FFCP PHASE1:Hg19::chr11:107729504..107729539,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:107729504..107729539,-
|short_description=p1@SLC35F2
|description=CAGE_peak_1_at_SLC35F2_5end
|association_with_transcript=0bp_to_ENST00000265836,ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54733 | |EntrezGene=54733 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23615 | |HGNC=23615 | ||
|UniProt=Q8IXU6, | |TSSclassifier=strong | ||
|UniProt=Q8IXU6,E9PKZ2,E9PRY2 | |||
|association_with_transcript=0bp_to_ENST00000265836,ENST00000524991,ENST00000533664_5end | |||
|cluster_id=chr11:107729504..107729539,- | |||
|description=CAGE_peak_1_at_SLC35F2_5end | |||
|id=chr11:107729504..107729539,- | |||
|ontology_enrichment_celltype=CL:0000066!1.61e-31!254;CL:0000076!1.49e-11!62;CL:0002139!1.64e-11!24;CL:0000115!6.23e-10!35;CL:0002321!7.04e-10!248;CL:0002078!9.60e-10!44;CL:0000220!1.41e-09!246;CL:0000071!1.84e-09!18;CL:0002546!1.84e-09!18;CL:0000213!2.84e-09!57;CL:0000215!2.84e-09!57;CL:0002076!3.26e-09!43;CL:0000945!3.14e-08!24;CL:0000826!3.14e-08!24;CL:0000012!2.73e-07!682;CL:0000223!3.75e-07!59;CL:0000063!5.12e-07!578;CL:0000548!6.27e-07!679;CL:0000004!6.27e-07!679;CL:0000255!6.27e-07!679;CL:0000542!6.81e-07!53;CL:0000051!6.81e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.42e-11;24!CL:0000071;1.64e-09;18!CL:0000115;5.42e-09;36!CL:0000945;3.22e-08;24!CL:0002076;2.74e-07;42!CL:0002078;5.76e-07;45!CL:0000213;8.83e-07;58!CL:0000215;8.83e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.12e-32,253;CL:0002139,1.60e-11,24;CL:0000076,5.70e-11,63;CL:0000115,1.81e-10,36;CL:0002078,2.96e-10,45;CL:0002321,4.82e-10,250;CL:0002076,7.91e-10,42;CL:0000213,9.72e-10,58;CL:0000215,9.72e-10,58;CL:0000071,1.80e-09,18;CL:0002546,1.80e-09,18;CL:0000945,3.08e-08,24;CL:0000826,3.08e-08,24;CL:0000223,1.22e-07,58;CL:0000542,6.71e-07,53;CL:0000051,6.71e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002546;1.64e-09;18 | |||
|ontology_enrichment_disease=DOID:162!9.68e-23!235;DOID:14566!4.55e-22!239;DOID:0050687!8.85e-14!143;DOID:305!4.57e-12!106;DOID:0050686!3.19e-10!137;DOID:2531!7.29e-08!51;DOID:0060083!7.29e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.55e-23,235;DOID:14566,3.57e-22,239;DOID:0050687,9.02e-14,143;DOID:305,5.11e-12,106;DOID:0050686,2.49e-10,137;DOID:2531,5.54e-08,51;DOID:0060083,5.54e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0000487!2.70e-10!22;UBERON:0001986!1.84e-09!18;UBERON:0004638!1.84e-09!18;UBERON:0004852!1.84e-09!18;UBERON:0006914!8.22e-08!25;UBERON:0000464!6.66e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;2.69e-10;22!UBERON:0004638;1.64e-09;18!UBERON:0001986;1.64e-09;18!UBERON:0004852;1.64e-09;18!UBERON:0000490;3.84e-09;33!UBERON:0006914;7.21e-08;25!UBERON:0006554;2.01e-07;30!UBERON:0001008;2.01e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000487,2.63e-10,22;UBERON:0004638,1.80e-09,18;UBERON:0001986,1.80e-09,18;UBERON:0004852,1.80e-09,18;UBERON:0006914,7.96e-08,25 | |||
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| ||
|short_description=p1@SLC35F2 | |||
}} | }} |
Latest revision as of 22:53, 24 September 2015
Short description: | p1@SLC35F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC35F2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000265836, ENST00000524991, ENST00000533664_5end |
EntrezGene: | SLC35F2 |
HGNC: | 23615 |
UniProt: | Q8IXU6E9PKZ2E9PRY2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.12e-32 | 253 |
endothelial cell of vascular tree | 1.60e-11 | 24 |
squamous epithelial cell | 5.70e-11 | 63 |
endothelial cell | 1.81e-10 | 36 |
meso-epithelial cell | 2.96e-10 | 45 |
embryonic cell | 4.82e-10 | 250 |
endo-epithelial cell | 7.91e-10 | 42 |
lining cell | 9.72e-10 | 58 |
barrier cell | 9.72e-10 | 58 |
blood vessel endothelial cell | 1.80e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.80e-09 | 18 |
lymphocyte of B lineage | 3.08e-08 | 24 |
pro-B cell | 3.08e-08 | 24 |
endodermal cell | 1.22e-07 | 58 |
lymphocyte | 6.71e-07 | 53 |
common lymphoid progenitor | 6.71e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
simple squamous epithelium | 2.63e-10 | 22 |
blood vessel endothelium | 1.80e-09 | 18 |
endothelium | 1.80e-09 | 18 |
cardiovascular system endothelium | 1.80e-09 | 18 |
squamous epithelium | 7.96e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.55e-23 | 235 |
disease of cellular proliferation | 3.57e-22 | 239 |
cell type cancer | 9.02e-14 | 143 |
carcinoma | 5.11e-12 | 106 |
organ system cancer | 2.49e-10 | 137 |
hematologic cancer | 5.54e-08 | 51 |
immune system cancer | 5.54e-08 | 51 |