5;UBERON:0005388!3.54e-12!5;UBERON:0001802!3.54e-12!5;UBERON:0000970!6.70e-07!20 | |ontology_enrichment_uberon=UBERON:0000966!3.54e-12!5;UBERON:0005388!3.54e-12!5;UBERON:0001802!3.54e-12!5;UBERON:0000970!6.70e-07!20 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p22@PMEL | |short_description=p22@PMEL | ||
}} | }} |
Latest revision as of 09:07, 19 September 2015
Short description: | p22@PMEL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_PMEL_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -31bp_to_ENST00000549564_5end |
EntrezGene: | PMEL |
HGNC: | 10880 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.02e-101 | 10 |
melanoblast | 6.02e-101 | 10 |
pigment cell | 2.65e-72 | 14 |
neurecto-epithelial cell | 8.47e-51 | 20 |
light melanocyte | 1.80e-38 | 3 |
columnar/cuboidal epithelial cell | 9.04e-38 | 27 |
ecto-epithelial cell | 4.29e-30 | 34 |
dark melanocyte | 4.20e-29 | 1 |
migratory neural crest cell | 6.92e-24 | 41 |
neurectodermal cell | 6.05e-17 | 59 |
ectodermal cell | 5.08e-14 | 72 |
visual pigment cell | 1.70e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.05e-15 | 2 |